Naga_100029g35, gene1342 (gene) Nannochloropsis gaditana

Overview
NameNaga_100029g35
Unique Namegene1342
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:524272..527509 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100029g35
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:524272..527509 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03530NO01G03530Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1390rna1390-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1389rna1389-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1390rna1390Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1389rna1389Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1390

>rna1390-protein ID=rna1390-protein|Name=rna1390|organism=Nannochloropsis gaditana|type=polypeptide|length=601bp
MTILSPCFTCVSSSSGFEGRVVDLETFEPEKLQATSLAIFLLATYGEGDP
TDNAMAFSKWLRNEDDELSEQALGGLKYAVFGLGSTQYEHYNKMGKVAHQ
RLQDLGARPVVDLGLGDELTVEEDFERWSEGLWSEFTQAAIEMGRSDTVA
IVEPAEVPAQGEQLDFTLKLLPTKGLLGRSTGKEKVGPSASNGAGVVKLD
ESKIQASTKFYFHNHEVAVLTNRELRSPRDGGSTRHVELDLAGSGLTYAT
ADNLAVLPENPAAVVEAVAGGQGYDLDALFDMVCEKAKFPTPCTVRDALT
LYLDLCGLPRRTTLGQLAAFALSAKEAERMKFLASKQGREEYNRFVVQEG
RSLAELITESFPSVRLPLQHLINLAPHLQPRYYTISSSSSVYPSQVHATV
AVTKDEPRPGRVHWGVCSSYLAAPSTQRVRIFIRPSSFRLPVDSATPIIL
IGPGTGIAPMRALLQERRYQRQAAGKEVGETLLYFGCRRRDTDFLYEEEL
ASFKEDGTLTDLQLAFSREKKEKVYVQHLLVQSANASKLWALMSKKSGHI
YVCGGTSMGLDVHKAIVSVVERAGKLNERAATDYVKALQAQGRYVQELWA
A
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protein sequence of rna1389

>rna1389-protein ID=rna1389-protein|Name=rna1389|organism=Nannochloropsis gaditana|type=polypeptide|length=676bp
MVEDGIITPWTVLAALLTASTAVALLVTRFVRKAPPLPLDPKEGPRTGRV
TRNSVEAGSFPNGAIDIYFGSQTGTAEGFAKGLAREASRYGFEGRVVDLE
TFEPEKLQATSLAIFLLATYGEGDPTDNAMAFSKWLRNEDDELSEQALGG
LKYAVFGLGSTQYEHYNKMGKVAHQRLQDLGARPVVDLGLGDELTVEEDF
ERWSEGLWSEFTQAAIEMGRSDTVAIVEPAEVPAQGEQLDFTLKLLPTKG
LLGRSTGKEKVGPSASNGAGVVKLDESKIQASTKFYFHNHEVAVLTNREL
RSPRDGGSTRHVELDLAGSGLTYATADNLAVLPENPAAVVEAVAGGQGYD
LDALFDMVCEKAKFPTPCTVRDALTLYLDLCGLPRRTTLGQLAAFALSAK
EAERMKFLASKQGREEYNRFVVQEGRSLAELITESFPSVRLPLQHLINLA
PHLQPRYYTISSSSSVYPSQVHATVAVTKDEPRPGRVHWGVCSSYLAAPS
TQRVRIFIRPSSFRLPVDSATPIILIGPGTGIAPMRALLQERRYQRQAAG
KEVGETLLYFGCRRRDTDFLYEEELASFKEDGTLTDLQLAFSREKKEKVY
VQHLLVQSANASKLWALMSKKSGHIYVCGGTSMGLDVHKAIVSVVERAGK
LNERAATDYVKALQAQGRYVQELWAA
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Synonyms
Publications