Naga_100029g7, gene1369 (gene) Nannochloropsis gaditana

Overview
NameNaga_100029g7
Unique Namegene1369
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:587081..592219 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100029g7
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:587081..592219 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03250NO01G03250Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1418rna1418-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1418rna1418Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1418

>rna1418-protein ID=rna1418-protein|Name=rna1418|organism=Nannochloropsis gaditana|type=polypeptide|length=1514bp
MTPEAHVTREGGAPEASEETASPPRRGLDWSTARQRICQVCDDATSAEIL
RLRQGSLNFIFVAKDALLSQGALLGCVTVLVIGEALEEHSHDDSGNGEVA
KWIYRGILVVNVILNVWIVAARQICQQRELLGRVRESVETYRESVLTAAD
DEYASVRRHHAILKQGSPMLSIYPVFRDNQWQRVPGLLLVEEDIIALCAG
DSTPAEVEELDLESTEKREHHSRNVEEGPHHPFLASTPAQGKPEVLPAGS
KVGMRPDRQTSFLRKSALSPVSQRLLVLCRDMRCFRLRATPMKAFLEEML
RPDRAGSPPDTLFAKDMRISRSAAKYGVLALMLILLVAASVRFLWQEQEK
TSWAHFLLVEPACLAILALPVARPALSLLAEALSIARLLTVVEDLHLAQW
QGDWGAQRKGEAEADLEPERRIRLKSARRDRMPVRRFMRYASATLRARLL
PVPLLQPPTRSAAAQHVPVTITGGHQGAKLQRRRALLPIPLIQSKTVERL
GAVTMLGVIDDELLVSDTSSPEAVFLLNSKKTQETSTSTVLQMVREPLLD
PPPEILPATTLPTVKFEDPGWTQHLASLKPVGFCSLALVEAEARRGESLR
DHARGGCPGLVDPGQALVDFVLEDAPCHRRAYLAQLAHGIGFSASDDLRP
FFKGRGRLQVVASHRVEEQTSEDNRASSLEETRSRGMLQPYMTSAVWEDV
RRRGGTGDEADFDASAVASSGGMQLFSEGAPTPALSRCVDYWNGKVISNL
TTEDRRLIISTWKAWTLDGFHVVCLSYTPLPHHHRGLFAQGKVEDPPTYL
VDDYHRPDEMAHVDAVQEEAMTESEAKMSPHGPTGVQEDDEIEKDRPNSW
EDRVDDAARWAERAILSKTRPPQYTPESPSEYIGASQNVQSPLPSSKDQH
GHKIDRDTETGALRDFPHVSISMPDLLRGSTEPTPLAGTENLSSANIKVS
YGCASEIRNASKRRKGGGVKAEATFDSQAREDGLLWILLRRQVFLGLVAS
SVLPRNEMPGFVEEMMASGVRFLFFSPRNMRRSKKLAEQMGITMDWNAAI
SLRPSVVTVPKSHLIVGRGDVYGDWAIKSRLPHGCAAIREHLHKVDNVPL
LVSVYTDATPPTIDEMFLVFQDHHESVLCVGCGFRSTNAQLFRRADVAIS
VGGLPGGLKGSPTACTSPTESPVDMSRKHVPAPCDAAFNESMVGLFTVLR
LEATDNGTTVSLAVLTNVVKESRRLLGCFYQCISLGTTILCTSALLLILP
HLLPFPVGSTRGRWSLADTLWVLWIVLPLLVLPLLVTPADAGLLERYPRK
NVIRPFDHSILRTTRALLVRCLPTVALCMYAHARCLVSLLVQFSDVVNAC
HVKGAPHASVSTAWAQFGALLACQEQSALFREGHTEVTASYVVAHDLLLL
ALACSLFAQSSTFLHGTASLREESPLRNIAWIIGGTCLVAGQACHFIVRG
LTLVKGKGLSAIGWDVWVVALIFAPLASLTLSEIIKKADAKILIKHARFR
RLEFATRLGMHSPK
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Synonyms
Publications