EWM20730.1, cds9943 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|585100588|gb|EWM20730.1| (atp-dependent rna helicase a [Nannochloropsis gaditana]) HSP 1 Score: 2368.19 bits (6136), Expect = 0.000e+0 Identity = 1168/1168 (100.00%), Postives = 1168/1168 (100.00%), Query Frame = 0 Query: 1 MKRADADMDDLLPSFPVHASGQGEDWEEEEEEEGEAGGGEEGGKEGQLLLPRMDRLPEASKALGNVRLPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQADPLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSDLLPPHKLASLEILPFHSLISVEETDKVFEPSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSPHDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGLASDPLTTLVVFSAFLRMVQDTSSSLAASSVGPTTVRGKRELKKRQRDWCTERGLVSRTLDRLHMVVKDLSRKLSLHSDGSLPTFEEVHKTLVRPTYVQELLRDQEKIFLLRSLLLGSFHANLLRGTMSARGNSEEDDRKLVIRRPPAEIIRCTSLGDILGMEEDMSKIQSTKNGRDLEVLFLPADLRAGRRDTEASSALPSSTMPSPDAVSASPLAPFPPFGPGQHGFRDVHFAVKALLNSKTGLSLKVENPTLGAAKHEEEDGDEEEEEEEEEGARGGKKKRRGTLGSQTKEKGNARLLELDVIGKYAMQWKCLKMDVRVGFPKASILRNAAVSCTALSKLPSSSSPAPGPSVLYAVTPQISKFLSREQIPFYSAPRATLLPFPESLLAVLIAVFSRNEVISFRHLRSDAEEVIAEMLEGEAEEGEEVRKEGGNGGGRRGGQGGLRNGSYRESGGTSRELASRRREGGSGSPTLASSPSTCYESSTTSVAPYPRLLRGKDG 1168 MKRADADMDDLLPSFPVHASGQGEDWEEEEEEEGEAGGGEEGGKEGQLLLPRMDRLPEASKALGNVRLPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQADPLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSDLLPPHKLASLEILPFHSLISVEETDKVFEPSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSPHDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGLASDPLTTLVVFSAFLRMVQDTSSSLAASSVGPTTVRGKRELKKRQRDWCTERGLVSRTLDRLHMVVKDLSRKLSLHSDGSLPTFEEVHKTLVRPTYVQELLRDQEKIFLLRSLLLGSFHANLLRGTMSARGNSEEDDRKLVIRRPPAEIIRCTSLGDILGMEEDMSKIQSTKNGRDLEVLFLPADLRAGRRDTEASSALPSSTMPSPDAVSASPLAPFPPFGPGQHGFRDVHFAVKALLNSKTGLSLKVENPTLGAAKHEEEDGDEEEEEEEEEGARGGKKKRRGTLGSQTKEKGNARLLELDVIGKYAMQWKCLKMDVRVGFPKASILRNAAVSCTALSKLPSSSSPAPGPSVLYAVTPQISKFLSREQIPFYSAPRATLLPFPESLLAVLIAVFSRNEVISFRHLRSDAEEVIAEMLEGEAEEGEEVRKEGGNGGGRRGGQGGLRNGSYRESGGTSRELASRRREGGSGSPTLASSPSTCYESSTTSVAPYPRLLRGKDG Sbjct: 1 MKRADADMDDLLPSFPVHASGQGEDWEEEEEEEGEAGGGEEGGKEGQLLLPRMDRLPEASKALGNVRLPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQADPLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSDLLPPHKLASLEILPFHSLISVEETDKVFEPSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSPHDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGLASDPLTTLVVFSAFLRMVQDTSSSLAASSVGPTTVRGKRELKKRQRDWCTERGLVSRTLDRLHMVVKDLSRKLSLHSDGSLPTFEEVHKTLVRPTYVQELLRDQEKIFLLRSLLLGSFHANLLRGTMSARGNSEEDDRKLVIRRPPAEIIRCTSLGDILGMEEDMSKIQSTKNGRDLEVLFLPADLRAGRRDTEASSALPSSTMPSPDAVSASPLAPFPPFGPGQHGFRDVHFAVKALLNSKTGLSLKVENPTLGAAKHEEEDGDEEEEEEEEEGARGGKKKRRGTLGSQTKEKGNARLLELDVIGKYAMQWKCLKMDVRVGFPKASILRNAAVSCTALSKLPSSSSPAPGPSVLYAVTPQISKFLSREQIPFYSAPRATLLPFPESLLAVLIAVFSRNEVISFRHLRSDAEEVIAEMLEGEAEEGEEVRKEGGNGGGRRGGQGGLRNGSYRESGGTSRELASRRREGGSGSPTLASSPSTCYESSTTSVAPYPRLLRGKDG 1168
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|553194206|ref|XP_005855906.1| (deah (asp-glu-ala-his) box polypeptide 9, partial [Nannochloropsis gaditana CCMP526] >gi|422293150|gb|EKU20450.1| deah (asp-glu-ala-his) box polypeptide 9, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1145.95 bits (2963), Expect = 0.000e+0 Identity = 624/731 (85.36%), Postives = 624/731 (85.36%), Query Frame = 0 Query: 137 EDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSV----------------------------------------------------TEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSDLLPPHKLASLEILPFHSLISVEETDKVFEPSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSPHDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGLASDPLTTLVVFSAFLRMVQDTSSSLAASSVGPTTVRGKRELKKRQRDWCTERGLVSRTLDRLHMVVKDLSRKLSLHSDGSLPTFEEVHKTLVRPTYVQELLRDQEKIFLLRSLLLGSFHANLLRGTMSARGNSEEDDRKLVIRRPPAEI 815 EDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSV TEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSDLLPPHKLASLEILPFHSLISVEETDKVFEPSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSPHDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGL VRGKRELKKRQRDWCTERGLVSRTLDRLHM EVHKTLVRPTYVQELLRDQEKIFLLRSLLLGSFHANLLRGTMSARGNSEEDDRKLVIRRPPAEI Sbjct: 1 EDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVGRREGGREGRREGGSEGALAQPTSPRRSWSDTRPPRHFLPSLLLLFLPPLKVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSDLLPPHKLASLEILPFHSLISVEETDKVFEPSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSPHDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGL----------------------------------VRGKRELKKRQRDWCTERGLVSRTLDRLHM---------------------EVHKTLVRPTYVQELLRDQEKIFLLRSLLLGSFHANLLRGTMSARGNSEEDDRKLVIRRPPAEI 676
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|403351331|gb|EJY75155.1| (Nucleic acid helicase (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 264.618 bits (675), Expect = 1.187e-68 Identity = 206/738 (27.91%), Postives = 347/738 (47.02%), Query Frame = 0 Query: 68 LPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQADPL----ARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHS-QGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGG----KEEDDDEEKDEEVPTLHVGAKSP-------------------FSVTEVYLEDLRGFCAFLEADLALSCFVDS--MVKRGESMAGSKPALEEKMMTIAVKLLSSLVAP----------GQVALVFVAGMADIEDLHTHFSDLLPPHKLAS-LEILPFHSLISVEETDKVFEPSPT---RSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSP-HDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGALEA--------NDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGLASDPLTTLVVFSAFLRMVQ------DTSSSLAASSVGPTT-VRGKRELK-----KRQRDWCTERGLVSRTLDRLHMVVKDLSRKLS 740 LPI K+ I+ + + V++I G+TGCGK+TQVPK+I++ ++ T P R AA N+AK VA++LGE VG VGY++G + +I F+T G LQ+LV++ +H+++DEVHER ++ D +++ L+ + KLILMSAT +F +YF S SS ++ H+ G+ + +E + + K+E+W G K++ D +++D+ + + K+ F V E YL+ + ++ D+ D +++ + G+KP ++E M +A ++ ++ + LVF+ G+ +I + ++ + S LE++P HS + EE ++ F+ S + K+II+TNIAE+S+TI D+K+V+DF + K L YD + L SWVS+AS+ QR GR GRV DG V RL FF + P + +PE+ PL+ +ILQ+K+ + + L R I PPE + A L + GAL + S TALG + L DL I R+ + G L +AI++ C+ Q F + + + M ++Q Y SD + L VF ++ Q +AA + P + R ++ +R WC +R L L + +V+++ ++ Sbjct: 81 LPIAKHKKRIISKLEQNRVLVISGDTGCGKTTQVPKYILEQAEFNKKECKIICTQPRRLAAVNIAKRVAQELGERVGFKVGYQVGMQSRKTQGVTKITFMTTGIFLQRLVNNPDSIKRCTHIIMDEVHERDLDIDFSLVVIKHLLNKEAEGFNF--KLILMSATFNIELFTNYF-----------SKSSIKSIEHMAV-----YVGVEEQMRRQEEEKRLKLEKQWGPCKQEDWGNSGGAKNKQDADMQDEDQWIESSDAVMKNSMPIAKQNDPADIIEINARLFEVKEFYLDQVVK--NIMQDDMIEKTPQDKDLLLESLQISEGNKPQIKECSMRVASVIICDVIEKHNRFQDEEGDKKSILVFLPGLFEIFEFMDFINENYDQQWIRSNLELIPLHSSLCEEEQERAFKSSQKMDGKRKVIISTNIAESSITIPDIKYVIDFMLTKELFYDPMTKSESLILSWVSKASSKQRAGRAGRVADGIVFRLCLEKFFKNAIPEYPKPEMQRCPLEKLILQIKLWNRYEAEEVLGRAIQPPEFRDICNAIKNLQQTGALTIPPPFAKTDEERRSKITALGKIFVNLPCDLKITRIYLFGMALKCMQQAIIIG---CIHQQ----SRSIFRNNRVSDYVNMTKLQC---IYDQNRDSDSIMLLRVFQEWVFKFQPHLKHKQNQPQVAAGQILPQRPIYDHRRIRFARPSHAERQWCRDRNLDLTILKEVATMVEEIRQRFQ 788
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|403337766|gb|EJY68105.1| (Nucleic acid helicase (macronuclear) [Oxytricha trifallax] >gi|403361863|gb|EJY80645.1| Nucleic acid helicase (macronuclear) [Oxytricha trifallax]) HSP 1 Score: 264.233 bits (674), Expect = 1.438e-68 Identity = 206/738 (27.91%), Postives = 347/738 (47.02%), Query Frame = 0 Query: 68 LPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQADPL----ARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHS-QGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGG----KEEDDDEEKDEEVPTLHVGAKSP-------------------FSVTEVYLEDLRGFCAFLEADLALSCFVDS--MVKRGESMAGSKPALEEKMMTIAVKLLSSLVAP----------GQVALVFVAGMADIEDLHTHFSDLLPPHKLAS-LEILPFHSLISVEETDKVFEPSPT---RSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSP-HDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGALEA--------NDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGLASDPLTTLVVFSAFLRMVQ------DTSSSLAASSVGPTT-VRGKRELK-----KRQRDWCTERGLVSRTLDRLHMVVKDLSRKLS 740 LPI K+ I+ + + V++I G+TGCGK+TQVPK+I++ ++ T P R AA N+AK VA++LGE VG VGY++G + +I F+T G LQ+LV++ +H+++DEVHER ++ D +++ L+ + KLILMSAT +F +YF S SS ++ H+ G+ + +E + + K+E+W G K++ D +++D+ + + K+ F V E YL+ + ++ D+ D +++ + G+KP ++E M +A ++ ++ + LVF+ G+ +I + ++ + S LE++P HS + EE ++ F+ S + K+II+TNIAE+S+TI D+K+V+DF + K L YD + L SWVS+AS+ QR GR GRV DG V RL FF + P + +PE+ PL+ +ILQ+K+ + + L R I PPE + A L + GAL + S TALG + L DL I R+ + G L +AI++ C+ Q F + + + M ++Q Y SD + L VF ++ Q +AA + P + R ++ +R WC +R L L + +V+++ ++ Sbjct: 81 LPIAKHKKRIISKLEQNRVLVISGDTGCGKTTQVPKYILEQAEFNKKECKIICTQPRRLAAVNIAKRVAQELGERVGFKVGYQVGMQSRKTQGVTKITFMTTGIFLQRLVNNPDSIKRCTHIIMDEVHERDLDIDFSLVVIKHLLNKEAEGFNF--KLILMSATFNIELFTNYF-----------SKSSIKSIEHMAV-----YVGVEEQMRRQEEEKRLKLEKQWGPCKQEDWGNSGGAKNKQDADMQDEDQWIESSDAVMKNSMPIAKQNDPADIIEINARLFEVKEFYLDQVVK--NIMQDDMIEKTPQDKDLLLESLQISEGNKPQIKECSMRVASVIICDVIEKHNRFQDEEGDKKSILVFLPGLFEIFEFMDFINENYDQQWIRSNLELIPLHSSLCEEEQERAFKSSQKMDGKRKVIISTNIAESSITIPDIKYVIDFMLTKELFYDPMTKSESLILSWVSKASSKQRAGRAGRVADGIVFRLCLEKFFKNAIPEYPKPEMQRCPLEKLILQIKLWNRYEAEEVLGRAIQPPEFRDICNAIKNLQQTGALTIPPPFAKTDEERRSKITALGKIFVNLPCDLKITRIYLFGMALKCMQQAIIIG---CIHQQ----SRSIFRNNRVSDYVNMTKLQC---IYDQNRDSDSIMLLRVFQEWVFKFQPHLKHKQNQPQVAAGQILPQRPIYDHRRIRFARPSHAERQWCRDRNLDLTILKEVATMVEEIRQRFQ 788
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|939683679|ref|XP_008556380.2| (PREDICTED: probable ATP-dependent RNA helicase spindle-E [Microplitis demolitor]) HSP 1 Score: 259.996 bits (663), Expect = 3.240e-67 Identity = 208/750 (27.73%), Postives = 353/750 (47.07%), Query Frame = 0 Query: 67 RLPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFII-----QADPLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSDLLPPHKLASLEILPFHSLISVEETDKVFE-PSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFASLSPHDEPEILTKPLDAVILQMKIMEFPDPIQALMRCITPPEVEQVTAATGYLFEIGAL---EANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCLPQDVFRLPHPTFSKSIPAFFHEMGRVQFYKEAYSYGLASDPLTTLVVFSAFLRMVQDTSSSLAASSVGPTTVRGKRELKKRQRDWCTERGLVSRTLDRLHMVVKDLSRKLSLHSDGSLPTFEEVHKTLVRPTYVQELLRDQEKIFLLRSLLLGSFHANLLRGTMSARGNSEEDDRKLV 807 + I ++E+IV IA PV II+G TGCGK+TQVP+FI+ + P + +T P R AA ++AK V+ + +G VGY++G + D R+ + T G LLQ+L+ ++ ++H+++DE+HER + D L ++R L S K+ILMSAT F++YF + +G++ P++ T V ++ +++ +E + DD +P EV L + + +E L +D + K ES + S + PG LVF+ G+ +IE++H + P + +I+ HS I+ EE KVF P ++I++TNIAE+S+T++D+K+V+DF + K L D + L +W S+++ QR GRTGRV DG V RL + F+ L PEI+ PL+ V+L+ KI++ P L + PP++ + L E G L E ++ T LG ++ +L +D+ I +M++LG + V EAI++ AS+ + +++F P KS A + Y+Y SD + L F+ ++R + TS G+ + + ++ W L R L + +VKD++++L G TF L+ DQE+ F+L+ ++ G F+ + ++ N E + KL+ Sbjct: 117 NMTIKTKQEKIVTTIAAEPVTIIQGPTGCGKTTQVPQFIMDYCFKRKQP-CNIIVTQPRRIAALSIAKRVSEERDWPLGSIVGYKVGLSSNVSAD-TRLTYCTTGVLLQRLITTKTLTDFTHIIVDEIHERDQDMDFLLLVIRKLLYLNSHKV----KIILMSATFDVHKFENYF-SSYVGNTLTPAT-------------------------------TIDVAKSNYFQIKEYYL-------DDLLSLRPIP-------------EVKLSEPKVTQEMMEFACRLMGIMDEIDKNSESTSAS----------------TDFHRPG--ILVFLPGIHEIEEMHNYMES--PKLQKCKWDIVVLHSSITNEEQQKVFTLPPKDYRRVILSTNIAESSITVSDIKYVIDFCLTKQLTTDPHTNYQCLELTWASKSNCKQRAGRTGRVMDGRVYRLVPKQFYDKLPAECSPEIVRAPLEQVVLRSKIIDLGSPKALLALALDPPDLSNLARTVLLLKEAGGLVGYEDDNLDGELTDLGRIMASLPMDIHIGKMIVLGHLFSVLREAIIIGASMAV-KNMFSSPFQLKLKSYDA--------KLMWSQYTY---SDAIAFLNAFNVWMR--EKTS--------------GRIKTDRDEKAWARTNCLQVRVLREVDAMVKDITQRLG--KMGIKETFGAKKVNLI----------DQERYFVLKLVIAGGFYPHYF---VTHSQNDESNAMKLL 745
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|1190457659|ref|XP_020832635.1| (putative ATP-dependent RNA helicase DHX57 isoform X2 [Phascolarctos cinereus]) HSP 1 Score: 234.958 bits (598), Expect = 2.285e-59 Identity = 188/581 (32.36%), Postives = 292/581 (50.26%), Query Frame = 0 Query: 68 LPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQ------ADPLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDAL--SHLVSCERTGNGGIPGRESTKEGTGTSGV--GRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALE--EKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSD--LLPPHKLASLEILPFHSLISVEETDKVFEPSPT-RSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFA-SLSPHDEPEILTKPLDAVILQMKIME-FPD-PIQALM-RCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCL 629 LP + +E I+ ++ H V+++ G TGCGK+TQ+P+FI+ + +A + T P R +A ++A+ VA++ E +G TVGY+I + S R+L+ TAG LL++L +H+++DEVHER+ ESD L +L+D + S +++LMSATL + +F +YF+ + + P + + + G P STK + R F E EE+ R D+ KD VP + F + F S++K M K LE E ++ V + S PG V LVF+ G+A+I+ L+ L + ILP HS +S EE VF P +KIII+TNIAE S+TI+DV +V+D G K RYD + L ++VS+A+A QR+GR GRV G L+T + L PEI PL+ + L++KI+E F D +Q++ + I PP +E + A+ L ++GAL A++ +P LG L +L VD+ I ++M+ G + A+ +AASL Sbjct: 532 LPAWEERETILDLLSKHQVLVVSGMTGCGKTTQIPQFILDDTLHGPPEKVANIICTQPRRISAISVAERVAKERAEKMGLTVGYQIRLE-SVKSSATRLLYCTAGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDVMLQNSDL-----RVVLMSATLNAELFSEYFNSCPVINIPGRTFPVDQFFLEDAIAMTKYVIEDGSPYMRSTKLSSEERKARRNRTAFEEVEEDLRRSLHFLDESSVKDS-VPDQQLN--------------------FKQLAARYPGFSKSVIKTMSVMDLEKVNLELIEALLEWIVDGMHSY-PPGAV-LVFLPGLAEIKMLYEQLQSNPLFNNRRSNRCIILPLHSSLSSEEQQVVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFTSYHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFTDHSLQSVFSQLIEPPRIESLRASKVRLQDLGALTADEKLTP---LGYHLASLPVDVRIGKLMLFGAIFRCLDPALTIAASLAF 1080
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|1190457655|ref|XP_020832633.1| (putative ATP-dependent RNA helicase DHX57 isoform X1 [Phascolarctos cinereus] >gi|1190457657|ref|XP_020832634.1| putative ATP-dependent RNA helicase DHX57 isoform X1 [Phascolarctos cinereus]) HSP 1 Score: 234.958 bits (598), Expect = 2.902e-59 Identity = 188/579 (32.47%), Postives = 292/579 (50.43%), Query Frame = 0 Query: 68 LPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQ------ADPLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDAL--SHLVSCERTGNGGIPGRESTKEGTGTSGV--GRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALE--EKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSD--LLPPHKLASLEILPFHSLISVEETDKVFEPSPT-RSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFA-SLSPHDEPEILTKPLDAVILQMKIME-FPD-PIQALM-RCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASL 627 LP + +E I+ ++ H V+++ G TGCGK+TQ+P+FI+ + +A + T P R +A ++A+ VA++ E +G TVGY+I + S R+L+ TAG LL++L +H+++DEVHER+ ESD L +L+D + S +++LMSATL + +F +YF+ + + P + + + G P STK + R F E EE+ R D+ KD VP + F + F S++K M K LE E ++ V + S PG V LVF+ G+A+I+ L+ L + ILP HS +S EE VF P +KIII+TNIAE S+TI+DV +V+D G K RYD + L ++VS+A+A QR+GR GRV G L+T + L PEI PL+ + L++KI+E F D +Q++ + I PP +E + A+ L ++GAL A++ +P LG L +L VD+ I ++M+ G + A+ +AASL Sbjct: 532 LPAWEERETILDLLSKHQVLVVSGMTGCGKTTQIPQFILDDTLHGPPEKVANIICTQPRRISAISVAERVAKERAEKMGLTVGYQIRLE-SVKSSATRLLYCTAGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDVMLQNSDL-----RVVLMSATLNAELFSEYFNSCPVINIPGRTFPVDQFFLEDAIAMTKYVIEDGSPYMRSTKLSSEERKARRNRTAFEEVEEDLRRSLHFLDESSVKDS-VPDQQLN--------------------FKQLAARYPGFSKSVIKTMSVMDLEKVNLELIEALLEWIVDGMHSY-PPGAV-LVFLPGLAEIKMLYEQLQSNPLFNNRRSNRCIILPLHSSLSSEEQQVVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFTSYHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFTDHSLQSVFSQLIEPPRIESLRASKVRLQDLGALTADEKLTP---LGYHLASLPVDVRIGKLMLFGAIFRCLDPALTIAASL 1078
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|1190457661|ref|XP_020832636.1| (putative ATP-dependent RNA helicase DHX57 isoform X3 [Phascolarctos cinereus]) HSP 1 Score: 234.572 bits (597), Expect = 3.133e-59 Identity = 188/579 (32.47%), Postives = 292/579 (50.43%), Query Frame = 0 Query: 68 LPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQ------ADPLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFHPALLGSSPPPSSSSSDAL--SHLVSCERTGNGGIPGRESTKEGTGTSGV--GRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALE--EKMMTIAVKLLSSLVAPGQVALVFVAGMADIEDLHTHFSD--LLPPHKLASLEILPFHSLISVEETDKVFEPSPT-RSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFA-SLSPHDEPEILTKPLDAVILQMKIME-FPD-PIQALM-RCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASL 627 LP + +E I+ ++ H V+++ G TGCGK+TQ+P+FI+ + +A + T P R +A ++A+ VA++ E +G TVGY+I + S R+L+ TAG LL++L +H+++DEVHER+ ESD L +L+D + S +++LMSATL + +F +YF+ + + P + + + G P STK + R F E EE+ R D+ KD VP + F + F S++K M K LE E ++ V + S PG V LVF+ G+A+I+ L+ L + ILP HS +S EE VF P +KIII+TNIAE S+TI+DV +V+D G K RYD + L ++VS+A+A QR+GR GRV G L+T + L PEI PL+ + L++KI+E F D +Q++ + I PP +E + A+ L ++GAL A++ +P LG L +L VD+ I ++M+ G + A+ +AASL Sbjct: 493 LPAWEERETILDLLSKHQVLVVSGMTGCGKTTQIPQFILDDTLHGPPEKVANIICTQPRRISAISVAERVAKERAEKMGLTVGYQIRLE-SVKSSATRLLYCTAGVLLRRLEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDVMLQNSDL-----RVVLMSATLNAELFSEYFNSCPVINIPGRTFPVDQFFLEDAIAMTKYVIEDGSPYMRSTKLSSEERKARRNRTAFEEVEEDLRRSLHFLDESSVKDS-VPDQQLN--------------------FKQLAARYPGFSKSVIKTMSVMDLEKVNLELIEALLEWIVDGMHSY-PPGAV-LVFLPGLAEIKMLYEQLQSNPLFNNRRSNRCIILPLHSSLSSEEQQVVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAGRVASGVCFHLFTSYHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFTDHSLQSVFSQLIEPPRIESLRASKVRLQDLGALTADEKLTP---LGYHLASLPVDVRIGKLMLFGAIFRCLDPALTIAASL 1039
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|488518718|ref|XP_004451308.1| (PREDICTED: putative ATP-dependent RNA helicase DHX57 [Dasypus novemcinctus] >gi|488518720|ref|XP_004451309.1| PREDICTED: putative ATP-dependent RNA helicase DHX57 [Dasypus novemcinctus]) HSP 1 Score: 233.032 bits (593), Expect = 1.121e-58 Identity = 186/586 (31.74%), Postives = 296/586 (50.51%), Query Frame = 0 Query: 68 LPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQ------ADPLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFH--PALL---GSSPPPSSSSSDALSHLVSCERTGNGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDDDEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLV------APGQVALVFVAGMADIEDLHTHF--SDLLPPHKLASLEILPFHSLISVEETDKVF-EPSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYTRAFFA-SLSPHDEPEILTKPLDAVILQMKIMEFPDP--IQALM-RCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCL 629 LP + +E I++ ++ H V++I G TGCGK+TQ+P+FI+ + +A + T P R +A ++A+ VA++ E VG TVGY+I + S R+L+ T G LL++L +H+++DEVHER+ ESD L +L+D + + ++ILMSATL + +F +YF+ P + + P DA++ + G+ + + + + R F E EE+ R +D D KD +P + K L +GF S++K M K LE + LL +V PG + LVF+ G+A+I+ L+ + L + I P HS +S EE VF +P +KIII+TNIAE S+TI+DV +V+D G K RYD + L ++VSQA+A QR+GR GRV G L+T ++ L PE+ PL+ + L++KI+E + +Q++ R I PP E + A+ L ++GAL ++ +P LG L +L VD+ I ++M+ G + A+ +AASL Sbjct: 541 LPAWEERETILKLLSKHQVLVISGMTGCGKTTQIPQFILDDSLNGPPEKVANIICTQPRRISAISVAERVAKERAERVGLTVGYQIRLE-SVKSSATRLLYCTTGVLLRRLEGDSALQGITHIIVDEVHERTEESDFLLLVLKDIVLQ-----RPTLQVILMSATLNAELFSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLSLHFQDQDSVKD-SIPDQQLDFKQ-------LLSRYKGFS-------------KSVIKTMSIMDFEKVNLE-----LIEALLEWIVDGKHTYPPGAI-LVFLPGLAEIKMLYEQLQSNSLFNNRRSKRCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYSHQLLKQQLPEMQRVPLEQLCLRIKILEMFNTHNLQSVFSRLIEPPHSESLRASKIRLRDLGALTQDEKLTP---LGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLAF 1090
BLAST of EWM20730.1 vs. NCBI_GenBank
Match: gi|1188075928|ref|XP_020785598.1| (putative ATP-dependent RNA helicase DHX57 [Boleophthalmus pectinirostris]) HSP 1 Score: 233.032 bits (593), Expect = 1.336e-58 Identity = 189/587 (32.20%), Postives = 293/587 (49.91%), Query Frame = 0 Query: 68 LPILDRKEEIVRAIATHPVVIIEGETGCGKSTQVPKFIIQAD------PLARLAITTPTRKAATNLAKEVARQLGEDVGRTVGYRIGNDRSADKDRARILFVTAGWLLQKLVHSQGRALYSHVLLDEVHERSIESDLLCFILRDRLSAASSSGQAAPKLILMSATLQSSIFQDYFH--PALLGSSPPPSSSSSDALSHLVSCERTG---NGGIPGRESTKEGTGTSGVGRAGFYEKEEEWREGGKEEDD-DEEKDEEVPTLHVGAKSPFSVTEVYLEDLRGFCAFLEADLALSCFVDSMVKRGESMAGSKPALEEKMMTIAVKLLSSLV------APGQVALVFVAGMADIEDLHTHFSD--LLPPHKLASLEILPFHSLISVEETDKVF-EPSPTRSKIIIATNIAEASLTINDVKFVVDFGVAKALRYDILEHRTVLGYSWVSQASANQRRGRTGRVCDGFVIRLYT-RAFFASLSPHDEPEILTKPLDAVILQMKIME-FPDPI--QALMRCITPPEVEQVTAATGYLFEIGALEANDATSPTTALGPLLNTLGVDLPIARMMILGCVLGVGLEAIVMAASLCL 629 LP K+ I+ + V+++ G TGCGK+TQ+P+FI+ A +A + T P R +A ++A+ VA++ E +G++VGY+I + S R+L+ T G LL++L +HV++DEVHER+ ESD L +L+D + + K+ILMSATL +++F +YF+ P + P + D + E+TG G P S K+ + G GR GGK+ D E+ E+V K F + + L +F + + S++K +M L++ M + +L +V PG V LVF+ G+A+I+ L+ + + P HS +S EE VF P +KIII+TNIAE S+TI+DV +V+D G K RYD + L SWVS+A+A QR+GR GRV G L+T F LS PEI PL+ + L++K+++ F + R I PP + + AA L ++GAL A++ +P LG L L VD+ I ++M+ G + A+ +AASL Sbjct: 591 LPAWQEKDTILAMLEGCQVLVVSGMTGCGKTTQIPQFILDASLRGPAGQVANIICTQPRRISAISVAQRVAQERAESLGKSVGYQIRLE-SVRSSSTRLLYCTTGVLLRRLEGEADLTGVTHVIVDEVHERTEESDFLLLVLKDLIVQ-----RPDLKIILMSATLNANLFSEYFYNCPTV---HIPGRTFPVDQFFLEDAIEKTGYVIEDGSPFMRSGKQNVSSVG-GR------------GGKDSRDLVEDLSEDVWNFMSLCKKDFVKDSIPDQQL----SFQDLTMRYKDTKKSVLKTMAAMD-----LDKINMDLVESILEWIVDGKHNYPPGAV-LVFMPGLAEIKMLYEQLQSNRMFNNRGAKRCVVYPLHSTLSNEEQQAVFSRPQDGVTKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDATKSMESLEDSWVSRANALQRKGRAGRVASGVCFHLFTSHCFQHHLSEQQLPEIQRVPLEQLCLRIKVLDVFAEQTLESVFTRLIEPPAMGSLEAAKQRLQDLGALTADEKLTP---LGYHLACLPVDVRIGKLMLFGAIFRCLDPALTIAASLAF 1142 The following BLAST results are available for this feature:
BLAST of EWM20730.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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