EWM20728.1, cds9945 (CDS) Nannochloropsis gaditana

Overview
NameEWM20728.1
Unique Namecds9945
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:36949..37004 +
Alignment locationKK037259.1:37103..37199 +
Alignment locationKK037259.1:37283..37373 +
Alignment locationKK037259.1:37598..37874 +
Alignment locationKK037259.1:38128..38263 +

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Properties
Property NameValue
Protein idEWM20728.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100976g1.1.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:36949..37004 +
KK037259.1supercontigKK037259.1:37103..37199 +
KK037259.1supercontigKK037259.1:37283..37373 +
KK037259.1supercontigKK037259.1:37598..37874 +
KK037259.1supercontigKK037259.1:38128..38263 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20728.1 vs. NCBI_GenBank
Match: gi|585100582|gb|EWM20728.1| (hypothetical protein Naga_100976g1 [Nannochloropsis gaditana])

HSP 1 Score: 444.121 bits (1141), Expect = 7.987e-158
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 
Query:    1 MPDTDETLAVVAGLLLRVREDKNIGTSTYGKANTTPEAHNECVEKVVARQDCLPTTDASGRTSDVHHAPRAQQSAGAESSRAPSKQPPPRATDSTTTTLAPLGKKKRGRPKASRMLREERGLPRKRRLGPTVGSGKEGGGSTTGDKGEQKDPSGKALEERVVARFNDPAGASFWHSRPHHLIDQDSAIICTARMDMVAAAVSLVKSQRLDPVKAHDFL 218
            MPDTDETLAVVAGLLLRVREDKNIGTSTYGKANTTPEAHNECVEKVVARQDCLPTTDASGRTSDVHHAPRAQQSAGAESSRAPSKQPPPRATDSTTTTLAPLGKKKRGRPKASRMLREERGLPRKRRLGPTVGSGKEGGGSTTGDKGEQKDPSGKALEERVVARFNDPAGASFWHSRPHHLIDQDSAIICTARMDMVAAAVSLVKSQRLDPVKAHDFL
Sbjct:    1 MPDTDETLAVVAGLLLRVREDKNIGTSTYGKANTTPEAHNECVEKVVARQDCLPTTDASGRTSDVHHAPRAQQSAGAESSRAPSKQPPPRATDSTTTTLAPLGKKKRGRPKASRMLREERGLPRKRRLGPTVGSGKEGGGSTTGDKGEQKDPSGKALEERVVARFNDPAGASFWHSRPHHLIDQDSAIICTARMDMVAAAVSLVKSQRLDPVKAHDFL 218
The following BLAST results are available for this feature:
BLAST of EWM20728.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100582|gb|EWM20728.1|7.987e-158100.00hypothetical protein Naga_100976g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9976rna9976Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications