EWM20712.1, cds9960 (CDS) Nannochloropsis gaditana

Overview
NameEWM20712.1
Unique Namecds9960
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:69238..69705 -
Alignment locationKK037259.1:68854..68978 -
Alignment locationKK037259.1:68544..68700 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20712.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101419g2.10433.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:69238..69705 -
KK037259.1supercontigKK037259.1:68854..68978 -
KK037259.1supercontigKK037259.1:68544..68700 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
Homology
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|585100555|gb|EWM20712.1| (hypothetical protein Naga_101419g2 [Nannochloropsis gaditana])

HSP 1 Score: 496.893 bits (1278), Expect = 1.515e-177
Identity = 249/249 (100.00%), Postives = 249/249 (100.00%), Query Frame = 0
Query:    1 MKVTVRTRGSSHQKASFCLLAAVLTAKAFQVPSLPCALPSTSSLPRSHYSSDPPLCQRTRIPAASPFLSVAFGHRVRRRGPPLVFSQSLMDTIITPTRIESLPGFTVVERIDGLAFVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLLALGTGRARALVRYEGGREGGRARG 249
            MKVTVRTRGSSHQKASFCLLAAVLTAKAFQVPSLPCALPSTSSLPRSHYSSDPPLCQRTRIPAASPFLSVAFGHRVRRRGPPLVFSQSLMDTIITPTRIESLPGFTVVERIDGLAFVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLLALGTGRARALVRYEGGREGGRARG
Sbjct:    1 MKVTVRTRGSSHQKASFCLLAAVLTAKAFQVPSLPCALPSTSSLPRSHYSSDPPLCQRTRIPAASPFLSVAFGHRVRRRGPPLVFSQSLMDTIITPTRIESLPGFTVVERIDGLAFVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLLALGTGRARALVRYEGGREGGRARG 249          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|504987572|ref|WP_015174674.1| (alpha/beta hydrolase [Oscillatoria nigro-viridis] >gi|428239558|gb|AFZ05344.1| alpha/beta hydrolase fold protein [Oscillatoria nigro-viridis PCC 7112])

HSP 1 Score: 68.5514 bits (166), Expect = 5.068e-10
Identity = 38/97 (39.18%), Postives = 54/97 (55.67%), Query Frame = 0
Query:  129 TPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLL 225
            TP      R   ++LPG+DGSG  L PQIS L   FD+  L++PADD ++   +V   I  +E  ++     AG+ +    L GESFGG LA+  +L
Sbjct:   12 TPKPPKPDRPLFVFLPGMDGSGLLLRPQISKLANHFDIRCLTVPADDMASWEVLVSETIALIEAEKQ-----AGKPKRPVYLCGESFGGCLAMKTVL 103          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|693498994|emb|CEG01641.1| (Diacylglycerol acyltransferase [Ostreococcus tauri])

HSP 1 Score: 68.9366 bits (167), Expect = 9.716e-10
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0
Query:  116 FVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHV 223
             VR     S+ +ST P A       +YLPGLDG+G +   Q   +V EFD+  L++PA DR  +  +V+ V  +LE R E   ++         LIGES GGLL++ V
Sbjct:   31 LVRSRERASTSASTKPLA-------VYLPGLDGTGFSAASQFEYIVNEFDLVALNVPASDRGDIFDLVNVVTSYLEARAERSDVY---------LIGESMGGLLSLCV 122          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|1199292077|gb|OUS47167.1| (Alpha/Beta hydrolase protein [Ostreococcus tauri])

HSP 1 Score: 68.1662 bits (165), Expect = 1.513e-9
Identity = 41/108 (37.96%), Postives = 58/108 (53.70%), Query Frame = 0
Query:  116 FVRYNHSTSSPSSTPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHV 223
             VR     S+ +ST P A       +YLPGLDG+G +   Q   +V EFD+  L++PA DR  +  +V+ V  +LE R E   ++         LIGES GGLL++ V
Sbjct:   83 LVRSRERASTSASTKPLA-------VYLPGLDGTGFSAASQFEYIVNEFDLVALNVPASDRGDIFDLVNVVTSYLEARAERGDVY---------LIGESMGGLLSLCV 174          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|298713739|emb|CBJ48930.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 67.781 bits (164), Expect = 2.580e-9
Identity = 48/134 (35.82%), Postives = 78/134 (58.21%), Query Frame = 0
Query:  111 IDGLAFVRYNHSTS----SPSSTPPAASGKRGE-----VLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLLALGTGRARAL 235
            I G++F R+  + +    SPS+T  AA+G + +     +LYLPG++G G ++ PQ+  L ++FDV+ L I A+DRS  S +  AV + ++    E     G ++   V++GESFG +L I  L  L  GR +A+
Sbjct:  108 ILGVSFERWRKNDANGPASPSATGGAANGSKVDGDKMVLLYLPGIEGLGTSVEPQLPALSEKFDVFRLIIGAEDRSTFSTLSRAVTQFVDVTSGE----GGGNQKKTVVLGESFGAMLGIR-LGQLRPGRVQAV 236          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|553180778|ref|XP_005853461.1| (hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526] >gi|422295599|gb|EKU22898.1| hypothetical protein NGA_0456400, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 63.1586 bits (152), Expect = 8.076e-8
Identity = 39/95 (41.05%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  131 PAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLL 225
            PA+S  +  +LYLPGLDGSG T   Q   L + F+V  +++P  DRS+   ++H V      R E RS    R      ++GESFGGLLA+  +L
Sbjct:  528 PASSPSKPLLLYLPGLDGSGLTAFVQYPSLAEAFEVRCMTMPTTDRSSFLDLIHLV------RTEIRSFPGRRV----FVMGESFGGLLALGTVL 612          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|612399772|ref|XP_007515405.1| (predicted protein [Bathycoccus prasinos] >gi|412993773|emb|CCO14284.1| predicted protein [Bathycoccus prasinos])

HSP 1 Score: 62.7734 bits (151), Expect = 1.126e-7
Identity = 35/86 (40.70%), Postives = 54/86 (62.79%), Query Frame = 0
Query:  140 VLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLL 225
            ++YLPGLDG+G +   Q + L +EFD+  L+IP++DRS + ++V  V   +E  +EE   H  R+     LIGES GG +++ V L
Sbjct:  106 MIYLPGLDGTGFSASSQFATLSKEFDLVCLNIPSNDRSDVFEIVDIVRAFIERAKEE---HPEREVQ---LIGESMGGAMSLFVCL 185          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|629089533|gb|KCW55786.1| (hypothetical protein EUGRSUZ_I01613 [Eucalyptus grandis])

HSP 1 Score: 62.7734 bits (151), Expect = 1.269e-7
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 0
Query:  126 PSSTPPAASGKRGE----VLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDR--HCPV-LIGESFGGLLAIHV 223
            P    P   G R E    +LYLPGLDG+G  L  Q   L + FD+W L IP  DR++   +V  V         ER++ A  DR  + P+ L+GES GG LA+ V
Sbjct:  122 PRWFSPLECGSRLEKSPLLLYLPGLDGTGAGLTSQYKKLGKVFDIWCLHIPVMDRTSFLDLVRMV---------ERTIKAETDRSPNRPIYLVGESLGGCLALAV 217          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|702464632|ref|XP_010028956.1| (PREDICTED: acyltransferase-like protein At3g26840, chloroplastic [Eucalyptus grandis])

HSP 1 Score: 62.7734 bits (151), Expect = 1.275e-7
Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 0
Query:  126 PSSTPPAASGKRGE----VLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDR--HCPV-LIGESFGGLLAIHV 223
            P    P   G R E    +LYLPGLDG+G  L  Q   L + FD+W L IP  DR++   +V  V         ER++ A  DR  + P+ L+GES GG LA+ V
Sbjct:  133 PRWFSPLECGSRLEKSPLLLYLPGLDGTGAGLTSQYKKLGKVFDIWCLHIPVMDRTSFLDLVRMV---------ERTIKAETDRSPNRPIYLVGESLGGCLALAV 228          
BLAST of EWM20712.1 vs. NCBI_GenBank
Match: gi|493683066|ref|WP_006633214.1| (alpha/beta hydrolase [Microcoleus vaginatus] >gi|333459043|gb|EGK87658.1| alpha/beta hydrolase fold-containing protein [Microcoleus vaginatus FGP-2])

HSP 1 Score: 61.6178 bits (148), Expect = 1.362e-7
Identity = 36/97 (37.11%), Postives = 51/97 (52.58%), Query Frame = 0
Query:  129 TPPAASGKRGEVLYLPGLDGSGCTLGPQISDLVQEFDVWVLSIPADDRSALSKVVHAVIRHLEGREEERSLHAGRDRHCPVLIGESFGGLLAIHVLL 225
            TP      R   ++LPG+DG G  L  QI  L   FD+  L++PADD  +   +V   I  +E  ++     AG+ +    L GESFGG LA+ V+L
Sbjct:   12 TPKPPKPDRPLFVFLPGMDGGGLLLRSQIPKLANHFDIRCLTLPADDTPSWDVLVGETIALIEAEKQ-----AGKPKRPVYLCGESFGGCLAMKVML 103          
The following BLAST results are available for this feature:
BLAST of EWM20712.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100555|gb|EWM20712.1|1.515e-177100.00hypothetical protein Naga_101419g2 [Nannochloropsi... [more]
gi|504987572|ref|WP_015174674.1|5.068e-1039.18alpha/beta hydrolase [Oscillatoria nigro-viridis] ... [more]
gi|693498994|emb|CEG01641.1|9.716e-1037.96Diacylglycerol acyltransferase [Ostreococcus tauri... [more]
gi|1199292077|gb|OUS47167.1|1.513e-937.96Alpha/Beta hydrolase protein [Ostreococcus tauri][more]
gi|298713739|emb|CBJ48930.1|2.580e-935.82conserved unknown protein [Ectocarpus siliculosus][more]
gi|553180778|ref|XP_005853461.1|8.076e-841.05hypothetical protein NGA_0456400, partial [Nannoch... [more]
gi|612399772|ref|XP_007515405.1|1.126e-740.70predicted protein [Bathycoccus prasinos] >gi|41299... [more]
gi|629089533|gb|KCW55786.1|1.269e-740.00hypothetical protein EUGRSUZ_I01613 [Eucalyptus gr... [more]
gi|702464632|ref|XP_010028956.1|1.275e-740.00PREDICTED: acyltransferase-like protein At3g26840,... [more]
gi|493683066|ref|WP_006633214.1|1.362e-737.11alpha/beta hydrolase [Microcoleus vaginatus] >gi|3... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9991rna9991Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications