EWM20708.1, cds9965 (CDS) Nannochloropsis gaditana

Overview
NameEWM20708.1
Unique Namecds9965
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:86298..86749 +
Alignment locationKK037259.1:86904..87045 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20708.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100551g2.4020.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:86298..86749 +
KK037259.1supercontigKK037259.1:86904..87045 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|585100543|gb|EWM20708.1| (hypothetical protein Naga_100551g2 [Nannochloropsis gaditana])

HSP 1 Score: 401.749 bits (1031), Expect = 9.153e-142
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
Query:    1 MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 197
            MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR
Sbjct:    1 MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 197          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|553180877|ref|XP_005853475.1| (hypothetical protein NGA_0442100 [Nannochloropsis gaditana CCMP526] >gi|422295586|gb|EKU22885.1| hypothetical protein NGA_0442100 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 259.996 bits (663), Expect = 2.345e-86
Identity = 142/197 (72.08%), Postives = 142/197 (72.08%), Query Frame = 0
Query:    1 MSRRLLKYGGEALKPHFVDGRWERPLISKRVVSKRFISLCFLPPFLPASLPPLISPSSPSFLLCMQRVPDLFIFLNHVAILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 197
            MSRRLLKYGGEALKPHFVDGRWERPLI     SKR                                                  AARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR
Sbjct:    1 MSRRLLKYGGEALKPHFVDGRWERPLI-----SKRV-------------------------------------------------AARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVAKAQKRR 143          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|676383533|ref|XP_009035045.1| (hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens] >gi|323454358|gb|EGB10228.1| hypothetical protein AURANDRAFT_71238 [Aureococcus anophagefferens])

HSP 1 Score: 75.0998 bits (183), Expect = 2.554e-12
Identity = 41/106 (38.68%), Postives = 58/106 (54.72%), Query Frame = 0
Query:   85 QAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVV 190
            QAA  RK+A+ +G  G +  S                GW  AWD V AP++L   KLH RER R +RF  +E  +A M  KIA ++ ++ A KP PG+E+L K++ 
Sbjct:  884 QAADARKQALASGTFGTFDASRG--------------GWLEAWDAVAAPRVLTAPKLHKRERTRADRFASVEANLADMPKKIAAYRAAVDARKPPPGVESLMKRLT 975          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|1173952035|gb|OQR99791.1| (hypothetical protein ACHHYP_04421 [Achlya hypogyna])

HSP 1 Score: 70.0922 bits (170), Expect = 3.803e-12
Identity = 40/104 (38.46%), Postives = 55/104 (52.88%), Query Frame = 0
Query:   80 ILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIE 183
            +L + Q A ++K A+ NG VG W              T    GW PAWD  K   ++R  K HA ER   +R +KI+TAMAGM  KI +H+ ++   KP  G+E
Sbjct:   29 MLSLRQQANVKKVAIANGTVGTW--------------TAGTGGWLPAWDLPKQHNVMRTPKGHANERREADRVKKIQTAMAGMDKKIEEHRAALLKAKPIKGLE 118          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|698814238|ref|XP_009840148.1| (hypothetical protein H257_14100 [Aphanomyces astaci] >gi|574104909|gb|ETV70436.1| hypothetical protein H257_14100 [Aphanomyces astaci])

HSP 1 Score: 70.4774 bits (171), Expect = 4.820e-12
Identity = 41/107 (38.32%), Postives = 56/107 (52.34%), Query Frame = 0
Query:   85 QAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVA 191
            Q A ++K A+ NG VG W P          +G     GW  AWDT K   ++RP K HA ER  E+R +KI+ AMA M  KI +H+ ++   KP  G+E    +  A
Sbjct:   51 QQATVKKVAIQNGTVGSWTPG---------QG-----GWLEAWDTQKKHTVMRPPKGHANERREEDRVKKIQAAMATMPKKIEEHRAALIKAKPVKGLEKWLNETSA 143          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|1173959667|gb|OQS05878.1| (hypothetical protein THRCLA_20509 [Thraustotheca clavata])

HSP 1 Score: 67.3958 bits (163), Expect = 4.220e-11
Identity = 41/111 (36.94%), Postives = 54/111 (48.65%), Query Frame = 0
Query:   81 LFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVA 191
            L + Q A ++K A  NG  G W P                 GW P WD  K   ++RP K  A ER  EER +KI+TAMAGM  KI +H+ ++   KP  G+E    +  A
Sbjct:   38 LSLRQQATIKKVAQANGTFGSWTPGTG--------------GWLPQWDLPKKHTVMRPPKGTANERREEERVKKIQTAMAGMDKKIEEHRAALIKAKPIKGLEKWLNETQA 134          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|669157746|ref|XP_008614435.1| (hypothetical protein SDRG_10232 [Saprolegnia diclina VS20] >gi|530733791|gb|EQC32033.1| hypothetical protein SDRG_10232 [Saprolegnia diclina VS20])

HSP 1 Score: 64.3142 bits (155), Expect = 7.048e-10
Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 0
Query:   80 ILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIE 183
            +L + Q A ++K AV  G +G W            EG     GW  AWD  K   ++R  K HA ER   +R +KI+TAMAGM  KI +H+ ++   KP  G+E
Sbjct:   29 MLSLRQQANVKKVAVQKGTIGTWTAG---------EG-----GWLAAWDLPKQHNVMRTPKGHANERREVDRVKKIQTAMAGMDKKIEEHRAALLKAKPIKGLE 118          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|813149503|ref|XP_012200398.1| (hypothetical protein SPRG_05724 [Saprolegnia parasitica CBS 223.65] >gi|641534923|gb|KDO28853.1| hypothetical protein SPRG_05724 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 63.1586 bits (152), Expect = 1.544e-9
Identity = 39/104 (37.50%), Postives = 54/104 (51.92%), Query Frame = 0
Query:   80 ILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIE 183
            +L + Q A ++K AV  G +G W            EG     GW  AWD  K   ++R  K HA ER   +R +KI+TAMAGM  KI +H+ ++   KP  G+E
Sbjct:   29 MLSLRQQANVKKVAVQKGTMGTWTAG---------EG-----GWLAAWDLPKQHNVMRTPKGHANERREVDRVKKIQTAMAGMDKKIEEHRAALLKAKPIKGLE 118          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|673051277|ref|XP_008879599.1| (hypothetical protein H310_13750 [Aphanomyces invadans] >gi|574464628|gb|ETV91673.1| hypothetical protein H310_13750 [Aphanomyces invadans])

HSP 1 Score: 63.1586 bits (152), Expect = 1.863e-9
Identity = 37/112 (33.04%), Postives = 56/112 (50.00%), Query Frame = 0
Query:   80 ILFVCQAARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIETLYKKVVA 191
            ++ + Q A ++K A+ NG +G W P          +G     GW   WD  K   ++R  K HA ER  E+R +KI+ AMA M  KI +H+ ++   KP  G+E    +  A
Sbjct:   29 MISLRQQATVKKVAIQNGTIGTWTPG---------QG-----GWLAEWDAPKKHTVMRSPKGHANERKEEDRVKKIQAAMASMPKKIEEHRAALLKAKPVKGLEKWLNETSA 126          
BLAST of EWM20708.1 vs. NCBI_GenBank
Match: gi|695431845|ref|XP_009530788.1| (hypothetical protein PHYSODRAFT_346993 [Phytophthora sojae] >gi|348673540|gb|EGZ13359.1| hypothetical protein PHYSODRAFT_346993 [Phytophthora sojae])

HSP 1 Score: 58.9214 bits (141), Expect = 5.853e-8
Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0
Query:   87 ARLRKEAVMNGRVGPWQPSVQDSNGEKREGTKQVLGWDPAWDTVKAPKILRPAKLHARERNREERFQKIETAMAGMAAKIAQHKESMRALKPKPGIE 183
            A ++K A  NG VG W+           EG     GW   WD  +   ++RP K H  +RN  ER +K++ A+A M +KIA+HK++++  KP  G++
Sbjct:   39 AMVKKHAFRNGLVGTWE-----------EGKG---GWLETWDRPQKHHVMRPLKGHKNQRNEFERVKKVQAALAAMPSKIAEHKKAVKQAKPLKGLD 121          
The following BLAST results are available for this feature:
BLAST of EWM20708.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100543|gb|EWM20708.1|9.153e-142100.00hypothetical protein Naga_100551g2 [Nannochloropsi... [more]
gi|553180877|ref|XP_005853475.1|2.345e-8672.08hypothetical protein NGA_0442100 [Nannochloropsis ... [more]
gi|676383533|ref|XP_009035045.1|2.554e-1238.68hypothetical protein AURANDRAFT_71238 [Aureococcus... [more]
gi|1173952035|gb|OQR99791.1|3.803e-1238.46hypothetical protein ACHHYP_04421 [Achlya hypogyna... [more]
gi|698814238|ref|XP_009840148.1|4.820e-1238.32hypothetical protein H257_14100 [Aphanomyces astac... [more]
gi|1173959667|gb|OQS05878.1|4.220e-1136.94hypothetical protein THRCLA_20509 [Thraustotheca c... [more]
gi|669157746|ref|XP_008614435.1|7.048e-1037.50hypothetical protein SDRG_10232 [Saprolegnia dicli... [more]
gi|813149503|ref|XP_012200398.1|1.544e-937.50hypothetical protein SPRG_05724 [Saprolegnia paras... [more]
gi|673051277|ref|XP_008879599.1|1.863e-933.04hypothetical protein H310_13750 [Aphanomyces invad... [more]
gi|695431845|ref|XP_009530788.1|5.853e-835.05hypothetical protein PHYSODRAFT_346993 [Phytophtho... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9996rna9996Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications