EWM20723.1, cds9952 (CDS) Nannochloropsis gaditana

Overview
NameEWM20723.1
Unique Namecds9952
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:51646..51874 -
Alignment locationKK037259.1:51241..51313 -
Alignment locationKK037259.1:50774..51080 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20723.1
Productquinol-to-oxygen oxidoreductase
Orig transcript idgnl|cribi|Naga_100876g3.6818.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:51646..51874 -
KK037259.1supercontigKK037259.1:51241..51313 -
KK037259.1supercontigKK037259.1:50774..51080 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
GO:0009916alternative oxidase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0055114oxidation-reduction process
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002680AOX
Homology
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|585100571|gb|EWM20723.1| (quinol-to-oxygen oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 413.69 bits (1062), Expect = 2.870e-146
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0
Query:    1 MPSSTFFLSIRFFSFPSCLPLPHLSAYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAEQVEEEEEEEVARSVEEEWWREYDALGKGRGWDGEGGEGGGEGGEWGEEVEFE 202
            MPSSTFFLSIRFFSFPSCLPLPHLSAYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAEQVEEEEEEEVARSVEEEWWREYDALGKGRGWDGEGGEGGGEGGEWGEEVEFE
Sbjct:    1 MPSSTFFLSIRFFSFPSCLPLPHLSAYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAEQVEEEEEEEVARSVEEEWWREYDALGKGRGWDGEGGEGGGEGGEWGEEVEFE 202          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|1199289115|gb|OUS44250.1| (quinol-to-oxygen oxidoreductase [Ostreococcus tauri])

HSP 1 Score: 168.318 bits (425), Expect = 3.593e-46
Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = 0
Query:   27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAA 147
            YY +L L++ +SP LAYNFSELIE+HAVDTY+QF+D+N +LL+ +PAPR+A++YY   DLY+FDEFQT R V+TRRP IR+LYDVFS IRDDE EHV T+NACQ  D  + SPN+  A  A
Sbjct:  326 YYGVLILLWFMSPALAYNFSELIEAHAVDTYAQFVDQNAELLKTMPAPRIAVEYYEGADLYLFDEFQTAREVRTRRPRIRTLYDVFSNIRDDEGEHVSTMNACQKEDAAVSSPNSVNAKTA 446          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|308812468|ref|XP_003083541.1| (quinol-to-oxygen oxidoreductase (ISS) [Ostreococcus tauri] >gi|116055422|emb|CAL58090.1| Alternative oxidase [Ostreococcus tauri])

HSP 1 Score: 167.933 bits (424), Expect = 4.682e-46
Identity = 77/121 (63.64%), Postives = 97/121 (80.17%), Query Frame = 0
Query:   27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAA 147
            YY +L L++ +SP LAYNFSELIE+HAVDTY+QF+D+N +LL+ +PAPR+A++YY   DLY+FDEFQT R V+TRRP IR+LYDVFS IRDDE EHV T+NACQ  D  + SPN+  A  A
Sbjct:  328 YYGVLILLWFMSPALAYNFSELIEAHAVDTYAQFVDQNAELLKTMPAPRIAVEYYEGADLYLFDEFQTAREVRTRRPRIRTLYDVFSNIRDDEGEHVSTMNACQKEDAAVSSPNSVNAKTA 448          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|145354902|ref|XP_001421713.1| (predicted protein, partial [Ostreococcus lucimarinus CCE9901] >gi|144581951|gb|ABP00007.1| predicted protein, partial [Ostreococcus lucimarinus CCE9901])

HSP 1 Score: 160.614 bits (405), Expect = 7.837e-46
Identity = 76/115 (66.09%), Postives = 92/115 (80.00%), Query Frame = 0
Query:   26 AYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPN 140
             YY++L  ++LISP LAYNFSELIE HAVDTY QF+D+N +LL+ +PAPR+A++YY   DLY+FDEFQT R V+ RRP IRSL+DVFS IRDDE EHV T+NACQ  D  I SPN
Sbjct:  126 VYYFVLVALWLISPALAYNFSELIEGHAVDTYGQFVDQNAELLKSMPAPRIAVEYYEAADLYLFDEFQTAREVRLRRPQIRSLFDVFSNIRDDEGEHVNTMNACQREDSDISSPN 240          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|873232647|emb|CEM05282.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 168.703 bits (426), Expect = 2.424e-45
Identity = 86/134 (64.18%), Postives = 106/134 (79.10%), Query Frame = 0
Query:   27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQ-VADEVILSPNAAAAHAAWAEQVEEEEEEE 159
            YYW+L L+FLISP  AYNFSELIE HAVDTY QF+ +N+ +L+RLPAP VA++YY  GDLYMFDEFQT+RP Q+RRP I +LYDVF+ IRDDE EHVKT++ACQ +   +++SPNAAAA A  A   E + EE 
Sbjct:  527 YYWVLILLFLISPTWAYNFSELIEWHAVDTYGQFVSQNKQILKRLPAPAVAMEYYKSGDLYMFDEFQTSRPAQSRRPQINNLYDVFTTIRDDELEHVKTMSACQRLEAAMVMSPNAAAAAAGMAPWAESDREEN 660          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|168049162|ref|XP_001777033.1| (predicted protein [Physcomitrella patens] >gi|162671598|gb|EDQ58147.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 157.147 bits (396), Expect = 8.368e-45
Identity = 75/114 (65.79%), Postives = 90/114 (78.95%), Query Frame = 0
Query:   27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPN 140
            YYW+LNLMFLISP++AYNFSELIE HAVDTY +F D NE+LL+ LP P  AL+YY   DLYM+DEFQT++  +TRRP I +LYDVF AI  DE EHVKT++ACQ  D  I SP+
Sbjct:   87 YYWVLNLMFLISPKVAYNFSELIEMHAVDTYGEFADANEELLKTLPPPPAALEYYESEDLYMYDEFQTSQAPETRRPKINNLYDVFKAISGDELEHVKTMSACQTLDMPIKSPH 200          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|1026761958|gb|OAE23311.1| (hypothetical protein AXG93_1713s1110 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 161.384 bits (407), Expect = 5.692e-44
Identity = 77/114 (67.54%), Postives = 90/114 (78.95%), Query Frame = 0
Query:   27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPN 140
            YYW LN MFLISP +AYNFSELIESHAVDTY +F DENE+LL+ LP   VA+ YY  GDLYM+DEFQT+RP ++RRP + SLYDVF AI  DE EHVKT+ ACQ  D  ++SPN
Sbjct:  325 YYWTLNAMFLISPTVAYNFSELIESHAVDTYGEFADENEELLKTLPPSPVAVAYYESGDLYMYDEFQTSRPPESRRPKMGSLYDVFMAICGDEGEHVKTMVACQQLDTQVVSPN 438          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|873232880|emb|CEM04265.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 160.999 bits (406), Expect = 1.650e-43
Identity = 82/136 (60.29%), Postives = 106/136 (77.94%), Query Frame = 0
Query:   26 AYYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHAAWAEQVEEEEEEEVA 161
             YYW++  +FLISP  AYNFSEL+E HA DTY++F+++N+D L+RLPAP VAL+YY  GDLY+FDEFQ++RP ++RRP I +LYDVF  IRDDE EHVKT++ACQ  +  + SPNAAAA A  A   E ++EEE A
Sbjct:  349 VYYWVVIFLFLISPTWAYNFSELVEWHATDTYAEFVEQNKDRLKRLPAPAVALEYYNGGDLYLFDEFQSSRPAESRRPNIDNLYDVFVTIRDDELEHVKTMSACQRLESAMKSPNAAAAAAGLAPWAEPDKEEEPA 484          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|302805482|ref|XP_002984492.1| (hypothetical protein SELMODRAFT_120335 [Selaginella moellendorffii] >gi|300147880|gb|EFJ14542.1| hypothetical protein SELMODRAFT_120335 [Selaginella moellendorffii])

HSP 1 Score: 152.525 bits (384), Expect = 1.651e-42
Identity = 75/120 (62.50%), Postives = 90/120 (75.00%), Query Frame = 0
Query:   27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHA 146
            YYWILN MF +SP++AYNFSELIE HAVDTY QF DENE+LL++LP    A+ YY   DLYMFDEFQT+R  ++RRP + SLYDVF AI+ DE EHVKT+ ACQ A E + SP+     A
Sbjct:  137 YYWILNFMFFVSPKVAYNFSELIEMHAVDTYGQFFDENEELLKQLPPSPEAVAYYENEDLYMFDEFQTSRAPESRRPKVDSLYDVFVAIKGDEFEHVKTMAACQRA-ETVASPHKIKKQA 255          
BLAST of EWM20723.1 vs. NCBI_GenBank
Match: gi|302782501|ref|XP_002973024.1| (hypothetical protein SELMODRAFT_98486 [Selaginella moellendorffii] >gi|300159625|gb|EFJ26245.1| hypothetical protein SELMODRAFT_98486 [Selaginella moellendorffii])

HSP 1 Score: 152.525 bits (384), Expect = 1.669e-42
Identity = 75/120 (62.50%), Postives = 91/120 (75.83%), Query Frame = 0
Query:   27 YYWILNLMFLISPRLAYNFSELIESHAVDTYSQFLDENEDLLRRLPAPRVALDYYVMGDLYMFDEFQTTRPVQTRRPLIRSLYDVFSAIRDDESEHVKTINACQVADEVILSPNAAAAHA 146
            YYWILN MF +SP++AYNFSELIE HAVDTY QF+DENE+LL++LP    A+ YY   DLYMFDEFQT+R  ++RRP + SLYDVF AI+ DE EHVKT+ ACQ A E + SP+     A
Sbjct:  137 YYWILNFMFFVSPKVAYNFSELIEMHAVDTYGQFVDENEELLKQLPPSPEAVAYYENEDLYMFDEFQTSRAPESRRPKVDSLYDVFVAIKGDEFEHVKTMAACQRA-ETVASPHKIKKQA 255          
The following BLAST results are available for this feature:
BLAST of EWM20723.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100571|gb|EWM20723.1|2.870e-146100.00quinol-to-oxygen oxidoreductase [Nannochloropsis g... [more]
gi|1199289115|gb|OUS44250.1|3.593e-4663.64quinol-to-oxygen oxidoreductase [Ostreococcus taur... [more]
gi|308812468|ref|XP_003083541.1|4.682e-4663.64quinol-to-oxygen oxidoreductase (ISS) [Ostreococcu... [more]
gi|145354902|ref|XP_001421713.1|7.837e-4666.09predicted protein, partial [Ostreococcus lucimarin... [more]
gi|873232647|emb|CEM05282.1|2.424e-4564.18unnamed protein product [Vitrella brassicaformis C... [more]
gi|168049162|ref|XP_001777033.1|8.368e-4565.79predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|1026761958|gb|OAE23311.1|5.692e-4467.54hypothetical protein AXG93_1713s1110 [Marchantia p... [more]
gi|873232880|emb|CEM04265.1|1.650e-4360.29unnamed protein product [Vitrella brassicaformis C... [more]
gi|302805482|ref|XP_002984492.1|1.651e-4262.50hypothetical protein SELMODRAFT_120335 [Selaginell... [more]
gi|302782501|ref|XP_002973024.1|1.669e-4262.50hypothetical protein SELMODRAFT_98486 [Selaginella... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9983rna9983Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications