EWM20741.1, cds9929 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM20741.1 vs. NCBI_GenBank
Match: gi|585100603|gb|EWM20741.1| (hypothetical protein Naga_100249g4 [Nannochloropsis gaditana]) HSP 1 Score: 1239.56 bits (3206), Expect = 0.000e+0 Identity = 603/603 (100.00%), Postives = 603/603 (100.00%), Query Frame = 0
Query: 1 MRRDDDDAVADQDKSDESYQETGHETEAFVETLMTMSSSYESESESISPSPMQSNVSSTSHMRMQAPHYRERSSRHPTPSLSLAEHETAEGEMKSRGYKKENRRLEKQEDRDNTTEVGPAMDREGHDQFHCSGACDIGLCECYQKAPPDALEKEASTSENPAGFNVLPRLSFTGRSSFVPLLSSPSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRLGGEGAKIPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSRASLFPSRTTSDPPFEEQERERRHAGGRGGASRPTEQEEGLVAGTGAAGQDEERAEEEGNQANESLYAAVSLTSPVSSPSSLPSAPSVLSSEPSSSSDTALHPHFSLHAAAPITTIPLPLPQPPHHFVQETSSAQSLFEPNLRPLASPSEIPPLQWSPMQRDRPKKEAAKDEELGGKPAETSVAAKILAKKRMMTHKATYICHMSRTSVDDMHVQNK 603
MRRDDDDAVADQDKSDESYQETGHETEAFVETLMTMSSSYESESESISPSPMQSNVSSTSHMRMQAPHYRERSSRHPTPSLSLAEHETAEGEMKSRGYKKENRRLEKQEDRDNTTEVGPAMDREGHDQFHCSGACDIGLCECYQKAPPDALEKEASTSENPAGFNVLPRLSFTGRSSFVPLLSSPSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRLGGEGAKIPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSRASLFPSRTTSDPPFEEQERERRHAGGRGGASRPTEQEEGLVAGTGAAGQDEERAEEEGNQANESLYAAVSLTSPVSSPSSLPSAPSVLSSEPSSSSDTALHPHFSLHAAAPITTIPLPLPQPPHHFVQETSSAQSLFEPNLRPLASPSEIPPLQWSPMQRDRPKKEAAKDEELGGKPAETSVAAKILAKKRMMTHKATYICHMSRTSVDDMHVQNK
Sbjct: 1 MRRDDDDAVADQDKSDESYQETGHETEAFVETLMTMSSSYESESESISPSPMQSNVSSTSHMRMQAPHYRERSSRHPTPSLSLAEHETAEGEMKSRGYKKENRRLEKQEDRDNTTEVGPAMDREGHDQFHCSGACDIGLCECYQKAPPDALEKEASTSENPAGFNVLPRLSFTGRSSFVPLLSSPSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRLGGEGAKIPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSRASLFPSRTTSDPPFEEQERERRHAGGRGGASRPTEQEEGLVAGTGAAGQDEERAEEEGNQANESLYAAVSLTSPVSSPSSLPSAPSVLSSEPSSSSDTALHPHFSLHAAAPITTIPLPLPQPPHHFVQETSSAQSLFEPNLRPLASPSEIPPLQWSPMQRDRPKKEAAKDEELGGKPAETSVAAKILAKKRMMTHKATYICHMSRTSVDDMHVQNK 603
BLAST of EWM20741.1 vs. NCBI_GenBank
Match: gi|553193038|ref|XP_005855698.1| (hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526] >gi|422293365|gb|EKU20665.1| hypothetical protein NGA_0645100 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 949.118 bits (2452), Expect = 0.000e+0 Identity = 484/562 (86.12%), Postives = 488/562 (86.83%), Query Frame = 0
Query: 62 MRMQAPHYRERSSRHPTPSLSLAEHETAEGEMKSRGYKKENRRLEKQEDRDNTTEVGPAMDREGHDQFHCSGACDIGLCECYQKAPPDALEKEASTSENPAGFNVLPRLSFTGRSSFVPLLSSPSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILD----------------------GAVSDAERRRLW-MSHANRLGGEGAK---------------------------------------IPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSRASLFPSRTTSDPPFEEQERERRHAGGRGGASRPTEQEEGLVAGTGAAGQDEERAEEEGNQANESLYAAVSLTSPVSSPSSLPSAPSVLSSEPSSSSDTALHPHFSLHAAAPITTIPLPLPQPPHHFVQETSSAQSLFEPNLRPLASPSEIPPLQWSPMQRDRPKKEAAKDEELG 561
MRMQAPHYRERSSRHPTPSLSLAEHETAEGEMKSRGYKKENRRLEKQEDRDNTTEVGPAMDREGHDQFHCSGACDIGLCECYQKAPPDALEKEASTSENPAGFNVLPRLSFTGRSSFVPLLSSPSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILD GA SDA ++L S A R+ G K +PDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSRASLFPSRTTSDPPFEEQERERRHAGGRGGASRPTEQEEGLVAGTGAAGQDEERAEEEGNQANESLYAAVSLTSPVSSPSSLPSAPSVLSSEPSSSSDTALHPHFSLHAAAPITTIPLPLPQPPHHF QETSSAQSLFEPNLRPLASPSEIPPLQWSPMQRDRPKKEAAKDEELG
Sbjct: 1 MRMQAPHYRERSSRHPTPSLSLAEHETAEGEMKSRGYKKENRRLEKQEDRDNTTEVGPAMDREGHDQFHCSGACDIGLCECYQKAPPDALEKEASTSENPAGFNVLPRLSFTGRSSFVPLLSSPSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRLGGEGAKSDAIFKQLNDGSRAIRMECLGGKERRLVVNDVYLTYFRRPEEFMKDAWARRCLIGFLLAATVVPDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSRASLFPSRTTSDPPFEEQERERRHAGGRGGASRPTEQEEGLVAGTGAAGQDEERAEEEGNQANESLYAAVSLTSPVSSPSSLPSAPSVLSSEPSSSSDTALHPHFSLHAAAPITTIPLPLPQPPHHFAQETSSAQSLFEPNLRPLASPSEIPPLQWSPMQRDRPKKEAAKDEELG 562
BLAST of EWM20741.1 vs. NCBI_GenBank
Match: gi|585100606|gb|EWM20744.1| (Zn(2)-C6 fungal-type DNA-binding domain protein [Nannochloropsis gaditana]) HSP 1 Score: 116.316 bits (290), Expect = 1.056e-23 Identity = 57/109 (52.29%), Postives = 74/109 (67.89%), Query Frame = 0
Query: 185 PSLDQIMELIDIRAMVPLYLQAFRELLQKGMLNRKRGIILLKYWREVKIQFGGNCDPTHGLFAEVQGAFWIADKELGSPSSILDGAVSDAERRRLWMSHANRLGGEGAK 293
P LD ++E D+ AMVPLYLQAF++L Q+G+LNRKR I LLK W ++ + G+CDPT G FAEV+ AF I D EL P + AE+ RLW + A+R+ GEGAK
Sbjct: 171 PYLDLVIERSDLPAMVPLYLQAFQDLFQEGVLNRKRAIGLLKSWVDLGVMMDGDCDPTFGAFAEVKAAFQINDLELEDPECLAYEPPLHAEKGRLWAARADRVLGEGAK 279 HSP 2 Score: 67.3958 bits (163), Expect = 3.936e-8 Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = 0
Query: 295 PDDRPSFFRELVQGALGNPGTRQTGLFKALDRHAQVNLFLFENRVVELSPGEFVSLIMFEPAPPSRHIPPQHPVARTRPLQEPICSTPSLPSRASLF 391
P+DR ++F+ L L ++T K DR ++ L+L +++VV++ P E+ SL + EPAPPSRH+ + V R R P C++ S AS+F
Sbjct: 346 PEDRLAYFKLLHFATLSTSLMKRTAFLKIFDRQGRMTLYLSDHQVVKMGPNEYASLCVTEPAPPSRHVTTRPDVTRLRSTHHP-CNSSS----ASMF 437 The following BLAST results are available for this feature:
BLAST of EWM20741.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 3
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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