EWM20708.1, cds9965 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|585100543|gb|EWM20708.1| (hypothetical protein Naga_100551g2 [Nannochloropsis gaditana]) HSP 1 Score: 401.749 bits (1031), Expect = 9.153e-142 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0 Query: 1 MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 197 MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR Sbjct: 1 MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 197
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|553180877|ref|XP_005853475.1| (hypothetical protein NGA_0442100 [Nannochloropsis gaditana CCMP526] >gi|422295586|gb|EKU22885.1| hypothetical protein NGA_0442100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 259.996 bits (663), Expect = 2.345e-86 Identity = 142/197 (72.08%), Postives = 142/197 (72.08%), Query Frame = 0 Query: 1 MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 197 MSRRLLKYGGEALKPHFVDGRWERPLI SKR AARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR Sbjct: 1 MSRRLLKYGGEALKPHFVDGRWERPLI-----SKRV-------------------------------------------------AARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 143
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|676383533|ref|XP_009035045.1| (hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens] >gi|323454358|gb|EGB10228.1| hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens]) HSP 1 Score: 75.0998 bits (183), Expect = 2.554e-12 Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 0 Query: 85 QAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVV 190 QAA RK+A+ +G G + S GW AWD V AP++L KLH RER R +RF +E +A M KIA ++ ++ A KP PG+E+L K++ Sbjct: 884 QAADARKQALASGTFGTFDASRG--------------GWLEAWDAVAAPRVLTAPKLHKRERTRADRFASVEANLADMPKKIAAYRAAVDARKPPPGVESLMKRLT 975
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|1173952035|gb|OQR99791.1| (hypothetical protein ACHHYP_04421 [Achlya hypogyna]) HSP 1 Score: 70.0922 bits (170), Expect = 3.803e-12 Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 0 Query: 80 ILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIE 183 +L + Q A ++K A+ NG VG W T GW PAWD K ++R K HA ER +R +KI+TAMAGM KI +H+ ++ KP G+E Sbjct: 29 MLSLRQQANVKKVAIANGTVGTW--------------TAGTGGWLPAWDLPKQHNVMRTPKGHANERREADRVKKIQTAMAGMDKKIEEHRAALLKAKPIKGLE 118
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|698814238|ref|XP_009840148.1| (hypothetical protein H257_14100 [Aphanomyces astaci] >gi|574104909|gb|ETV70436.1| hypothetical protein H257_14100 [Aphanomyces astaci]) HSP 1 Score: 70.4774 bits (171), Expect = 4.820e-12 Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 0 Query: 85 QAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVA 191 Q A ++K A+ NG VG W P +G GW AWDT K ++RP K HA ER E+R +KI+ AMA M KI +H+ ++ KP G+E + A Sbjct: 51 QQATVKKVAIQNGTVGSWTPG---------QG-----GWLEAWDTQKKHTVMRPPKGHANERREEDRVKKIQAAMATMPKKIEEHRAALIKAKPVKGLEKWLNETSA 143
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|1173959667|gb|OQS05878.1| (hypothetical protein THRCLA_20509 [Thraustotheca clavata]) HSP 1 Score: 67.3958 bits (163), Expect = 4.220e-11 Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 0 Query: 81 LFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVA 191 L + Q A ++K A NG G W P GW P WD K ++RP K A ER EER +KI+TAMAGM KI +H+ ++ KP G+E + A Sbjct: 38 LSLRQQATIKKVAQANGTFGSWTPGTG--------------GWLPQWDLPKKHTVMRPPKGTANERREEERVKKIQTAMAGMDKKIEEHRAALIKAKPIKGLEKWLNETQA 134
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|669157746|ref|XP_008614435.1| (hypothetical protein SDRG_10232 [Saprolegnia diclina VS20] >gi|530733791|gb|EQC32033.1| hypothetical protein SDRG_10232 [Saprolegnia diclina VS20]) HSP 1 Score: 64.3142 bits (155), Expect = 7.048e-10 Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 0 Query: 80 ILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIE 183 +L + Q A ++K AV G +G W EG GW AWD K ++R K HA ER +R +KI+TAMAGM KI +H+ ++ KP G+E Sbjct: 29 MLSLRQQANVKKVAVQKGTIGTWTAG---------EG-----GWLAAWDLPKQHNVMRTPKGHANERREVDRVKKIQTAMAGMDKKIEEHRAALLKAKPIKGLE 118
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|813149503|ref|XP_012200398.1| (hypothetical protein SPRG_05724 [Saprolegnia parasitica CBS 223.65] >gi|641534923|gb|KDO28853.1| hypothetical protein SPRG_05724 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 63.1586 bits (152), Expect = 1.544e-9 Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 0 Query: 80 ILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIE 183 +L + Q A ++K AV G +G W EG GW AWD K ++R K HA ER +R +KI+TAMAGM KI +H+ ++ KP G+E Sbjct: 29 MLSLRQQANVKKVAVQKGTMGTWTAG---------EG-----GWLAAWDLPKQHNVMRTPKGHANERREVDRVKKIQTAMAGMDKKIEEHRAALLKAKPIKGLE 118
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|673051277|ref|XP_008879599.1| (hypothetical protein H310_13750 [Aphanomyces invadans] >gi|574464628|gb|ETV91673.1| hypothetical protein H310_13750 [Aphanomyces invadans]) HSP 1 Score: 63.1586 bits (152), Expect = 1.863e-9 Identity = 37/112 (33.04%), Postives = 56/112 (50.00%), Query Frame = 0 Query: 80 ILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVA 191 ++ + Q A ++K A+ NG +G W P +G GW WD K ++R K HA ER E+R +KI+ AMA M KI +H+ ++ KP G+E + A Sbjct: 29 MISLRQQATVKKVAIQNGTIGTWTPG---------QG-----GWLAEWDAPKKHTVMRSPKGHANERKEEDRVKKIQAAMASMPKKIEEHRAALLKAKPVKGLEKWLNETSA 126
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|695431845|ref|XP_009530788.1| (hypothetical protein PHYSODRAFT_346993 [Phytophthora sojae] >gi|348673540|gb|EGZ13359.1| hypothetical protein PHYSODRAFT_346993 [Phytophthora sojae]) HSP 1 Score: 58.9214 bits (141), Expect = 5.853e-8 Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0 Query: 87 ARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIE 183 A ++K A NG VG W+ EG GW WD + ++RP K H +RN ER +K++ A+A M +KIA+HK++++ KP G++ Sbjct: 39 AMVKKHAFRNGLVGTWE-----------EGKG---GWLETWDRPQKHHVMRPLKGHKNQRNEFERVKKVQAALAAMPSKIAEHKKAVKQAKPLKGLD 121 The following BLAST results are available for this feature:
BLAST of EWM20708.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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