NSK002415, NSK002415 (gene) Nannochloropsis salina | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NSK002415
Unique Name	NSK002415
Type	gene
Organism	Nannochloropsis salina (N. salina CCMP1776)
Alignment location	scaffold16:457188..458733 +

Properties

Mutants

Expression

Analysis:

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold16	supercontig	scaffold16:457188..458733 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
RNA-seq profiling for N. salina CCMP1776 under high salt and nitrogen limitation	2019-10-29
RNA_seq analysis for N. salina CCMP1776 v2 under N starvation	2019-10-10
GO annotation for N. salina CCMP1776 v2	2019-10-09
Gene prediction for N. salina CCMP1776 (version 2)	2019-10-08

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042765	GPI-anchor transamidase complex
GO:0032991	protein-containing complex
GO:0005783	endoplasmic reticulum

Vocabulary: **Biological Process**
Term	Definition
GO:0016255	attachment of GPI anchor to protein
GO:0006508	proteolysis
GO:0009058	biosynthetic process
GO:0006629	lipid metabolic process
GO:0006464	cellular protein modification process

Vocabulary: **Molecular Function**
Term	Definition
GO:0003923	GPI-anchor transamidase activity
GO:0008233	peptidase activity

Homology

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsR140	nonsR140	Nannochloropsis salina (N. salina CCMP1776)	syntenic_region
nonsR138	nonsR138	Nannochloropsis salina (N. salina CCMP1776)	syntenic_region

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
NO14G01720	NO14G01720	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NSK002415t	NSK002415t	Nannochloropsis salina (N. salina CCMP1776)	mRNA

Sequences

The following sequences are available for this feature:

Synonyms

Publications