EWM20723.1, cds9952 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|585100571|gb|EWM20723.1| (quinol-to-oxygen oxidoreductase [Nannochloropsis gaditana]) HSP 1 Score: 413.69 bits (1062), Expect = 2.870e-146 Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0 Query: 1 MPSSTFFLSIRFFSFPSCLPLPHLSAYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAEQVEEEEEEEVARSVEEEWWREYDALGKGRGWDGEGGEGGGEGGEWGEEVEFE 202 MPSSTFFLSIRFFSFPSCLPLPHLSAYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAEQVEEEEEEEVARSVEEEWWREYDALGKGRGWDGEGGEGGGEGGEWGEEVEFE Sbjct: 1 MPSSTFFLSIRFFSFPSCLPLPHLSAYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAEQVEEEEEEEVARSVEEEWWREYDALGKGRGWDGEGGEGGGEGGEWGEEVEFE 202
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|1199289115|gb|OUS44250.1| (quinol-to-oxygen oxidoreductase [Ostreococcus tauri]) HSP 1 Score: 168.318 bits (425), Expect = 3.593e-46 Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = 0 Query: 27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAA 147 YY +L L++ +SP LAYNFSELIE+HAVDTY+QF+D+N +LL+ +PAPR+A++YY DLY+FDEFQT R V+TRRP IR+LYDVFS IRDDE EHV T+NACQ D + SPN+ A A Sbjct: 326 YYGVLILLWFMSPALAYNFSELIEAHAVDTYAQFVDQNAELLKTMPAPRIAVEYYEGADLYLFDEFQTAREVRTRRPRIRTLYDVFSNIRDDEGEHVSTMNACQKEDAAVSSPNSVNAKTA 446
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|308812468|ref|XP_003083541.1| (quinol-to-oxygen oxidoreductase (ISS) [Ostreococcus tauri] >gi|116055422|emb|CAL58090.1| Alternative oxidase [Ostreococcus tauri]) HSP 1 Score: 167.933 bits (424), Expect = 4.682e-46 Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = 0 Query: 27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAA 147 YY +L L++ +SP LAYNFSELIE+HAVDTY+QF+D+N +LL+ +PAPR+A++YY DLY+FDEFQT R V+TRRP IR+LYDVFS IRDDE EHV T+NACQ D + SPN+ A A Sbjct: 328 YYGVLILLWFMSPALAYNFSELIEAHAVDTYAQFVDQNAELLKTMPAPRIAVEYYEGADLYLFDEFQTAREVRTRRPRIRTLYDVFSNIRDDEGEHVSTMNACQKEDAAVSSPNSVNAKTA 448
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|145354902|ref|XP_001421713.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144581951|gb|ABP00007.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 160.614 bits (405), Expect = 7.837e-46 Identity = 76/115 (66.09%), Postives = 92/115 (80.00%), Query Frame = 0 Query: 26 AYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPN 140 YY++L ++LISP LAYNFSELIE HAVDTY QF+D+N +LL+ +PAPR+A++YY DLY+FDEFQT R V+ RRP IRSL+DVFS IRDDE EHV T+NACQ D I SPN Sbjct: 126 VYYFVLVALWLISPALAYNFSELIEGHAVDTYGQFVDQNAELLKSMPAPRIAVEYYEAADLYLFDEFQTAREVRLRRPQIRSLFDVFSNIRDDEGEHVNTMNACQREDSDISSPN 240
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|873232647|emb|CEM05282.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 168.703 bits (426), Expect = 2.424e-45 Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 0 Query: 27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQ-VADEVILSPNAAAAHAAWAEQVEEEEEEE 159 YYW+L L+FLISP AYNFSELIE HAVDTY QF+ +N+ +L+RLPAP VA++YY GDLYMFDEFQT+RP Q+RRP I +LYDVF+ IRDDE EHVKT++ACQ + +++SPNAAAA A A E + EE Sbjct: 527 YYWVLILLFLISPTWAYNFSELIEWHAVDTYGQFVSQNKQILKRLPAPAVAMEYYKSGDLYMFDEFQTSRPAQSRRPQINNLYDVFTTIRDDELEHVKTMSACQRLEAAMVMSPNAAAAAAGMAPWAESDREEN 660
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|168049162|ref|XP_001777033.1| (predicted protein [Physcomitrella patens] >gi|162671598|gb|EDQ58147.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 157.147 bits (396), Expect = 8.368e-45 Identity = 75/114 (65.79%), Postives = 90/114 (78.95%), Query Frame = 0 Query: 27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPN 140 YYW+LNLMFLISP++AYNFSELIE HAVDTY +F D NE+LL+ LP P AL+YY DLYM+DEFQT++ +TRRP I +LYDVF AI DE EHVKT++ACQ D I SP+ Sbjct: 87 YYWVLNLMFLISPKVAYNFSELIEMHAVDTYGEFADANEELLKTLPPPPAALEYYESEDLYMYDEFQTSQAPETRRPKINNLYDVFKAISGDELEHVKTMSACQTLDMPIKSPH 200
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|1026761958|gb|OAE23311.1| (hypothetical protein AXG93_1713s1110 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 161.384 bits (407), Expect = 5.692e-44 Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = 0 Query: 27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPN 140 YYW LN MFLISP +AYNFSELIESHAVDTY +F DENE+LL+ LP VA+ YY GDLYM+DEFQT+RP ++RRP + SLYDVF AI DE EHVKT+ ACQ D ++SPN Sbjct: 325 YYWTLNAMFLISPTVAYNFSELIESHAVDTYGEFADENEELLKTLPPSPVAVAYYESGDLYMYDEFQTSRPPESRRPKMGSLYDVFMAICGDEGEHVKTMVACQQLDTQVVSPN 438
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|873232880|emb|CEM04265.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 160.999 bits (406), Expect = 1.650e-43 Identity = 82/136 (60.29%), Postives = 106/136 (77.94%), Query Frame = 0 Query: 26 AYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAEQVEEEEEEEVA 161 YYW++ +FLISP AYNFSEL+E HA DTY++F+++N+D L+RLPAP VAL+YY GDLY+FDEFQ++RP ++RRP I +LYDVF IRDDE EHVKT++ACQ + + SPNAAAA A A E ++EEE A Sbjct: 349 VYYWVVIFLFLISPTWAYNFSELVEWHATDTYAEFVEQNKDRLKRLPAPAVALEYYNGGDLYLFDEFQSSRPAESRRPNIDNLYDVFVTIRDDELEHVKTMSACQRLESAMKSPNAAAAAAGLAPWAEPDKEEEPA 484
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|302805482|ref|XP_002984492.1| (hypothetical protein SELMODRAFT_120335 [Selaginella moellendorffii] >gi|300147880|gb|EFJ14542.1| hypothetical protein SELMODRAFT_120335 [Selaginella moellendorffii]) HSP 1 Score: 152.525 bits (384), Expect = 1.651e-42 Identity = 75/120 (62.50%), Postives = 90/120 (75.00%), Query Frame = 0 Query: 27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHA 146 YYWILN MF +SP++AYNFSELIE HAVDTY QF DENE+LL++LP A+ YY DLYMFDEFQT+R ++RRP + SLYDVF AI+ DE EHVKT+ ACQ A E + SP+ A Sbjct: 137 YYWILNFMFFVSPKVAYNFSELIEMHAVDTYGQFFDENEELLKQLPPSPEAVAYYENEDLYMFDEFQTSRAPESRRPKVDSLYDVFVAIKGDEFEHVKTMAACQRA-ETVASPHKIKKQA 255
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|302782501|ref|XP_002973024.1| (hypothetical protein SELMODRAFT_98486 [Selaginella moellendorffii] >gi|300159625|gb|EFJ26245.1| hypothetical protein SELMODRAFT_98486 [Selaginella moellendorffii]) HSP 1 Score: 152.525 bits (384), Expect = 1.669e-42 Identity = 75/120 (62.50%), Postives = 91/120 (75.83%), Query Frame = 0 Query: 27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHA 146 YYWILN MF +SP++AYNFSELIE HAVDTY QF+DENE+LL++LP A+ YY DLYMFDEFQT+R ++RRP + SLYDVF AI+ DE EHVKT+ ACQ A E + SP+ A Sbjct: 137 YYWILNFMFFVSPKVAYNFSELIEMHAVDTYGQFVDENEELLKQLPPSPEAVAYYENEDLYMFDEFQTSRAPESRRPKVDSLYDVFVAIKGDEFEHVKTMAACQRA-ETVASPHKIKKQA 255 The following BLAST results are available for this feature:
BLAST of EWM20723.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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