Naga_100006g12, gene1113 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g12
Unique Namegene1113
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1334765..1345095 -

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g12
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1334765..1345095 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region
ngnoL050ngnoL050Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00220NO03G00220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1156rna1156-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1156rna1156Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1156

>rna1156-protein ID=rna1156-protein|Name=rna1156|organism=Nannochloropsis gaditana|type=polypeptide|length=3216bp
MENVGNMSGGSPSGYPPMALGQQQRLNNQQHEPSPQQLYLPPQQQQEQHF
AAYQMDPPAYGQHTYGYMTGAGVGHSAPSPPVYHAQPPAYPGPYPSHPYG
NRTGTMHDGNVSGNSAHAHYPTPYHHGREHGEGGGGKGEEGSLSLSAAAM
QQFYLQQQQAAAAAAGIGPQSSGVDAVAWYALAQAHHQHLQQQQQQQQHR
DHNHQALPVQQHHHHHHQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHP
QHHQAFASHLTGDGRKRGGEGADVQAQLPELQFQAEVSGKSHVSQEPNRK
KVRERSAPSKRKAAGEKGGRGGGRKGGRPPSPSAYFPPLMPGTAVLPVDK
ESEAALLAELRAEVERLASQRGEGGGEGYEGEEEEEGNREPGDGPNDPTK
KNGHANSVDVVAKALIDWRVEQVYPAAEGAAGVLEGGEGGREGEGAGQVI
YVDVHGQVFASKAAAVEALLSRVVQEEEHRKMKARKRGEMRRKQEATPGR
DGSMSLSAGPEPSPAKVPGVQSPSSPATSALPLSSTAKAVKGPASRPSLP
PLPSMNPSVLETLGGTLPPLPAHSNTSSTSSITGEAGAYRPTPLEADAAD
GNKGEELRGGGGREDDEGEEGSRGERGMVDSTCLSPASLALARSKVYDEA
RTFLSCAVLKMPVQLGPVRILSFGKIDFIRPKYHCETEIWPLGFKAARVE
MSHVLRQLLVLFFEITEGGDKGPNFKVILELSKPLSGGGGGGGGGEGGSD
GGGGGGGRFVFHARNARKAWGDALDKLCLLEKHELARRRARKKRRLAVCE
DKVKEEEREDDGRKALVACDPEEEEARRALGKLYREKVLLEKEVLKERCE
LLAQLEADARTEAYTWLSQSTSTALALPVPPLRLRTGAKRGKPENGQTEG
EGGVEDGREDASVRPWVDYRSFFTDSIRRLIEGLPGADKCKLYEFVDLRR
PAFGQGGHREGKGGLGGGRDPLSDLVPASEGVKALAAASFGLESSAGVVN
ETIVLARAKAAAAAWAAAGEEERGGKLLKGGGVNWGGRGKVKMEGEGGDG
AVRSAEEDATLKAAREMEREELIRLRCEEVRQREEERRQNKLMEKEEKKR
SKEEQRWEKRMRQVERKRRKERIKELERELKRLRIRMDNDIQRRRAAARQ
LVQVGADAPAGMVAVPQLAHESLIDDAHLEETEKALPLPPSSTPSSNSRF
SSANNLLSSRTMADVLQVWDVGYTLAGKMGMSEWPSLSLFLKALDAAEAC
KDRHPTPREERRMRVLSEVAQRLTGVLLPDIVQTLMYSSPSQGGSGAGSG
AGIDPDPTLPLNEMTWPELARWAFMAQAYRVMQLPVDLAYALRGRGVDFQ
MDAWDKKALTMGRLRVLMRHRGTGGGRGGGGGLPVWSRTAFTLCIPTPNP
LRCLLSGWQVALESLRCLPGQGTKDEGRWGPWVDEHVGRALSAVERREGE
VGVGVLTAVQEASRILAPFREEGENQNKKGWLEAIKQAVEKAMTALDMYQ
SNLGEGGIWKELETDPIAGSMQRGGEQRPPQAPQQEEEEEEEAEKDLQEH
WQSPSSVEGAGGKIRVGDSRSGVGGGAGEGEIKQDGEELQKVSGTPAIPS
SLNRAMTSESIASMSAPSVTSTTGDGLPQLASSTVPSLPASPSLGGTEGG
GNNGVSLACSTASFETDSLDSESRRSSAEKEGGSRGGKKEKRKRRRSSLG
LGAEREECETVEGKEEEDGMGILTKGGEEEEEEDEEDEEEEEEEEDEEDI
DAYRDITPEDFEAKAEIIRRCYAILQALMQAKGGSLFKYQPHVEGYGEVV
ARPLGLMDVTRNLRNGQYDDSVGRFAADVRRVFINCALFNPENDVILHDA
DRLVARFDRLLLQWVLDVDAPPLEELGLDTTCKVCRDPYPQSVEVTLVGG
IKEWRQVSPQQCNRCDASFHPDCVKMPVLHPNRNVSEQGKEKEYWFCEDC
IRERMPKDVDPFLRLRVVKHFPGVGAFAGRVASVRYTREKAVYTLLFRNP
SPSSSSSAPSFFEHKLDRNALCSLLRAQGLPQQNPELAQLLLQRPAAIDA
KCEYEALGHCRWGLGYLLEGESRFPRKLDPELSLVVRRWINGGDVELVEL
LKGIRALDAGVGGRRRRKGGRKGAREWVACLVALAGQAGGTVRVRDYLEG
QEEDLRERLGEVLVEGVQKGPKEEGREEGEEKEGNVKEDEVVGVENAEKD
AKKTEEEELVGDEDEEELGVLRGVPPIFLPGAGGTARVVQEEEDFSDDEA
YAQRQQELLEGKETEKGEGEETESEGEGEEWEMEGGAEEDEEEEVVRRGR
GRSRKSVGKEETPVDVGSLTSSPPSALPTSTVTATPTIGEKEEEKETGPG
AGGRKRQPLKGKGEKEAVRPREPGILMGLPLFTKGGGDLLLVGKQPLRAR
EYLCFEEGVKEETRRALGKEGLKLLERLSKEGQWEGKEGGKEEGGEEGEE
GEEEEEEEEGGEEEEKEGGEDERGGGTVCALCGETEEYLCNIMVHGPSAE
DYYALPEEVREALEKRMVTEQQEKSADRYVFWQPVDENLALETERVLKEV
FTSAPLAGSEGREKVKGPDGKREVPTLRKGSLITHECCADALVEAKAEAG
ARERRLRRKVGVESVAFMGRGRTAALGQDRGGRIYWQFAGEPSFLFVQPY
DRQGQSEEGIAGSTDAMALIRQKHDEALAHSVDTGVLALGEGGREGSVEK
WLVYESAEAIGKVVEEYLNPRGKKERALREAILRQYPDVRKFLRNKRSEE
DDGETDNLGTGADENEVGQEETEKETAGATQALWGVGDAVFVEKHGVLWK
AHVIFVNPDQGVVRVSYDGWAQADEWIPYVPGPSSLPSPSSTPDMERDAP
PSLLPWTALRAEEHEEQWGKRQEIARARYVSPVPFVEKLRAFPYVTASNR
NRQRSKAKLLPTRLRYEFRRKALNFSESEERMAGMEDVEEEEESLIEVKA
AILTVEAALPLGCILDAPDEARKSIKLRRDEFNKWVRRVEMAATARELME
CLILLEHSIDSRWRLNPFRSTYLLCMSSWAHALKYATPASLALRVWSLDR
LLDYGRVELDTDGDSRRLSKGKSQPPGFIKPGTVGGGYVDIGVVPDFLPY
VPEARAFAGGSGREGEDNGEEEGEWEDGGEGGVPPGTGRVGERGEVQGGK
ARKSHGKVVNGGETSRSLDGSADASNCRSRIRTVVQIWHERDNFNSFKRR
RVYQRKHAQKREARRH
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Synonyms
Publications