Naga_100042g26, gene1221 (gene) Nannochloropsis gaditana

Overview
NameNaga_100042g26
Unique Namegene1221
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:189982..195892 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100042g26
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:189982..195892 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0000166nucleotide binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04780NO01G04780Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1267rna1267-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1267rna1267Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1267

>rna1267-protein ID=rna1267-protein|Name=rna1267|organism=Nannochloropsis gaditana|type=polypeptide|length=1554bp
MVAEGGKRGRPAVSGSNSNHNSSGSKAVKTSASATTGAGAGSRSNASGGS
KPLGALRHISPIPLRESAEFNGDQGLELPLIRHGNPGSLVLVDGSVHQGF
GFGADVPVAGEVVFNTGMVGYPEALTDPSYRGQILVLTYPMVGNYGVPSE
DALDAHGLPLYFESRKIHVAGLIVASYSADHSHWNSIKSLGKWLQEHGVP
ALYGIDTRALTKKIREAGAILGKIEFKTQDKQRGKQKGGAGTNVDFLDPN
KTNLVAEVSTKQVRVYGEGNRPRILAFDCGMKYNIIRYFVKHHAVEFTVV
PYDYDLQANPSKLEWEGIFISNGPGDPTMCAATIKSLQWAMGLPTPKPIF
GICLGNQLLALAAGSTTYKMKYGNRGMNQPCVDMRTTKCYITAQNHGFAV
DSGSLPADWKTFFLNANDFTNEGIVHTSKPFFSVQFHPEACGGPTDTAFL
FETFINLVRGSPHQLSLLDPSLYQRFKYKKVLLVGSGGLSIGQAGEFDYS
GSQAIKALKEEGIEVILINPNVATVQTSKSLGKASPDKVYFLPIRPEVVL
DIIKKEKPDGIMVNVGGQTALNVGIKLWESGDLQKHSVRVMGTPINTIVA
TEDREIFSEKLREIDETLALSYPATNMEEAIAAAKKIGYPVLIRAAYALG
GLGSGFAEDEAELIALAEKAFASSSQILIDQDLRGWKEIEYEVVRDIEDN
CVTVCNMENFDPLGIHTGDSIVIAPSQTLSNQEYYMLRSTSIKVIRHLGI
IGECNIQFALHPESERYCIIEVNARLSRSSALASKATGYPLAYVATKLCL
GKDLVSIRNSVTKTTTACFEPSLDYCVVKMPRWDLSKFNRVETRLGSSMI
SVGEVMAIGRNFEEAIQKAVRMVNPNLDGLDGKCDVAASLDSQMQIPTPH
RLFAVQMALERGYSVDAVHALTKIDRWFLSKLKNMALMKAAACKASLDSL
NAVSIRALKCHGYSDRQVARYVNSTEVVVRRRRLQLGVRPCVKQIDTLAA
EFPAQTNYLYMTYNGSEDDLGPDENGVMVLGCGPYCIGSSVEFDWCAVSA
VRQIRTTGMRAVVVNCNPETVSTDYDESDRLFFEELTFERVLDIYEREKA
VGIIVSVGGQIANNLANPLFQQGVNILGTSPVDIDRAEDRHQFSELLDSI
SVDQPSWQELSTISDAKKFANEVGYPVLVRPSFVLSGAAMNVAATPRQLE
SFLQEAADVSKDKPVVVTKFILNAKEIEFDAVAKAGDILNYAISEHVENA
GVHSGDATLVLPAQKLFVETIRKVKRISSAIAKALNITGPFNIQLMAKDN
DVKVIECNLRASRTFPFVSKVFDANFITLATRAMLGVPTKAYNISLIDID
YVAVKAPMFSFTRLRGADPTLGVEMASTGEVACFGHDVHEAFLAALIASG
FRMPIKTKNVLVSIAEETERLEFLPAVSALLELNYTVLCTPGTGEFYESR
GLEVKILSKKAGDKKHPYVIDAIKDNQVDVVINVPEGTKKDEEVTIGYAM
RRSAVDFGVPLVTNIKCANLLVEALARHKGIKVQSVESFYRIPTVGWQRE
NEIM
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Synonyms
Publications