Naga_100006g49, gene1077 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g49
Unique Namegene1077
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1227763..1232348 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g49
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1227763..1232348 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
GO:0009987cellular process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01160NO03G01160Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1118rna1118-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1118rna1118Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1118

>rna1118-protein ID=rna1118-protein|Name=rna1118|organism=Nannochloropsis gaditana|type=polypeptide|length=1339bp
MAFDLINRGCVSSSYEYMMKIVYVGISSFSISCSLLILVRMWWRHHRKKF
ATAIGRLVERLVVIGAFLDVTFHAVDVLFALDCSAPPLLFLLSAYKENIH
AAATITFNIIKEGFGLLSLSWHAHLAYCLYSWIVLKRSAGRLQRHRLPFM
MLIMAIITGIRLTLYKELRKGLLGLYLSAIIYDVILLPGIIAAMLRWYFL
TISVLRAGDREQRQQREQQEREQRGEANLADTGEHVVVDMAGVAVRENGL
DRTSVSSSVSSAQGSTRPRLSHRSEGNEDSRAQGMQRRKSSFHFSSWWPS
INGPSGCKESQSRSHVVSGDSGNVSQTFRPPRADSLSPPSNFADGQTISR
APMEVEPVPTATLHEMGATRRERVRNSSTIRRLLRISLTVACLWTCIAVV
DILIWVRFYLGENTIRMKTPFLIRMVLMRAVGAVDAVILGDLFILCLPCA
RILSRVVNRLRRSDLSYVPGGRASVGNVAGPSSVMSVSKMRASMVGDGGR
GLLKNANMLQKEEEASRTERKLDAINSVRAPNRQMKNVDFFATTWNMGGV
DLEALEAGHFREALLPQWLPPSFSLYVLGVQECQCLRQFRADVHSHLGGP
EAFVMFGDELGDDQFLHGFIAITLFVRADDVATGAFHLHKGAVNKVAAGV
SLGALGHAPNKGMVGLSCRYYDVSLAFVTAHFASDSKGRNRVSKRNQHAR
TTLQALSLHNDSDDFEVHHQHHHQICLGDFNYRLSPATPTEVVQLVARSA
QISQEIVANEASESNANPTSENWRKLSYKHFFERPTGLTFSLGSIPELPP
CLGTRYSSNSSQNVSQPSYGTSGLGLPNSTSSKSYLGGKLPHLFLARSGS
NAAKDELNRPPEAHGIGAGFSNVLRRRPSMELDMSSPHSRFGRQESSNPV
YGIGSITDGEGPQQQISGSPSLRKNVKPSIVNSSSTQSIEDLGVDMAWNW
VGCFDELSRSMRGRVVFYNFTEAPITFPPSYRWNRSIHGFDLAGDYTDVE
QLMHAYSTFVADHPKLISRLTKSFVSHNERGNGTVSPLSTLPRSLSSSTK
RKGVSLRTPSYTDRILTHSMPGKGANLRWRHYDMMDAVPLSDHRPVCAHF
TLFVDANCRGFQTFSTPPHSVVPPEGKFSQVDEPLAMQTANKEELALFTV
VLSHPHVTLKGGSNILSNLSAATIPHEATILFPLVSEDPLAAERLASSLG
EVIPGGTSHGQSSFSSLSHHEWSSFPVRLKTLASPRFSEHLLLKVSNDRG
KEIGQTIIPLALGISSKEVPQETHLYPSSYANSSLCSFRVDEIVQGLHGN
EDNRRFSLPLTKGGSLRGWITLTLRTKIKPIGQQHRSQP
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Synonyms
Publications