Naga_100006g15, gene1110 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g15
Unique Namegene1110
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1318228..1324658 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g15
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1318228..1324658 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005768endosome
GO:0016020membrane
GO:0005737cytoplasm
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G00740NO03G00740Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1153rna1153-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1153rna1153Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1153

>rna1153-protein ID=rna1153-protein|Name=rna1153|organism=Nannochloropsis gaditana|type=polypeptide|length=2003bp
MTSHHPAHAFDKQYNRRLIDYFVVCGLSHRNPQIEIEALDGSGEPWCDIV
PTSPSEITPHSSMPIFPVMPESNRLSSAVFPASRLVARQDIMEISIHMPD
EILPPKYTIIAQTIGGNEADLDSKSYFARGSHGAFLCYIRRGPQDVGPAI
ADVIILDKKESVPAGFELVATTVGGKPIKEITLAVRRQRYNASHRYFEDR
AITGLYLFCPGKGEALPDDYGGHGHDADLRASEEGTSRPPTCREHPLSAS
SSSSASSSSSSSSFKSPSRYQDSGNGYHVVKGEVSFKAGSRKQLILAYRK
TPCPTGLCEVTYKGEMLDRFPARDHHDFALPRDVLPMFSYPKGIRIMRVR
TDKPPEPSYCSYVLTDEHGRNYYVASLSFSEPLSPAMTVQTELAIKKELI
RRGRFKEHLEYVLERCLVDERKKFQRYGGGGTGPQPQAHLHSQYRQRYLL
VAPKVLMCVSHWPVFAFMKKWLSQIYVLAMTQNPIPLERCIQHFVTALPV
PEAGGAPLKFQLHDMMEPIMLVRPRLQGLPFIDLSFSTLFQCLDVGNVLT
VLALLLLERKVLVTAKHESVLTDAMEALRALLFPFKWESCYVPRMTESML
GCVEFPGAFFLGFRDDADEENLSADRDWRGDSGGTTMLGKVHGLLCNCDD
VVWVDLSRNLLTSASPLLPVTFKSLPSELRQTLQKRWNLALAAADIQPGA
GFSSNPDHDLDFPGLSLASQPILHQKRTPLNDRAIRDAALCFMLSLLNGY
RDYLVAPDLRQGHRELFNKVAFLKHCVEKTRRPFMVKLMNTQLFSSFIQR
RTEASDPHLLFFDNCMVSYTKTPEVWDHSRVALHYSSDEGSNAEGHAMPK
DRIDATSPASPSSSMPQPLLVDRVENMEMAASFPSSHVNSPSSKMMAKRS
AASFDAPTPKTSFSSLRSSSSSSSHSSTKLVPTVLVENPHEDLNAYAKEI
GLPASQKSMVRLSSSISFSSSLSSSPRSAVLPRLAKSPSRISSYFVQNQE
HILSEKGATDVDRPSVEGLSEGILYSYCDHGYLAWPKQLNVKLYLDTKLT
NSQNDYWNSEESMLSHSQTSISPTNNCAKHHYLNDGHMAGLLLTRTHLEL
SQDEQDVNLHSAGLGCNSEFRKRWALDFYSSWFMCLPLLVRSGRKEEKEK
LIVQAFGVLAAMQRDRRIAPDETIYRALLVAIVRSGDAHCHRSDAVHLLR
EMMALDIKPNAITYGQYTRAIAEDYARKNIKALSQADLLTFSVYELLRKR
RSSLYIDYLDESQKHLRDLGSEWRRGLSLDRSTDGNDRSPSASLHHRLRS
SPGITQSSYQFREDHDQSRADTLKAIRQSHATVGMSWSFAARDDLESSLH
SLQDFSFVAISNDVPCECGYLMLEEEIMGKWHGEGGHEDLASVTCTSCHR
AFQPQLHVRCSSLDANFLYYAFPGNDTSLHEDKSYAEISPLHEEKSKPGN
AVTANTDPNLHKNLKTGRHVKTKGLTSNANLNATAAGHEKCEFENETSTT
DKDRLQLHDLNRLLLPYLVKCMTQHRSQFTENSMTALVEEYVGRALSSAD
ELSDGVKSKYKFHTTETQSRSVGAESTVADFAPDVSFSDRGPLASIETFR
LSRRVGKIFTRSSSLESDGHGTRKSLETSTKSSQVHTSPLKQSKADMQSL
FSRTIECCYMSPAALRLGLECLIKEYGERALYREEMLILCPELFWNLAWY
STRFGLPLPLAVPLNSERGNLHAAGVPLHLLLVSGSDKVAVDKAVHAAIL
IFKTHNENLIMQQLYHAVDESVKTPYSSSAGLGAGSCPDMVCSSLDALTL
SSSSTTSEGFTGHHRDRVKLRTEEAMNLMINQAFINFRQEMLTDVAGLTN
EALHKYTSNLLEKVKDTPLGWLKQLVHMAFRDERGLLPAVRFFLIQRRDG
HDPLFQQSMYRVLYFLATKTDVASAHQQNQPMEIVGFKKRKGHERGREGN
EPATFWTLYAKACEDIKEQQHELVDERLTLNVLLDAAPLKIDRVDYWSFP
QLL
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Synonyms
Publications