EWM20734.1, cds9939 (CDS) Nannochloropsis gaditana

Overview
NameEWM20734.1
Unique Namecds9939
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037259.1:7675..8127 +
Alignment locationKK037259.1:8245..8745 +
Alignment locationKK037259.1:8940..9078 +
Alignment locationKK037259.1:9197..11328 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20734.1
Productprotein of unknown function DUF21
Orig transcript idgnl|cribi|Naga_100261g4.1651.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037259.1supercontigKK037259.1:7675..8127 +
KK037259.1supercontigKK037259.1:8245..8745 +
KK037259.1supercontigKK037259.1:8940..9078 +
KK037259.1supercontigKK037259.1:9197..11328 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR002550DUF21
Homology
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|585100593|gb|EWM20734.1| (protein of unknown function DUF21 [Nannochloropsis gaditana])

HSP 1 Score: 2171.74 bits (5626), Expect = 0.000e+0
Identity = 1074/1074 (100.00%), Postives = 1074/1074 (100.00%), Query Frame = 0
Query:    1 MVLRLLPYSNTVLYSSNGHENILTASTPAPIVRRSTVSNIRNRIFNHVWTVLLCVLLLPKMATASFSLVKFLEGTVSAESYPGPSSSYLRTRDGRKHRYLAVLEQDKVSRDEVQRQEPSWRGGSGRAIDERDIHRGGEREERDEWLEQCFAVLARHPDASALCHSLARPRAAHSALDASMESTDIGASGPPRSHFSSRALHATIQDSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVLTAEEEEEEKEMSVVPTEGRREEAQGASRSMRSFSLRAHRKGPGDGPGREGGQDEGRGGSPFSVGRHASKYAHSPALFPSIAHNQDGSPVSTNVSSMTSSQSQLSLARGLSSNKSVIISSAMMGRYPSLPLSTPAASATARALAAAAAAAASEEAPRRPSPSLGGDATVNTSLRPISFVSSTSTSSSTASSNTVYNWLRLRHAVKRYSRAQLEQLMLDVEEEAERERGVEGTTKGTITRDGGPVEEEEEGPEEDGWEREEAGRTRKAGAEEGAGGERVVQLQKLSTVLHRSFRGGSLRVIREGRKEGEDVHAGAIAIPPDVQEANPELVEELMKE 1074
            MVLRLLPYSNTVLYSSNGHENILTASTPAPIVRRSTVSNIRNRIFNHVWTVLLCVLLLPKMATASFSLVKFLEGTVSAESYPGPSSSYLRTRDGRKHRYLAVLEQDKVSRDEVQRQEPSWRGGSGRAIDERDIHRGGEREERDEWLEQCFAVLARHPDASALCHSLARPRAAHSALDASMESTDIGASGPPRSHFSSRALHATIQDSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVLTAEEEEEEKEMSVVPTEGRREEAQGASRSMRSFSLRAHRKGPGDGPGREGGQDEGRGGSPFSVGRHASKYAHSPALFPSIAHNQDGSPVSTNVSSMTSSQSQLSLARGLSSNKSVIISSAMMGRYPSLPLSTPAASATARALAAAAAAAASEEAPRRPSPSLGGDATVNTSLRPISFVSSTSTSSSTASSNTVYNWLRLRHAVKRYSRAQLEQLMLDVEEEAERERGVEGTTKGTITRDGGPVEEEEEGPEEDGWEREEAGRTRKAGAEEGAGGERVVQLQKLSTVLHRSFRGGSLRVIREGRKEGEDVHAGAIAIPPDVQEANPELVEELMKE
Sbjct:    1 MVLRLLPYSNTVLYSSNGHENILTASTPAPIVRRSTVSNIRNRIFNHVWTVLLCVLLLPKMATASFSLVKFLEGTVSAESYPGPSSSYLRTRDGRKHRYLAVLEQDKVSRDEVQRQEPSWRGGSGRAIDERDIHRGGEREERDEWLEQCFAVLARHPDASALCHSLARPRAAHSALDASMESTDIGASGPPRSHFSSRALHATIQDSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVLTAEEEEEEKEMSVVPTEGRREEAQGASRSMRSFSLRAHRKGPGDGPGREGGQDEGRGGSPFSVGRHASKYAHSPALFPSIAHNQDGSPVSTNVSSMTSSQSQLSLARGLSSNKSVIISSAMMGRYPSLPLSTPAASATARALAAAAAAAASEEAPRRPSPSLGGDATVNTSLRPISFVSSTSTSSSTASSNTVYNWLRLRHAVKRYSRAQLEQLMLDVEEEAERERGVEGTTKGTITRDGGPVEEEEEGPEEDGWEREEAGRTRKAGAEEGAGGERVVQLQKLSTVLHRSFRGGSLRVIREGRKEGEDVHAGAIAIPPDVQEANPELVEELMKE 1074          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|553194197|ref|XP_005855903.1| (magnesium and cobalt efflux protein, partial [Nannochloropsis gaditana CCMP526] >gi|422293147|gb|EKU20447.1| magnesium and cobalt efflux protein, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1025.39 bits (2650), Expect = 0.000e+0
Identity = 501/501 (100.00%), Postives = 501/501 (100.00%), Query Frame = 0
Query:   16 SNGHENILTASTPAPIVRRSTVSNIRNRIFNHVWTVLLCVLLLPKMATASFSLVKFLEGTVSAESYPGPSSSYLRTRDGRKHRYLAVLEQDKVSRDEVQRQEPSWRGGSGRAIDERDIHRGGEREERDEWLEQCFAVLARHPDASALCHSLARPRAAHSALDASMESTDIGASGPPRSHFSSRALHATIQDSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKRE 516
            SNGHENILTASTPAPIVRRSTVSNIRNRIFNHVWTVLLCVLLLPKMATASFSLVKFLEGTVSAESYPGPSSSYLRTRDGRKHRYLAVLEQDKVSRDEVQRQEPSWRGGSGRAIDERDIHRGGEREERDEWLEQCFAVLARHPDASALCHSLARPRAAHSALDASMESTDIGASGPPRSHFSSRALHATIQDSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKRE
Sbjct:    1 SNGHENILTASTPAPIVRRSTVSNIRNRIFNHVWTVLLCVLLLPKMATASFSLVKFLEGTVSAESYPGPSSSYLRTRDGRKHRYLAVLEQDKVSRDEVQRQEPSWRGGSGRAIDERDIHRGGEREERDEWLEQCFAVLARHPDASALCHSLARPRAAHSALDASMESTDIGASGPPRSHFSSRALHATIQDSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKRE 501          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|553184354|ref|XP_005854073.1| (cbs domain multi-pass transmembrane, partial [Nannochloropsis gaditana CCMP526] >gi|422294988|gb|EKU22287.1| cbs domain multi-pass transmembrane, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 352.443 bits (903), Expect = 1.545e-111
Identity = 175/175 (100.00%), Postives = 175/175 (100.00%), Query Frame = 0
Query:  618 REAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVLTAEEEEEEKEMSVVPTEGRREEAQGASRSMRSFSLRAHRKGPGDGPGREGGQ 792
            REAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVLTAEEEEEEKEMSVVPTEGRREEAQGASRSMRSFSLRAHRKGPGDGPGREGGQ
Sbjct:    1 REAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVLTAEEEEEEKEMSVVPTEGRREEAQGASRSMRSFSLRAHRKGPGDGPGREGGQ 175          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|1210525118|dbj|GAX16052.1| (hypothetical protein FisN_20Hh274 [Fistulifera solaris])

HSP 1 Score: 242.276 bits (617), Expect = 1.358e-65
Identity = 181/534 (33.90%), Postives = 253/534 (47.38%), Query Frame = 0
Query:  219 WIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIG-TVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPAL--LSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRL----VRCPIVVAPSCPLIDILSTFQLG-----HAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVL 740
            +++L  A  CV  AA+A+GLT+G+++++PL L IKER G T EER  A  LLP++N+ H LLVTLLL N+ A EALP+FL+ALVP  +A++LSVT VLFFGEI PSAIF GPNQLKL  R+ P+V   +   +PIA PIA  LD  L DE G    Y+R EL+AL+ I+ +QR   K   +                  S+A+   G+R  AL   S  + +SF  S                             K  R T       +G S     PV  ++         S  L   EV +  G LQ+  KV  D   P   V  + +D  L+E  L  I A+G++R+PV                                                    +++ G++LTK LI VD       G  K+ L    +R P  V+P+ PL+++L+  Q+G       H+AL+   P+        +    G   PE    +GI+TLED++E +LQ +I+DE D RER  S L
Sbjct:   84 YLNLLAAGFCVSLAAVAAGLTLGMLAMDPLMLLIKERAGETEEERKMASTLLPIVNQHHRLLVTLLLMNSIANEALPIFLEALVPPSVAILLSVTMVLFFGEIIPSAIFTGPNQLKLAHRLVPLVQAALFLLYPIAGPIAKILDHVLHDEDGDTNGYNRGELAALIRINYEQRLAQKRMKRNQR--------------DSMAMVVQGERVGALDFTSTRSLTSFDVS-----------------------------KSMRATTSQLTRTEG-SDEVFAPVKSSSEPILMTRSPSFHLD--EVLMAEGALQMKTKVAYDVFTPLRKVFSVPIDMILSERNLVKIYASGYTRVPVH----------------------------------------------AADNKSAIIGFMLTKQLIVVD-------GKDKRPLSTLPLRTPYCVSPTMPLVNLLNLLQMGGEKGRGGHMALICARPDVG-----NRALSSGQEVPETAGLMGIVTLEDILEALLQEQIYDEMDARERAASRL 513          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|1210512094|dbj|GAX28949.1| (hypothetical protein FisN_20Lh274 [Fistulifera solaris])

HSP 1 Score: 235.728 bits (600), Expect = 2.146e-63
Identity = 175/533 (32.83%), Postives = 249/533 (46.72%), Query Frame = 0
Query:  219 WIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIG-TVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPAL--LSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHS--TLLSKR------EVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLG-----HAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRER 735
            + +L  A  CV  AA+A+GLT+G+++++PL L IKER G T EER  A  LLP++N+ H LLVTLLL N+ A EALP+FL+ALVP  +A++LSVT VLFFGEI PSAIF GPNQLKL  R+ P+V   +   +PIA PIA  LD  L DE G    Y+R EL+AL+ I+ +QR   K   +                  ++A+   G+R  AL   S  + +SF  S                             K  R         +G  +           AFAP    S   L+++       EV +  G LQ+  KV  D   P   V  + +D  L+E  L  I A+G++R+PV                                                    +++ G +LTK LI VD      +  +  R+  C   V+P+ PL+++L+  Q+G       H+AL+   P+        +    G   PE    +GI+TLED++E +LQ +I+DE D RER
Sbjct:   84 YFNLLAAGFCVSLAAVAAGLTLGMLAMDPLMLLIKERAGETEEERKMASTLLPIVNQHHRLLVTLLLMNSIANEALPIFLEALVPPSVAILLSVTMVLFFGEIIPSAIFTGPNQLKLAHRLVPLVHLALFLLYPIAGPIAKILDHVLHDEDGDPHGYNRGELAALIRINYEQRLAQKRTKRNQR--------------DNMAMVVQGERVGALDFTSTRSLTSFDNS-----------------------------KSMRAATNQLTRTEGNDA-----------AFAPIKSSSEPILITRSPSFHLDEVLMAEGALQMKTKVAYDVFTPLRKVFSVPIDMVLSERNLVNIYASGYTRVPVH----------------------------------------------AADNKSAILGVMLTKQLIVVDGKDKRPLSTLPLRIPNC---VSPTMPLVNLLNLLQMGGEKGRGGHMALICARPDVG-----NRALSLGQAVPETAGLIGIVTLEDILEALLQEQIYDEMDARER 508          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|673045437|ref|XP_008876679.1| (hypothetical protein H310_11700 [Aphanomyces invadans] >gi|574467712|gb|ETV94734.1| hypothetical protein H310_11700 [Aphanomyces invadans])

HSP 1 Score: 220.705 bits (561), Expect = 1.462e-58
Identity = 172/515 (33.40%), Postives = 249/515 (48.35%), Query Frame = 0
Query:  229 VMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHS------------TLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETD 731
            +  A + +GLT+GL+S++ L L+I +  GT +E+ QA +LLP++ + HLLLVTLLLFNAAA EALP+FL  +V    AV++SVT VL FGEI PSAIF G  QL + + + P V  L+   FP+ACPIA  LDR+LG++H    RY R+EL AL+ +H KQ +        D   AT   TP +  S+       GK      SLH  +  PP       LL+     S    + E+DA                +   ++ S    PP+   ++PP PH               L   EV I+ G + +S K V   M P+  V  L V+  LN+  +  I A+G+SR+PV                                      +G R           +V G +L K LI ++P        +K  ++R PIV++P      IL+ FQ G +H ALV+   +   AC     +G   + P  +  +GI+T+EDV+E ++  EI DE+D
Sbjct:   32 IAVAGMMAGLTMGLLSLDQLNLQILQTSGTDDEKDQAEKLLPIVKQHHLLLVTLLLFNAAANEALPVFLSRIVTEAQAVLISVTCVLLFGEIIPSAIFTGKQQLVIAAALVPFVRLLMFVAFPLACPIAKLLDRWLGEDHDFS-RYKRKELKALVALHHKQSQKWLRKTTRDLTIATSSLTPMIEESN-------GKHKALYGSLHVTA--PP-------LLSTTRGFSSSGDQEEDDALPV-------------DSDATNESTLTAPPSVPMYSPP-PHEFGTATPLYSMTGNYLHNDEVAIIHGAMDMSTKTVQMIMTPYDKVFMLDVEERLNDAVMVRILASGYSRIPV-------------------------------------YKGHRN----------NVVGLLLVKRLIVLNPAEE---KPLKDLILRRPIVISPDHSCYSILNLFQEGRSHFALVTPQKDLVTAC----WKGNADIDPAVVDMLGIVTIEDVLEELIMEEIVDESD 461          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|698810826|ref|XP_009838442.1| (hypothetical protein, variant 1 [Aphanomyces astaci] >gi|574106482|gb|ETV71999.1| hypothetical protein, variant 1 [Aphanomyces astaci])

HSP 1 Score: 210.69 bits (535), Expect = 3.272e-55
Identity = 168/514 (32.68%), Postives = 241/514 (46.89%), Query Frame = 0
Query:  226 FACVM-------AAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQ-RRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETD 731
            F CV+        A + +GLT+GL+S++ L L+I +  G  +E+ QA RLLP++ + HLLLV+LLLFNAAA EALP+FL  +V    AV++SVT VLFFGEI PSAIF G  QL + + + P V  L+   FPIA PIA  LDR+LG++H    RY R+EL AL+ +H KQ ++        D   +T   TP L    S +     +  P  L+L + SS                          ED  + +                  +SP P P  A A    +     L   EV I+ G + +S K V   M P+  V  L V+  L +  +  I A+G+SR+PV                                             + G R   +V G +L K LI ++P        +K  ++R PIV++P      IL+ FQ G +H ALV+   E   AC      G   + P ++  +GI+T+EDV+E ++  EI DE+D
Sbjct:   22 FVCVLTIIGLIAVAGMMAGLTMGLLSLDQLNLQILQTSGADDEKVQAERLLPIVKKHHLLLVSLLLFNAAANEALPVFLSRVVTEAQAVMISVTCVLFFGEIIPSAIFTGKQQLAIAAALVPFVKLLMLVTFPIAFPIAKLLDRWLGEDHDFS-RYKRKELKALVALHHKQSQKKWLRQSTRDLGTSTTALTPLLEDKPS-SYGSVRRPPPPRLTLRSFSS-------------------------SEDQDDKMPLEMTPTDAAAAPAVVPMYSPPPRPEYAAATPLYSMTGNYLHNDEVAIIHGAMDMSTKTVQMIMTPFDKVFMLDVEEKLCDTVMVRILASGYSRIPV---------------------------------------------YKGHR--TNVVGLLLVKRLIVLNPAEE---KPLKDLILRRPIVISPEHSCYSILNLFQEGRSHFALVTPQKEAVAAC----WRGNADIDPSKVQILGIVTIEDVLEELIMEEIVDESD 454          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|698810828|ref|XP_009838443.1| (hypothetical protein, variant 2 [Aphanomyces astaci] >gi|574106483|gb|ETV72000.1| hypothetical protein, variant 2 [Aphanomyces astaci])

HSP 1 Score: 210.305 bits (534), Expect = 3.361e-55
Identity = 163/539 (30.24%), Postives = 248/539 (46.01%), Query Frame = 0
Query:  206 DSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQRRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVLTAEE 744
            D +GF        ++ L ++   V+ A I +GLT+GL+S++ L LEI +  G+  E++ A RLLP++ + HLLLVTLL FN+ A EALP+FL  +VP   AV++SV+ VLFFGEI P+AIF G  QL + + + PVV  L    FP+A P+A  LD  LGD+H    RY R +L AL+ +H   R+      K+D + A   + P L           GK+T    + + A++ PP          +A P+                           ++  S+H                     L   EV I+ G + +S K V   M P+  V  L V+  L +  +  I A+G+SR+PV                                             + G R   +V G +L K LI ++P        +K  ++R PIV++P      IL+ FQ G +HLALV+   E    C     +    + P ++  +G++T+EDV+E ++  EI DE+DV  R  + L  E+
Sbjct:   33 DPHGF--------YMALAVSVGLVVVAGIMAGLTMGLLSLDQLNLEILQTTGSATEQTYARRLLPVVRQHHLLLVTLLFFNSIANEALPVFLARIVPEAYAVVISVSCVLFFGEIIPAAIFTGKAQLPIAAALVPVVRVLTFVAFPLAWPVAKALDCVLGDDHD-VSRYKRNQLKALVALH--HRKSLNQLKKSDTSHA---SVPLL-----------GKKTS---TSYEATTHPPHP-------TDAQPVD------------------------SDDESTSAH---------------------LHNDEVAIIHGAMDMSTKTVQMIMTPFDKVFMLDVEEKLCDTVMVRILASGYSRIPV---------------------------------------------YKGHR--TNVVGLLLVKRLIVLNPAEE---KPLKDLILRRPIVISPEHSCYSILNLFQEGRSHLALVTSQKEVVTGC----WKANVDIDPSKVEILGVVTIEDVLEEIIMEEILDESDVPLRPPAELAREQ 437          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|698810824|ref|XP_009838441.1| (hypothetical protein H257_12808 [Aphanomyces astaci] >gi|574106481|gb|ETV71998.1| hypothetical protein H257_12808 [Aphanomyces astaci])

HSP 1 Score: 210.69 bits (535), Expect = 4.410e-55
Identity = 170/527 (32.26%), Postives = 247/527 (46.87%), Query Frame = 0
Query:  226 FACVM-------AAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIHLKQ-RRGGKNGDKADEAQATPGATPSLVPSSSLALAPAGKRTPALLSLHTASSFPPSALASHALLANASPLSPPEVRLEEDAQEGVKKGRRTKKGKKHNQGQSSHSPGPVPPAAGAFAPPAPHSTLLSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRERTESVLTAEE 744
            F CV+        A + +GLT+GL+S++ L L+I +  G  +E+ QA RLLP++ + HLLLV+LLLFNAAA EALP+FL  +V    AV++SVT VLFFGEI PSAIF G  QL + + + P V  L+   FPIA PIA  LDR+LG++H    RY R+EL AL+ +H KQ ++        D   +T   TP L    S +     +  P  L+L + SS                          ED  + +                  +SP P P  A A    +     L   EV I+ G + +S K V   M P+  V  L V+  L +  +  I A+G+SR+PV                                             + G R   +V G +L K LI ++P        +K  ++R PIV++P      IL+ FQ G +HLALV+   E    C     +    + P ++  +G++T+EDV+E ++  EI DE+DV  R  + L  E+
Sbjct:   22 FVCVLTIIGLIAVAGMMAGLTMGLLSLDQLNLQILQTSGADDEKVQAERLLPIVKKHHLLLVSLLLFNAAANEALPVFLSRVVTEAQAVMISVTCVLFFGEIIPSAIFTGKQQLAIAAALVPFVKLLMLVTFPIAFPIAKLLDRWLGEDHDFS-RYKRKELKALVALHHKQSQKKWLRQSTRDLGTSTTALTPLLEDKPS-SYGSVRRPPPPRLTLRSFSS-------------------------SEDQDDKMPLEMTPTDAAAAPAVVPMYSPPPRPEYAAATPLYSMTGNYLHNDEVAIIHGAMDMSTKTVQMIMTPFDKVFMLDVEEKLCDTVMVRILASGYSRIPV---------------------------------------------YKGHR--TNVVGLLLVKRLIVLNPAEE---KPLKDLILRRPIVISPEHSCYSILNLFQEGRSHLALVTSQKEVVTGC----WKANVDIDPSKVEILGVVTIEDVLEEIIMEEILDESDVPLRPPAELAREQ 467          
BLAST of EWM20734.1 vs. NCBI_GenBank
Match: gi|585108725|gb|EWM26637.1| (protein mam3 [Nannochloropsis gaditana])

HSP 1 Score: 206.453 bits (524), Expect = 3.537e-53
Identity = 103/192 (53.65%), Postives = 135/192 (70.31%), Query Frame = 0
Query:  205 QDSNGFATFQTPSSWIHLGLAFACVMAAAIASGLTIGLMSIEPLELEIKERIGTVEERSQAHRLLPLLNRRHLLLVTLLLFNAAAAEALPLFLDALVPGYIAVILSVTAVLFFGEIFPSAIFMGPNQLKLGSRMTPVVWCLICFFFPIACPIAWCLDRFLGDEHGHGKRYSREELSALMEIH-----LKQRR 391
             D+ G+A  +   SW  LG A  CV+ AA A+GLT+GLMS++PLELE+K R+GT EER  A ++ PL+   H LLVTLLLFN+ A EALP+FL  LVPGY+AV+LSVTA+L FGEI PSAIF GPNQ+ + +  +  V+ L+  F+PIA PI   LD++LG  H   KRY+REELS L+++      +K RR
Sbjct:    5 DDNAGYADMRDIGSWYQLGGAVVCVICAAFAAGLTVGLMSLDPLELEVKRRVGTPEERKHAEKICPLIAPHHRLLVTLLLFNSIANEALPIFLSGLVPGYVAVLLSVTAILIFGEIIPSAIFTGPNQIIMAAHFSGFVYFLMGVFWPIAYPIGKVLDKWLG--HNSFKRYTREELSTLVDLQREVGVVKHRR 194          

HSP 2 Score: 98.2117 bits (243), Expect = 2.036e-17
Identity = 75/224 (33.48%), Postives = 105/224 (46.88%), Query Frame = 0
Query:  512 LSKREVDIVVGVLQISNKVVADCMVPWTSVCCLAVDAPLNEETLKAIRAAGFSRLPVCFRQGGGKEGREGGRGGSSGGEMNGTREDARASGREWREGRRGEGWVGKREAASVCGYVLTKSLIEVDPHAGLTVGAMKKRLVRCPIVVAPSCPLIDILSTFQLGHAHLALVSEAPEETLACLLGKGEGEGGLTPERIAPVGIITLEDVMEMMLQTEIWDETDVRER 735
            ++  E  IV GVL+   K + D + P   V  L  +  L+E  L  I A G+SR+PV              RG          R+D R                         G++L K LI +DP     V  +    +R PIVV+P+  L+++++ FQ G +H+A+VS  P+ T   L      EG     RIAP+GIITLED+ E +LQ EI+DE D RER
Sbjct:  224 ITVDEATIVAGVLKCHAKKICDALKPMDVVYTLCEEDILDENKLCEIMACGYSRIPV-----------HSARG----------RQDIR-------------------------GFLLVKRLIVLDPADRRPVRTLP---LRQPIVVSPTGSLLELINVFQEGRSHMAIVSPCPDLTRQALRSNKPLEG-----RIAPIGIITLEDLFEEILQEEIYDEHDDRER 393          
The following BLAST results are available for this feature:
BLAST of EWM20734.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100593|gb|EWM20734.1|0.000e+0100.00protein of unknown function DUF21 [Nannochloropsis... [more]
gi|553194197|ref|XP_005855903.1|0.000e+0100.00magnesium and cobalt efflux protein, partial [Nann... [more]
gi|553184354|ref|XP_005854073.1|1.545e-111100.00cbs domain multi-pass transmembrane, partial [Nann... [more]
gi|1210525118|dbj|GAX16052.1|1.358e-6533.90hypothetical protein FisN_20Hh274 [Fistulifera sol... [more]
gi|1210512094|dbj|GAX28949.1|2.146e-6332.83hypothetical protein FisN_20Lh274 [Fistulifera sol... [more]
gi|673045437|ref|XP_008876679.1|1.462e-5833.40hypothetical protein H310_11700 [Aphanomyces invad... [more]
gi|698810826|ref|XP_009838442.1|3.272e-5532.68hypothetical protein, variant 1 [Aphanomyces astac... [more]
gi|698810828|ref|XP_009838443.1|3.361e-5530.24hypothetical protein, variant 2 [Aphanomyces astac... [more]
gi|698810824|ref|XP_009838441.1|4.410e-5532.26hypothetical protein H257_12808 [Aphanomyces astac... [more]
gi|585108725|gb|EWM26637.1|3.537e-5353.65protein mam3 [Nannochloropsis gaditana][more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9970rna9970Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications