Naga_100006g78, gene1049 (gene) Nannochloropsis gaditana

Overview
NameNaga_100006g78
Unique Namegene1049
Typegene
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:1157270..1161950 +

Link to JBrowse

Properties
Property NameValue
Locus tagNaga_100006g78
Gene biotypeprotein_coding
GbkeyGene
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:1157270..1161950 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
SRP2295572021-06-30
GO annotation for N. gaditana B312020-04-08
PRJNA1747702019-07-03
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Homology
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ngnoL053ngnoL053Nannochloropsis gaditana (N. gaditana B-31)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NO03G01390NO03G01390Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
rna1089rna1089-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
rna1089rna1089Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
The following sequences are available for this feature:

protein sequence of rna1089

>rna1089-protein ID=rna1089-protein|Name=rna1089|organism=Nannochloropsis gaditana|type=polypeptide|length=1287bp
MFFEGEAKRRPNVSLRGKSREEEKAELLVRARRERQARAADKEKRNAALA
ILRFHRSRKIVAAFKAEQVAEFDKRMMDLWNLRKLLQKAQRPLPTPTSLV
EGLVGQLISFYSPIREGDNQRLLRLAYLLLDSCGSTNAAWNYKIWRQSHP
ALFEAEVVRFTRLCLYRIDALRRKRACEQEKDTEGIGATGAEEEEEVLLK
LVEELLDLPVGAGDNPASEVAVSWRMLLQLTVEGGEEGDCWGHVEMPRTK
RRKTCHGDQCRRTPLPRLLLNPFLARLQRHLGLSVLLRRELLAFSSSNRE
AKGSGSKAFPAALKLLWALACTAAGLPRGFPGVSPLPPPIPPSLRDLQRA
SRSQVARSLLSIPKLFTESSFSPLLAPLGQGKALGLWGLLDGWDRAQQPE
QEQLRRSVGTPTGRGGEGQGTEDVGELAVVRNLLDLTRMLLQRGGEEGDP
GERGGGMPALVRALGFSVRRVPFVGEKGGGDKDILAEDEARMAVDTEDLE
GVEGGDGEGGTGSWRGKGLEEAIWNAMRVSQARTGALGSEALAMATAARE
ALKKLCEGRELPRLFDRFLEGMEKAGEAGREARERDVVNVCRLCSHVLVH
AEDSLPTSVTHAGAHAVGGPRPEGLSSKVLNLLAYHQGRDDVPFVRRLWG
QFLLPKVLAAGGGRKAFAAGNEEGLLPDYYPAFHLLFSVYSHQLMALDDE
EFYLRQTPLSLSQVLVLVDALKGLLYQMYWVDPNRLLLASSSSLLPPLEA
LQLTRVATELFNQLYQRHSRRPFPPAIAAEAERGVGDRDAMEVDTSTTVR
GYNRSRAGLTAQGESDPALWHWPAITQHELDQELSAAESVAEQPPQLPYP
QSHAHVENSTGASSIETLFDTSKRLYPVLTRIPQVLPFAQRVQVFHKLLA
ADKRQAQDEAQLFGHRIRIRRAHIYEDAFKALNHLGHGLRGRVQVTFVSD
LGTEEAGIDGGGVFKEFMDALTKRAFDPQYALFRVTPDHLLYPNPLSGLA
VGPDHLQHFAFLGKVLAKALYESILVEPQFAIFFLQRLGGKLNETDDLFS
RDPELYRHLMSLKRLAREGEGVGADVRDLSLNFEVVVEDDEKLLPQEAAA
VELVPGGKHVPVTNQNVFRYIQLVANHKLNVEINTQAQAFLRGFRDLIPM
PWLRMFGAEELQILLTGEKRAIDIENLRAHTRYSGGYHPSQPIIHWFWEA
LRSYTPDEQAAFLMFVTSCSRQPLLGFQHLNPPVCIQRVPLTTEGGERLP
SSATCMNLLKLPAYPTPEMLREKLLYAITAGAGFELS
back to top
Synonyms
Publications