EWM20737.1, cds9940 (CDS) Nannochloropsis gaditana

Overview
NameEWM20737.1
Unique Namecds9940
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:12583..12659 +
Alignment locationKK037259.1:12748..12904 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20737.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100261g5.1654.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:12583..12659 +
KK037259.1supercontigKK037259.1:12748..12904 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20737.1 vs. NCBI_GenBank
Match: gi|585100596|gb|EWM20737.1| (hypothetical protein Naga_100261g5 [Nannochloropsis gaditana])

HSP 1 Score: 154.836 bits (390), Expect = 8.464e-48
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 
Query:    1 MDCQIGRWHQWKNSLCRDIRSSWKSSGSSNKTLLPDSPSLFISLCFKSSITDSSPEAFPSTDLYDIIRASIKIFFSF 77
            MDCQIGRWHQWKNSLCRDIRSSWKSSGSSNKTLLPDSPSLFISLCFKSSITDSSPEAFPSTDLYDIIRASIKIFFSF
Sbjct:    1 MDCQIGRWHQWKNSLCRDIRSSWKSSGSSNKTLLPDSPSLFISLCFKSSITDSSPEAFPSTDLYDIIRASIKIFFSF 77
The following BLAST results are available for this feature:
BLAST of EWM20737.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100596|gb|EWM20737.1|8.464e-48100.00hypothetical protein Naga_100261g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9971rna9971Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications