Naga_100029g40, gene1337 (gene) Nannochloropsis gaditana

Overview
NameNaga_100029g40
Unique Namegene1337
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:496268..499402 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100029g40
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:496268..499402 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
Vocabulary: Biological Process
TermDefinition
GO:0009058biosynthetic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03590NO01G03590Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1383rna1383-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide
rna1384rna1384-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1383rna1383Nannochloropsis gaditana (N. gaditana B-31)mRNA
rna1384rna1384Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1383

>rna1383-protein ID=rna1383-protein|Name=rna1383|organism=Nannochloropsis gaditana|type=polypeptide|length=651bp
MNGIGNMNAELASRDSLAPQGAARRLDAISEADPRIDKDWESEVIRRGVR
TGRGETSDGRSMALEGRGARDLSLTASLSSMALPSKGLKDSEFKSVETVL
ADMRSVQSRLEESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFE
YFQDVRIFLSSLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQE
DALEEALETDGKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPA
HHDLDEFGRDASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATF
SGAEESDSEVETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKR
KFPKDYHTAYVPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDV
GGAAIEAFPWFERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSR
LEGLLNECYDPFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEK
AITKLCLPLLGPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLAS
LVLGVLLDGKLASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPA
LVVRGDGVRLLGMGRLLDKLETRELAGPLSSTVKRVRLGFGNAIKTTQKV
K
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protein sequence of rna1384

>rna1384-protein ID=rna1384-protein|Name=rna1384|organism=Nannochloropsis gaditana|type=polypeptide|length=841bp
MSHLEHISAGNCRLLRFLLWLNGFDTAQMKASAFLSFADDVEDDEDGNSG
GLKTLKSKKKNKKAFASKKSLQRALEEHLDEKAAVDGIASANQAGGVSYS
GGGGEYSKEKLAELKKVQNFQVSIKASRTTEAKARVAFEVPEDTDGEKED
AEGVDTEDYDVHSAQLEQLKKGKRRRGMLGSGNGLGAEEGMDFISLEASG
EGGTMSWSGKGAARRLDAISEADPRIDKDWESEVIRRGVRTGRGETSDGR
SMALEGRGARDLSLTASLSSMALPSKGLKDSEFKSVETVLADMRSVQSRL
EESHDRNSRTAEKTRSEVASVKDGLEKMQKEFGGTAARFEYFQDVRIFLS
SLCGCLREKEAMVRELEAAMAQLWREGYERRMSRRVQDQEDALEEALETD
GKEQQSSQAGMLLSLQGYAPEVVIALKESLSKGAGVPGPAHHDLDEFGRD
ASGKMSKDRRRRERRGRLASVLERINDGTGGDKAEAEATFSGAEESDSEV
ETLRTRQAKLLEAAGVIFEDVADEFKALDAVVQRFEDWKRKFPKDYHTAY
VPIALPQVLEPYVRVEMVTWNPLGPVRSMEDGDGAGGKDVGGAAIEAFPW
FERLFEYGQFQEEGSAPKQEGEDPDDRLVPQLVEKVAVSRLEGLLNECYD
PFSERETQRAISAIQGLLIYEPGKHALESLLRAPFSRLEKAITKLCLPLL
GPEAGISLWEFQRRQIFVALKLFRNVCFWHQVLAPRPLASLVLGVLLDGK
LASALENRLDNTGRGILSKSKTVLEVIGTLEALMIATPPALVVRGDGVRL
LGMGRLLDKLETRELAGPLSSTVKRVRLGFGNAIKTTQKVK
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Synonyms
Publications