EWM20721.1, cds9950 (CDS) Nannochloropsis gaditana

Overview
NameEWM20721.1
Unique Namecds9950
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:47613..47615 +
Alignment locationKK037259.1:47780..47954 +
Alignment locationKK037259.1:48117..48379 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20721.1
Productamidotransferase
Orig transcript idgnl|cribi|Naga_100876g1.6816.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:47613..47615 +
KK037259.1supercontigKK037259.1:47780..47954 +
KK037259.1supercontigKK037259.1:48117..48379 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016740transferase activity
GO:0016884carbon-nitrogen ligase activity, with glutamine as amido-N-donor
Vocabulary: INTERPRO
TermDefinition
IPR023631Amidase_dom
IPR000120Amidase
Homology
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|585100569|gb|EWM20721.1| (amidotransferase [Nannochloropsis gaditana])

HSP 1 Score: 296.204 bits (757), Expect = 1.495e-101
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0
Query:    1 MLPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREPFGGGGRTDGRNEERERDVASLVQYQGPRTREEAARLCGVEDIGMEGKQLREVSRSFL 146
            MLPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREPFGGGGRTDGRNEERERDVASLVQYQGPRTREEAARLCGVEDIGMEGKQLREVSRSFL
Sbjct:    1 MLPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREPFGGGGRTDGRNEERERDVASLVQYQGPRTREEAARLCGVEDIGMEGKQLREVSRSFL 146          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|553194224|ref|XP_005855912.1| (amidase, partial [Nannochloropsis gaditana CCMP526] >gi|422293156|gb|EKU20456.1| amidase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 105.531 bits (262), Expect = 1.995e-27
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0
Query:    9 LRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMI 59
            LRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMI
Sbjct:    1 LRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMI 51          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|1177839457|ref|WP_082865991.1| (hypothetical protein [Sulfitobacter sp. HI0129])

HSP 1 Score: 86.6557 bits (213), Expect = 1.553e-19
Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    2 LPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREP 89
            +PP+  + R+PTH+  T L +YIDW+ L+ V++L+  P++S+PCGLT++G PVGLQ++G P  +  +LA A L ET   F S +P  P
Sbjct:    1 MPPYPVDQRFPTHIGDTELTTYIDWMFLTFVLSLTGCPAISIPCGLTQNGLPVGLQLLGKPKGDYDLLAAAKLLETELGFASQMPIRP 88          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|1056480690|ref|WP_067920678.1| (MULTISPECIES: amidase [Sulfitobacter] >gi|1024474147|gb|KZY04709.1| amidase [Sulfitobacter sp. HI0023] >gi|1024505525|gb|KZY26742.1| amidase [Sulfitobacter sp. HI0040])

HSP 1 Score: 87.8113 bits (216), Expect = 1.821e-17
Identity = 40/88 (45.45%), Postives = 61/88 (69.32%), Query Frame = 0
Query:    2 LPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREP 89
            +PP+  + R+PTH+  T L +YIDW+ L+ V++L+  P++S+PCGLT++G PVGLQ++G P  +  +LA A L ET   F S +P  P
Sbjct:  375 VPPYPVDQRFPTHIGDTELTTYIDWMFLTFVLSLTGCPAISIPCGLTQNGLPVGLQLLGKPKGDYDLLAAAKLLETELGFASQMPIRP 462          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|1113124928|gb|OJU00491.1| (amidase [Rhizobiales bacterium 65-79])

HSP 1 Score: 87.4261 bits (215), Expect = 2.589e-17
Identity = 43/88 (48.86%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    2 LPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREP 89
            L P   E  YP  VA  P+  YIDWLR S + T +  P+LSLP G TR G PVG+Q+IGPP  EA++LA+A   E A  F    P +P
Sbjct:  398 LEPTPVEQEYPAEVAGKPVADYIDWLRFSFLATTTALPALSLPAGFTRSGMPVGIQLIGPPRGEAKLLAVAKAIEDAVGFRGRTPIDP 485          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|873237526|emb|CEL97677.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 86.6557 bits (213), Expect = 4.437e-17
Identity = 37/81 (45.68%), Postives = 54/81 (66.67%), Query Frame = 0
Query:    2 LPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDG--RPVGLQMIGPPYSEARMLALAALYETAHP 80
            +PPF   +RYP+ + +   P Y +W RL+S+++LSC P+LSLP G T      P+GLQ++ PP+ E  +L  A+LYE AHP
Sbjct:  434 IPPFDHRIRYPSRIGSMTFPFYTEWFRLTSIMSLSCCPTLSLPVGFTSTSPPLPIGLQVVAPPFREKSLLQFASLYEEAHP 514          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|575408062|gb|ETW94698.1| (hypothetical protein ETSY2_49355, partial [Candidatus Entotheonella sp. TSY2])

HSP 1 Score: 85.5001 bits (210), Expect = 5.462e-17
Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 0
Query:    2 LPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPR 87
            +PPF  E  YPT +    L +YIDW+ L   +T++  PS+S+PCG T DG PVGLQ++GPP+++  +L LA  +E A  F+   P+
Sbjct:  244 VPPFSIEQEYPTEINGQQLETYIDWMGLCYAITVTGCPSISVPCGFTPDGLPVGLQIVGPPHADVDVLQLAHAFEQATMFYRQKPQ 329          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|1099515246|emb|SFD73844.1| (amidase [Roseovarius indicus])

HSP 1 Score: 86.2705 bits (212), Expect = 6.193e-17
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    2 LPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREP 89
            +PP+  E R+PTH+  T L +YIDW+ L+ V+TL+  P++S+PCG TR G PVGLQ+IG P  +  +L+ A L ET       +P  P
Sbjct:  403 VPPYPVEQRFPTHIGDTELTTYIDWMFLTFVITLTGCPAISVPCGTTRSGLPVGLQLIGKPKGDFDLLSAAQLLETEMGLADQMPIRP 490          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|951445191|ref|WP_057817654.1| (amidase [Roseovarius indicus] >gi|950101113|gb|KRS16904.1| amidase [Roseovarius indicus])

HSP 1 Score: 85.8853 bits (211), Expect = 7.180e-17
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    2 LPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREP 89
            +PP+  E R+PTH+  T L +YIDW+ L+ V+TL+  P++S+PCG TR G PVGLQ+IG P  +  +L+ A L ET       +P  P
Sbjct:  376 VPPYPVEQRFPTHIGDTELTTYIDWMFLTFVITLTGCPAISVPCGTTRSGLPVGLQLIGKPKGDFDLLSAAQLLETEMGLADQMPIRP 463          
BLAST of EWM20721.1 vs. NCBI_GenBank
Match: gi|1032637211|ref|WP_064259547.1| (amidase [Roseovarius indicus] >gi|1032134107|gb|OAO06128.1| amidase [Roseovarius indicus])

HSP 1 Score: 85.8853 bits (211), Expect = 8.484e-17
Identity = 40/88 (45.45%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    2 LPPFHAELRYPTHVAATPLPSYIDWLRLSSVVTLSCGPSLSLPCGLTRDGRPVGLQMIGPPYSEARMLALAALYETAHPFHSLVPREP 89
            +PP+  E R+PTH+  T L +YIDW+ L+ V+TL+  P++S+PCG TR G PVGLQ+IG P  +  +L+ A L ET       +P  P
Sbjct:  376 VPPYPVEQRFPTHIGDTELTTYIDWMFLTFVITLTGCPAISVPCGTTRTGLPVGLQLIGKPKGDFDLLSAAQLLETEMGLADQMPIRP 463          
The following BLAST results are available for this feature:
BLAST of EWM20721.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100569|gb|EWM20721.1|1.495e-101100.00amidotransferase [Nannochloropsis gaditana][more]
gi|553194224|ref|XP_005855912.1|1.995e-27100.00amidase, partial [Nannochloropsis gaditana CCMP526... [more]
gi|1177839457|ref|WP_082865991.1|1.553e-1945.45hypothetical protein [Sulfitobacter sp. HI0129][more]
gi|1056480690|ref|WP_067920678.1|1.821e-1745.45MULTISPECIES: amidase [Sulfitobacter] >gi|10244741... [more]
gi|1113124928|gb|OJU00491.1|2.589e-1748.86amidase [Rhizobiales bacterium 65-79][more]
gi|873237526|emb|CEL97677.1|4.437e-1745.68unnamed protein product [Vitrella brassicaformis C... [more]
gi|575408062|gb|ETW94698.1|5.462e-1744.19hypothetical protein ETSY2_49355, partial [Candida... [more]
gi|1099515246|emb|SFD73844.1|6.193e-1745.45amidase [Roseovarius indicus][more]
gi|951445191|ref|WP_057817654.1|7.180e-1745.45amidase [Roseovarius indicus] >gi|950101113|gb|KRS... [more]
gi|1032637211|ref|WP_064259547.1|8.484e-1745.45amidase [Roseovarius indicus] >gi|1032134107|gb|OA... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9981rna9981Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications