NSK001110, NSK001110 (gene) Nannochloropsis salina

Name	NSK001110
Unique Name	NSK001110
Type	gene
Organism	Nannochloropsis salina (N. salina CCMP1776)
Alignment location	scaffold12:450006..451727 -

Link to JBrowse

Analysis: RNA_seq analysis for N. salina CCMP1776 v2 under N starvation RNA-seq profiling for N. salina CCMP1776 under high salt and nitrogen limitation

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top

Aligned Feature	Feature Type	Alignment Location
scaffold12	supercontig	scaffold12:450006..451727 -

Analysis Name	Date Performed
RNA-seq profiling for N. salina CCMP1776 under high salt and nitrogen limitation	2019-10-29
RNA_seq analysis for N. salina CCMP1776 v2 under N starvation	2019-10-10
GO annotation for N. salina CCMP1776 v2	2019-10-09
Gene prediction for N. salina CCMP1776 (version 2)	2019-10-08

Vocabulary: Molecular Function

Term	Definition
GO:0016889	endodeoxyribonuclease activity, producing 3'-phosphomonoesters
GO:0005524	ATP binding
GO:0003918	DNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0003824	catalytic activity
GO:0043167	ion binding
GO:0016887	ATPase activity
GO:0016853	isomerase activity
GO:0004518	nuclease activity
GO:0003677	DNA binding

Vocabulary: Biological Process

Term	Definition
GO:0006265	DNA topological change
GO:0000737	DNA catabolic process, endonucleolytic
GO:0051276	chromosome organization
GO:0034655	nucleobase-containing compound catabolic process
GO:0007049	cell cycle
GO:0006950	response to stress
GO:0006259	DNA metabolic process
GO:0000003	reproduction

Vocabulary: Cellular Component

Term	Definition
GO:0032991	protein-containing complex
GO:0005694	chromosome
GO:0005634	nucleus

This gene is member of the following syntenic_region feature(s):

Feature Name	Unique Name	Species	Type
nonsR052	nonsR052	Nannochloropsis salina (N. salina CCMP1776)	syntenic_region

The following gene feature(s) are orthologous to this gene:

Feature Name	Unique Name	Species	Type
NO10G02420	NO10G02420	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following mRNA feature(s) are a part of this gene:

Feature Name	Unique Name	Species	Type
NSK001110t	NSK001110t	Nannochloropsis salina (N. salina CCMP1776)	mRNA