Naga_100007g70, gene1455 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g70
Unique Namegene1455
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:804694..811448 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g70
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:804694..811448 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005886plasma membrane
GO:0005794Golgi apparatus
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005198structural molecule activity
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL086ngnoL086Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02520NO01G02520Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1508rna1508-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1508rna1508Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1508

>rna1508-protein ID=rna1508-protein|Name=rna1508|organism=Nannochloropsis gaditana|type=polypeptide|length=1747bp
MAQHPIVLLELLDLPALGVNPEAVKFGSTTMESDKFIVTCETVGEQQNVV
MVDLEANNAVTRRPISAEAAIMNPVSKVLALRAGTQLQIFNLELRAKMKS
YQTPDPIIFWRWVTPNTIALVTQNGVYHWSIEGDAPPVKLEKFDVFPEGT
QVISYKLSGDGKWALLVGISAGANGVIDGRIHLYSIEKSRYQQLHGHAGC
FATIKVPGRTDPAQVLIFEEKKPEQAAKLFVMEVGRDKDSPGGVFRLQPQ
QIQFPAEAPNDFPVSMTSAPGQDIIFMITRMGYLFLFDIHTGKTIYRTPN
RIAKDTVFATTTQDVSAGVLGITARSGKVLQMNINEQTIVPYIVQVLRDN
QLAIDIARRLNVPGARDLYVQEFNKLLAQGDAAGAARLAAESPQGILRTQ
DTIDRFKQIPAMAGAPQPIFQYFSILLEVGPLNKSESLQLVELAQGRTQL
IEKWLTEDKLEASEELGDLLYPVDSNLALSVYIRAAVPEKAINCFLQRGE
FDKIVAYAQKVGYRADYTHLLQNLVRAHPQGAVDFAKRLVANEQGPLIDT
QAVVDIFMSLNRVQETTAFLLEALKGNKREEGHLQTKLLEIILLSGNPQF
AEAILQNEMFSHYDRAVVAKLCEQAGLFQRALEHYTNLVDIKRIMAKGSS
ALSPDFLLGFFGKLNKDTTLECLNDLLGANLRQNLQLVVQVATKYSEQLG
AGALIKLFEKFKSFEGLYYYLSAIVNTSQEPVVHFKYIEAAAKLGQLKEV
ERVCRDSTVYNPQEVKTFLMDAKLPDPKPLIYVCDRHGFIEEMTGYLYTN
NLKKYIEVYVQKVSPTKTPQVVGKLLDLDCNEDFVRMLLQSIGIACPVEE
LVEQVERRNRLRIAQPWLESLVATGNTETATHNAIGKIYITLNRDPVNFL
KNNQFYDPLVIGKYCEKLDPSLAFLAYQRGGGACDDDLIRVTNENGLFKD
QARYLIEKRDGDLWAKVLSEENQHRRALIDQVVQTALPETETAEQVSETV
KAFMAADLSVELIELLERIVLHGSKFSNTRSLQNLLILTAIKSEKDRVQD
YINRLDNFDGPEIAKIAASEQYELYEEAFAIYVKFAKAAKNAEERGSLNR
AACEVLVDNLRALDRAKAFAERINEPEVWSKLAKAQLDDDNVHEAVNSYI
KANDPAHYSDVIAVAQRYGAFEDLVRYLKMVRKQIKEPHVDTEYIYSLAK
TGKLPELEEFIAAPNVANIQSIGERLFDEGNYEAAKLLFNNINNNSKLAL
CFINLNQYREAVDAAQKANSISTWKEVNIACVKVGEFRLAAICGLHIIVH
PDHLEELIQHYERAGHPKELMQLLEQGLGLEGAHSGIFTELGILYSKYLP
EKLMEHLKIFHNRMNVPKMLRACEKALLWDETVYLYKEDGQPDNAVKTMI
EHPIAFYHELFLDCIQKARNQEVYYRAIAFYLEQQPMLLERLLTLLTPNL
DHARVVHQLRRAENLPLVLPYLKSVQKENISVVNEALNELYIDDEDYTAL
RESIDSYDNFDQIALAVRIENHELLEFRRLAAALYRKNKRWAQSVSLSKA
DKMYKDAIDTAAQSGDGDLVEELLRFFVSVQDRECFAAVLFTCYELIRPD
VALELAWRNNYYDFFMPYIIQYLRHAHERIKALEARTASLDVAHKEAENS
AAAAVGDAAVSLGLYGNQLMLTDGAPALLANEAFNPMTGYEHQGMGGVGG
GGYAGTGFGMAPPQGYGQQQSQQQVPYPPQSGFQGGFGPQGGYGGSW
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Synonyms
Publications