Naga_100007g110, gene1421 (gene) Nannochloropsis gaditana

Overview
NameNaga_100007g110
Unique Namegene1421
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:718142..723672 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100007g110
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:718142..723672 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005768endosome
GO:0005829cytosol
Vocabulary: Biological Process
TermDefinition
GO:0006810transport
GO:0009987cellular process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02760NO01G02760Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1473rna1473-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1473rna1473Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1473

>rna1473-protein ID=rna1473-protein|Name=rna1473|organism=Nannochloropsis gaditana|type=polypeptide|length=1458bp
MQAMRSHKFTGKHSFRLSVWNPMSQGREDDSIDTLMRRLYVMPKQSSRLV
YAGNYFADDEDEQDDEDEASILASNSRSVYARNMAIAGNGETIYENITSM
SSRSRDPLWRRDSNLLEKDSIMPGTGTIFFDEDSQEFVGRKDSNDGDDED
DSFEPKISPAHRVHIQNMAFLNCIQRTRATVGHFIPVARSEAGSLPRSEK
TSLATQDESLLSSDFDATLYIMRRFSTESFESEKFHGFVERELREKDMSK
VCVITELATRVEANYQVLIQGMKNVHEIDLYLKSTSMQTWECRRRLNLMD
CSIRKPFLAILQKSIRRENLKRIQHVLKRTRTVLILQSETKTALKSELYQ
RAVAAATNAKLALDSDVLKGVTMLGTSTQALNKLLPEVRLAVDRRLRHLC
SIRSDSSAAIFSTEYAWILRAYNRLDAHGIRLSSKPRSTSNPSPSDGASA
ASQDSLNDDIVPVAPAVDKGGITGLSERIQRFTAMELEYCTKVAIIKACT
VPISVSQGASVTDRKGANVKDPSENPSTFQFAPSLSSKNANYALSYSKTP
HHPENMGCNAPVTERDVHGRIVAFKGMPLNLWTISDLIKQLRPRTALLII
RELAQQATELLHRFFLLLQWHRSPYDSRNTEESFLHRSPHLVKRDSEMSG
GLSDDEDEDEEEHGTEGSFLFSARQEVPVVALSNFSIGPKGGSCSCDQAH
KECQATPPAFPELSAVEVTDLPSHSKDFLMRARLSVVAKGLRQARKQLWL
PLERTVIMLLNEQEVNLDGLVEAVATVEMLIALGEEFGNNDPAALRFAIH
TICVHFREKMHHECFGAMQQAIDREIWYNVPIPVEEFGGVTGLIKNYTQP
LAWPFKNGFGRHAKERVQRKSGGESKSRSQSFSTGSTPPILASFPSSGNP
FLIPSTSEESASDPTLYILPFPADLLDPMAPDDMDNNEEDPRMSPTLPSV
PSNTVQSPFLWTITQASLNGFAKHAGRYFQLMQVYPITARETYDSLLQLL
DFYVYMVFAIFVPEQSAELLLSQFPQLNKESSFAEEMSWASQDIHIPLPV
EMEQETSHLKSYLTRVHDNFIEEDCWGLGIGLETADRIRKLGADTAKKIN
AMAAATGVPNNFTMSAVASRVTSPRAGVNRFCEDKWCDIREQHSDTVGED
SERDGEKDREYFSGANVQPPFKIRKVRFQRPASIQLALEDPHSLHGLSYR
AIAVESCFFLLEIVKKFKPYFVALIQEHNDDIDSQEGGDHLQFVGEAIAQ
LRTFIYRCTAPRLVRASSIVRLVESQVWHHNVIREEANPYTERICVLCRR
IWEKIRGPEERGSAKLDGLDNMYIPSEAKVLIWTEVAQCIMGTLLEGFSR
IDKCSTEGRSLMSMDLQAIQVGLDEILRVRPARGRAYVENYIKAFYYGQV
DVMSWVEKNYKFYHYRHIAGLFDAAIGQKRIVRVFMNETVQLYHSLRTET
SETEKSNV
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Synonyms
Publications