IPS, gene1199 (gene) Nannochloropsis gaditana

Overview
NameIPS
Unique Namegene1199
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002457.1:129868..135872 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100305g6
Gene biotypeprotein_coding
GeneIPS
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:129868..135872 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
PXD0084992019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009056catabolic process
GO:0006091generation of precursor metabolites and energy
GO:0009058biosynthetic process
GO:0006629lipid metabolic process
GO:0005975carbohydrate metabolic process
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO:0016740transferase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005829cytosol
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL091ngnoL091Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05000NO01G05000Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1245rna1245-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1245rna1245Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1245

>rna1245-protein ID=rna1245-protein|Name=rna1245|organism=Nannochloropsis gaditana|type=polypeptide|length=1636bp
MSETSSFGILIVGLGGNNGVTLLAGLRANQLGLEWEAPTGKVKANYLGCI
TQLPKKGGKGGYKEAYELADANRAAVGGWDIRSTPLGDALYASHVLDYDL
VRQVRASLNQVEKWKGVWDPSFIGESQHATATNAVDLSTTTHAQALALLR
ADIRRFRRLHNIPLAGHITVIWSASVERPSLGDYPTATALLAGIEANDPE
VSPSLLYAAAACLEGCSFVNGGSQNTLCPGLTELAASRAQLHTPNGPVKA
RCYVLGTDFKAGQTKFKTAAVEYLRALGLAPTVIASSNHLGNNDMLNLTS
KKTLDAKMRVKSDIFAGWEEAIDHQVRVMYTPFMGDEKRDVVEYTSLGFL
GAPHTMLTYTRCMDSILCVPLMLDVAVWCDYFARKNVPPRRVALATAYLF
KVPEGAAKGTDPGFFHQMAALEDVLAETKEGGREGGVGRGLTRKGLVKDV
EGGGGMTEPWVGGVLCVGLSCLDLMLVGASGDGETFGAINTFQTQVFCPG
GAAPQASVALADMLGMGGREGGREGERECAFTTSIVHVLTKMGRDVHGDE
LLRQLEQAGTDTSLVIRDAQHCTSLAVLPILASSGARGCFVNLQANDSFT
PGEALAALREGVRAGEVQGVAAFHFGYPHLMINFQGPALRDFFQAAAEIL
DGVNGGEKEVGRRPARRRLLISMDLNGVTTRNSEPDVLAEAWAMTDVLHL
NQEEAGLLLDWEATGLGAFDEVLSLPSLRAVGDALLQNGLGVVALTLGEQ
GAYVKVTNDEKRLQASATLAWQAAKWVGQEAFLPPFPVQAGAEVNTNGAG
DAFIAGLLAAMLCKTESLSLKQATCFALLTARERVDSLRRASTPKASYNE
LLAEAMNLKGNRALRLQRMRRRRPSWLYRGISAFSTVMLCVNVVHATPSR
GFSRHDLPPHSSAFIPRLPVSRACQGPDRGPATDKNTRRSSIRKMAMSIN
HRKPPRKYRGPIQGYRDEPLHHIPPPQSAPRPIPTPSSSSPSPPSSARAP
RIAASIPLSKAASAAAASPFEPLHPSLSHFPPSSPSTSPSAAGAATQGSH
PTYKLPSQTVEWQRLVRHAAEIKALHLRHLVQDPVRSDALCVDYDGVYMD
YSRQQMTMETRTLLIELAKRTQVGEKVAAMARGEKINHTEGRAVLHMATR
AGREESVVVDGVDVVRQVHRVLDKVKAFSEGVRQGTIRGATGKRIRNIVA
VGIGGSYLGPACIHEVFKTEEEGSQSCRDFRLRFLSNVDPVDVARAQEKL
DPEETLVVVVSKSFATAETMLNARTMRQWLWDGMGTHPDVCAKHMAACAS
ASATQLVEAFGIPGERLFEFWDWVGGRYSVCASPGALPISLKFGFSVFEK
FLAGARSMDRHFLTAPFEKNLPVLMGLLGVWNMSFLGYRCRTIIPYAEAM
MKFPAHIQQVDMESNGKHVTVDGEEINYDIGEIDFGEPGTNGQHSFFQLL
HMGQVVPVDFIGFAESQKALHVAGEELSSHDELMCNFFAQPDALAVGKTG
AELLAEGIPPDHVPHRTFKGNRPSLSLLLPRLNAYSMGQLLALYEHRTAV
QGFVWHVNSFDQWGVELGKQLAKSVREEMKLARTGQAPNLHALVPATARI
LQRYWRGGGGKGGKERSLGARRVWGKAGRNGRGSGM
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Synonyms
Publications