EWM20742.1, cds9932 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|585100604|gb|EWM20742.1| (conserved unknown protein [Nannochloropsis gaditana]) HSP 1 Score: 461.07 bits (1185), Expect = 2.501e-164 Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 0 Query: 1 MHDVDDHEDLTGATGLPRQLKVLDCKLRVLMDSCLSSSSQTADVEYVHSTLISELEAEHIVSIEDVFSVIQTFVPEEMLLSLGIEDEDDIELFVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMHKILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPLLKYQR 223 MHDVDDHEDLTGATGLPRQLKVLDCKLRVLMDSCLSSSSQTADVEYVHSTLISELEAEHIVSIEDVFSVIQTFVPEEMLLSLGIEDEDDIELFVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMHKILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPLLKYQR Sbjct: 1 MHDVDDHEDLTGATGLPRQLKVLDCKLRVLMDSCLSSSSQTADVEYVHSTLISELEAEHIVSIEDVFSVIQTFVPEEMLLSLGIEDEDDIELFVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMHKILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPLLKYQR 223
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|299472491|emb|CBN77276.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 118.627 bits (296), Expect = 1.804e-29 Identity = 59/107 (55.14%), Postives = 69/107 (64.49%), Query Frame = 0 Query: 117 SMSRESGCELCERAMPLTRHHLRPRAMHKILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPLLKYQR 223 S+S C LCER MPLTRHH+ P++ HK K+G S LN AICRPCHSAVHR +D LA F TV LLADE IG+FV WA KQR + N LL+Y+R Sbjct: 118 SVSEPGCCSLCERLMPLTRHHVMPKSTHKRYRKKGYSDAVLNRTIAICRPCHSAVHRAHDALALAERFTTVEELLADETIGRFVAWARKQRTTSVQDSRNNLLRYRR 224
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|1004139554|gb|KXZ47559.1| (hypothetical protein GPECTOR_34g718 [Gonium pectorale]) HSP 1 Score: 118.627 bits (296), Expect = 1.885e-29 Identity = 61/143 (42.66%), Postives = 83/143 (58.04%), Query Frame = 0 Query: 83 GIEDEDDIELFVSKVWLLLQK--ERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMHKILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPLLKYQR 223 G+E D++E F + L+ E + E E + GC +C R MPLT HHL PR +H K+G+ ++LN ICRPCHSA+HRTYDN+TLA ++YT+ LLA E + KFV WA KQ+ NP +Y+R Sbjct: 75 GVE-PDEVEGFADALHRLIVSAVESAVAELEGSEDDEQANIGGCAMCGRQMPLTFHHLIPRDVHDKYKKKGLGTEQLNAGIDICRPCHSAIHRTYDNKTLAAHYYTLHRLLASEPLQKFVAWARKQKVTTASDITNPRFRYRR 216
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|159472637|ref|XP_001694451.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158276675|gb|EDP02446.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 108.997 bits (271), Expect = 4.115e-27 Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 0 Query: 124 CELCERAMPLTRHHLRPRAMHKILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPLLKYQR 223 C LC R MPLT HHL PR +H ++ ++ +ELN +CRPCHSA+HRTYDN+TLA ++ T+ ALL E + KF+RWA KQ+ ++ NP +Y+R Sbjct: 1 CALCGRQMPLTFHHLIPRDVHAKYKRKALTAEELNRGVDVCRPCHSAIHRTYDNKTLAASYSTLEALLQSEPLQKFIRWAQKQKVTTREDMANPNFRYRR 100
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|1045914134|gb|OCH91230.1| (hypothetical protein OBBRIDRAFT_544041 [Obba rivulosa]) HSP 1 Score: 108.612 bits (270), Expect = 1.093e-25 Identity = 66/161 (40.99%), Postives = 90/161 (55.90%), Query Frame = 0 Query: 52 ISELEAEHIVSIEDVFSVIQTFVPE---EMLLSLGIEDEDDIEL-FVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMHKILLKQGM-SQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQR 207 + E E ++ DV S+ VP + L+S GI D+ D L F+ K + + V S +R + CE+CER +PLT HHL PR +H +LK+G Q LN A +CRPCHSAVH+ NE LA +FYTV LL E I K+ ++A+KQR Sbjct: 57 VREATYESRANVPDVESLSLDAVPASFADTLISCGIADDSDAALSFLRKA----LADYIADAAAPPPVWSKTRATECEICEREIPLTYHHLIPRQVHAKVLKKGWHPQAMLNSVAWLCRPCHSAVHQVASNEVLARSFYTVELLLEREDIQKWRKYAAKQR 213
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|630358097|ref|XP_007868349.1| (hypothetical protein GLOTRDRAFT_79058 [Gloeophyllum trabeum ATCC 11539] >gi|521722680|gb|EPQ53041.1| hypothetical protein GLOTRDRAFT_79058 [Gloeophyllum trabeum ATCC 11539]) HSP 1 Score: 106.686 bits (265), Expect = 6.004e-25 Identity = 66/138 (47.83%), Postives = 81/138 (58.70%), Query Frame = 0 Query: 72 TFVPEEMLLSLGI-EDEDDIELFVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMH-KILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQR 207 TFV E L+S GI D+D ++ KV L KE V S +R CELC R +PLT HHL PR+ H K L K+ QD LN A +CRPCHSAVHR NE LA ++YT+ LL E I K+ ++ASKQR Sbjct: 83 TFV--ETLVSYGICSDDDSAVRWLRKVLLDYVKETCAPPP----VWSTTRTKECELCGREVPLTYHHLIPRSTHAKALKKKWHPQDMLNSVAWLCRPCHSAVHRAASNEDLARSYYTLELLLEREDIQKWAKYASKQR 214
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|527299402|gb|EPT00204.1| (hypothetical protein FOMPIDRAFT_61440 [Fomitopsis pinicola FP-58527 SS1]) HSP 1 Score: 106.301 bits (264), Expect = 8.667e-25 Identity = 64/142 (45.07%), Postives = 84/142 (59.15%), Query Frame = 0 Query: 68 SVIQTFVPEEMLLSLGIEDE-DDIELFVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMH-KILLKQGMSQDELNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQR 207 +V FV + L+S GI D+ DD+ F+ KV + + + T V S +R S CE+CER +P+T HHL PR +H K L K S+ LN A +CRPCHS VHR +NE LA FYTV LL E I K+ ++ SKQR Sbjct: 77 TVPTAFV--DTLISCGIADDVDDVVAFLRKV----LADYIEEVTAPPPVWSKTRTSECEICEREVPVTYHHLIPREVHTKALKKNWHSEGMLNSVAWLCRPCHSTVHRVANNEELAKQFYTVDRLLEREDIQKWRKYISKQR 212
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|1000777709|gb|KXN68992.1| (hypothetical protein CONCODRAFT_79537 [Conidiobolus coronatus NRRL 28638]) HSP 1 Score: 105.531 bits (262), Expect = 1.561e-24 Identity = 58/135 (42.96%), Postives = 79/135 (58.52%), Query Frame = 0 Query: 86 DEDDIELFVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMHKILLKQG-MSQDELNICAA-ICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMGHNPL 218 +E ++ELF + L+ + E +E + CELCER MPLT HHL PR H L K+G ++D++ ICRPCH+ +HRTYDN LAIN+ TV LL EK+ KF+ + SKQ+ R + G PL Sbjct: 70 NESELELFSITLSRRLKDNLIFGEVPVEE----EDKGSCELCEREMPLTFHHLIPRETHSHLAKKGTFTKDDMRTRGTNICRPCHTHLHRTYDNLELAINYNTVEKLLESEKVCKFIEYISKQKIRSRVRGAVPL 200
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|646393724|gb|KDQ58181.1| (hypothetical protein JAAARDRAFT_57926 [Jaapia argillacea MUCL 33604]) HSP 1 Score: 104.76 bits (260), Expect = 4.262e-24 Identity = 66/145 (45.52%), Postives = 88/145 (60.69%), Query Frame = 0 Query: 72 TFVPEEMLLSLG-IEDEDDIELFVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMHKILLKQGMSQDE-LNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQRGREQKMG 214 TF+ + L+S G + D DD+ FV KV KE T+ S +R+S CE+CERA+PLT HHL PR++H +LK+G ++E L A +CR CHS VH NE LA NFYTV LL E I K+ +A+KQR R ++ G Sbjct: 80 TFI--DSLISYGLVGDSDDVIKFVEKVLDDYVKEACEPPPTN---WSGTRKSECEICERAVPLTYHHLIPRSVHTKVLKKGWHREEMLGSVAWLCRHCHSTVHHVASNEELARNFYTVDLLLEREDIQKWRNYAAKQR-RGKRRG 218
BLAST of EWM20742.1 vs. NCBI_GenBank
Match: gi|1023233346|gb|KZT30127.1| (hypothetical protein NEOLEDRAFT_1160105 [Neolentinus lepideus HHB14362 ss-1]) HSP 1 Score: 104.375 bits (259), Expect = 4.708e-24 Identity = 76/198 (38.38%), Postives = 104/198 (52.53%), Query Frame = 0 Query: 29 VLMDSCLSSSSQTAD------VEYVHS----TLISELEAEHIVSIEDVFSV----IQTFVPE---EMLLSLGI-EDEDDIELFVSKVWLLLQKERVIQETTDDEVMSMSRESGCELCERAMPLTRHHLRPRAMHKILLKQGMSQDE-LNICAAICRPCHSAVHRTYDNETLAINFYTVSALLADEKIGKFVRWASKQR 207 +LMD L+SS +TA V Y+ S L EL ++ +V + ++ P E LLS GI +DD + KV ++ V + + S +R CELC R +PLT HHL PR+ H +LK+ +E LN A +CRPCHSAVHR NE LA ++YT+ LL E I K+ R+ASKQR Sbjct: 16 LLMDPELTSSEETAASELDDFVSYLSSEIWPCLPKELRNASYSTLANVPGIDEFALEELTPPTVIESLLSYGICSGDDDAFRLLRKV----LQDYVKELCAPPPIWSATRAKECELCGREVPLTYHHLIPRSTHAKVLKRKWHPEEMLNSVAWLCRPCHSAVHRVASNEDLARSYYTLDLLLEREDIQKWTRYASKQR 209 The following BLAST results are available for this feature:
BLAST of EWM20742.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|