EWM20727.1, cds9946 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20727.1 vs. NCBI_GenBank
Match: gi|585100580|gb|EWM20727.1| (hypothetical protein Naga_102498g1 [Nannochloropsis gaditana]) HSP 1 Score: 317.39 bits (812), Expect = 1.328e-109 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 Query: 1 MLASYTPYQEQQRQGYPLIPRCTATALAARLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRFVCNESLLSLYAALVTLMLGYGSKTQIDVVLKVGGRRRGGRERGTGGGREGRGGRRGEGEEAGYMRAKRAI 156 MLASYTPYQEQQRQGYPLIPRCTATALAARLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRFVCNESLLSLYAALVTLMLGYGSKTQIDVVLKVGGRRRGGRERGTGGGREGRGGRRGEGEEAGYMRAKRAI Sbjct: 1 MLASYTPYQEQQRQGYPLIPRCTATALAARLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRFVCNESLLSLYAALVTLMLGYGSKTQIDVVLKVGGRRRGGRERGTGGGREGRGGRRGEGEEAGYMRAKRAI 156
BLAST of EWM20727.1 vs. NCBI_GenBank
Match: gi|553178413|ref|XP_005852550.1| (hypothetical protein NGA_0687300 [Nannochloropsis gaditana CCMP526] >gi|422295983|gb|EKU23282.1| hypothetical protein NGA_0687300 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 66.6254 bits (161), Expect = 7.440e-10 Identity = 46/111 (41.44%), Postives = 59/111 (53.15%), Query Frame = 0 Query: 26 ALAARLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRF---VCNESLLSLYAALVTLMLGYGSKTQIDVVLKVGGRR-RGGRERGTGG 132 L RL +D TAC +V RG H V CN RM++LF+ EI+GL+ QTG AFW F V E+LL+ A LV G ++ ID ++ V R R GR T G Sbjct: 394 PLFLRLARDTTACLMVFRGN-DHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQG-RSSIDRIVGVTTRDGRWGRAMATLG 502
BLAST of EWM20727.1 vs. NCBI_GenBank
Match: gi|585103505|gb|EWM22860.1| (hypothetical protein Naga_100988g2 [Nannochloropsis gaditana]) HSP 1 Score: 65.0846 bits (157), Expect = 1.887e-9 Identity = 45/110 (40.91%), Postives = 58/110 (52.73%), Query Frame = 0 Query: 27 LAARLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRF---VCNESLLSLYAALVTLMLGYGSKTQIDVVLKVGGRR-RGGRERGTGG 132 L RL +D TAC +V RG H V CN RM++LF+ EI+GL+ QTG AFW F V E+LL+ A LV G ++ D ++ V R R GR T G Sbjct: 373 LFLRLARDTTACLMVFRGN-DHVSDVTCNARMSSLFMSTEEIRGLIGQTGFACCAFWSHFLDPVDVEALLAGSADLVLDKFNQG-RSSFDRIVGVTTRDGRKGRAMATLG 480
BLAST of EWM20727.1 vs. NCBI_GenBank
Match: gi|585109633|gb|EWM27402.1| (hypothetical protein Naga_100212g6 [Nannochloropsis gaditana]) HSP 1 Score: 63.1586 bits (152), Expect = 8.623e-9 Identity = 31/95 (32.63%), Postives = 49/95 (51.58%), Query Frame = 0 Query: 23 TATALAARLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRFVCNESLLSLYAALVTLMLGYGSKTQIDVVLK 117 + + L +L DE ACY+V+ V CN RM+ LF+ + E++GL QT + +FW RF+ L L A +M+ +DV+L+ Sbjct: 394 SISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILE 488
BLAST of EWM20727.1 vs. NCBI_GenBank
Match: gi|553186625|ref|XP_005854455.1| (hypothetical protein NGA_0244301 [Nannochloropsis gaditana CCMP526] >gi|553187875|ref|XP_005854696.1| hypothetical protein NGA_0244302 [Nannochloropsis gaditana CCMP526] >gi|422294361|gb|EKU21661.1| hypothetical protein NGA_0244302 [Nannochloropsis gaditana CCMP526] >gi|422294601|gb|EKU21901.1| hypothetical protein NGA_0244301 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 63.1586 bits (152), Expect = 8.623e-9 Identity = 31/95 (32.63%), Postives = 49/95 (51.58%), Query Frame = 0 Query: 23 TATALAARLTKDETACYLVSRGGFGHHHVVECNQRMATLFLPNPEIQGLVHQTGLGSSAFWGRFVCNESLLSLYAALVTLMLGYGSKTQIDVVLK 117 + + L +L DE ACY+V+ V CN RM+ LF+ + E++GL QT + +FW RF+ L L A +M+ +DV+L+ Sbjct: 394 SISQLIQQLAADENACYVVASVNATGIESVWCNDRMSELFISSEELEGLKSQTRMAIYSFWPRFLSGPGLYELMGAFSAIMVQSTHTPSLDVILE 488 The following BLAST results are available for this feature:
BLAST of EWM20727.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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