EWM20745.1, cds9927 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|585100607|gb|EWM20745.1| (putative plastid-lipid-associated protein chloroplastic-like protein [Nannochloropsis gaditana]) HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0 Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0
Query: 1 MQRECLSGQRGKKNVLQRGRGGCRSSRTTILAQFLFIVCILTATASGYAFSTFLPLSHSTSENHASTTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV 263
MQRECLSGQRGKKNVLQRGRGGCRSSRTTILAQFLFIVCILTATASGYAFSTFLPLSHSTSENHASTTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV
Sbjct: 1 MQRECLSGQRGKKNVLQRGRGGCRSSRTTILAQFLFIVCILTATASGYAFSTFLPLSHSTSENHASTTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV 263
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|553193025|ref|XP_005855694.1| (plastid-lipid associated protein pap, partial [Nannochloropsis gaditana CCMP526] >gi|422293361|gb|EKU20661.1| plastid-lipid associated protein pap, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 394.43 bits (1012), Expect = 1.281e-137 Identity = 201/251 (80.08%), Postives = 201/251 (80.08%), Query Frame = 0
Query: 13 KNVLQRGRGGCRSSRTTILAQFLFIVCILTATASGYAFSTFLPLSHSTSENHASTTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV 263
KNVLQRGRGGCRSSRTTILAQFLFIVCILTATASGYAFSTFLPLSHSTSENHASTTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEE PSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV
Sbjct: 1 KNVLQRGRGGCRSSRTTILAQFLFIVCILTATASGYAFSTFLPLSHSTSENHASTTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEE--------------------------------------------------PSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV 201
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|298711617|emb|CBJ32674.1| (plastid-lipid associated protein PAP / fibrillin family protein [Ectocarpus siliculosus]) HSP 1 Score: 107.457 bits (267), Expect = 3.176e-24 Identity = 66/205 (32.20%), Postives = 102/205 (49.76%), Query Frame = 0
Query: 58 HSTSENHASTTPRMLLSGFFP--AGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVV 260
H+TS N+ + F+P TG ++ + KLK+ L +T+ + RG R+ + I A+ NP S TS S W L WTTE EI ++GL G V Q + + L N + F +S + S + PE SGPRV F +E ++ Y GF +P P V +++++YLD ++R RD+RG+ V+
Sbjct: 68 HATSSNN-------WFAQFWPNREDKTGETLEAAK-NKLKQRLLDTVRDTKRGISTSEEQRKDIDELIAAIEPFNPNAKSVTSESLSARWILEWTTEREIIFLMERGLPGKPSGPVEQDIDVDARTLSNRMIFGDDSLFEVASSIDPEDSGPRVNFEFEACKLKYGGFTIPLPP---VGKGWFESVYLDQDLRVTRDVRGDVTVL 261
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|676390147|ref|XP_009038352.1| (hypothetical protein AURANDRAFT_28329, partial [Aureococcus anophagefferens] >gi|323451245|gb|EGB07123.1| hypothetical protein AURANDRAFT_28329, partial [Aureococcus anophagefferens]) HSP 1 Score: 101.679 bits (252), Expect = 4.462e-23 Identity = 56/152 (36.84%), Postives = 81/152 (53.29%), Query Frame = 0
Query: 116 RERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGC-TCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEP---SGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV 263
R+R + + L A NPTP A SPL SG WDL+WTTE E++ +GL C V QT + + LEN + F +S L + S ++P P +G R F + + ++G +P P V + D +YLD +R RDIRG+ L+ R
Sbjct: 23 RDRFDELLALLEAANPTPRPAESPLFSGAWDLLWTTERELNFAMDKGLFAAGPCTGVSQTIDVAAGDLENTVLFDNDSKLFVGSSIAPSPDDAAGRRFDFKFSSCYLQWRGTKVPLPP---VGEGWGDILYLDDTLRVQRDIRGDLLIATRA 171
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|551607758|ref|XP_005785179.1| (hypothetical protein EMIHUDRAFT_471624 [Emiliania huxleyi CCMP1516] >gi|485638335|gb|EOD32750.1| hypothetical protein EMIHUDRAFT_471624 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 105.531 bits (262), Expect = 6.341e-23 Identity = 74/224 (33.04%), Postives = 109/224 (48.66%), Query Frame = 0
Query: 57 SHSTSENHA--------STTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNL--GGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQTTE------QSTQRLENIIEFSQNSALRIISKLSPEPS-GPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRRV 263
SH + HA T R+L P+G + + S K ++ S RG V ++R A+ L+A+NPTP A SPL SGTW+ VWTTE E++ +GLLG + QT + + L N+IEF + LR+ S +SP+ G R F+++ V ++ LP P V + + +YLD E+R RD+RG+ LV RV
Sbjct: 145 SHPPCQRHALGSTLLLTPYTQRLLGGLTLPSGRGAAARGSL------KAEIRSLAASSRGGVLPFDAAQQQRFDAALAELSALNPTPEPARSPLFSGTWECVWTTESELNFAVDKGLLGLPWRRTYQTIDVPRGALTTPSTLTNVIEFEEGGFLRVGSTISPDAERGERFSFSFDSCAVRWRSLELPLPP---VGRGWGELLYLDDELRVQRDVRGDLLVATRV 359
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|551605080|ref|XP_005783977.1| (hypothetical protein EMIHUDRAFT_231716 [Emiliania huxleyi CCMP1516] >gi|551617118|ref|XP_005789400.1| hypothetical protein EMIHUDRAFT_252286 [Emiliania huxleyi CCMP1516] >gi|485637015|gb|EOD31548.1| hypothetical protein EMIHUDRAFT_231716 [Emiliania huxleyi CCMP1516] >gi|485642909|gb|EOD36971.1| hypothetical protein EMIHUDRAFT_252286 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 105.916 bits (263), Expect = 1.214e-22 Identity = 71/224 (31.70%), Postives = 102/224 (45.54%), Query Frame = 0
Query: 47 GYAFSTFLPLSHSTSENHASTTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQTTEQSTQ--------RLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRR 262
G A ++L + + + +S P L S P R+ +LK L E G G R LAA+ PT + A+SPL GTWD++WTTE E+ K+GLLG C A Q ++ + L+N IEF LR+ S P SG RV F ++ ++ LP P V + ++D +Y+D E+R RD RG+ V R
Sbjct: 220 GEAADSYLFVLTRATPSESSRAPAGLPSPLAPLARAAERR------RLKAQLLEACGGQSLGAEAGAEDLRRVRDLSDRLAALTPTADPASSPLLCGTWDIIWTTESELLALTKRGLLGLPCTAAYQAIARTREGGAGPWAYSLDNAIEF-DGGFLRVGSTCEPAASGGRVNFVFQSCAARWRALELPLPP---VGSGWFDVLYVDEELRVCRDSRGDLQVCAR 433
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|922860410|gb|KOO28300.1| (putative plastid-lipid-associated protein chloroplastic-like protein [Chrysochromulina sp. CCMP291]) HSP 1 Score: 98.2117 bits (243), Expect = 7.892e-20 Identity = 63/183 (34.43%), Postives = 86/183 (46.99%), Query Frame = 0
Query: 90 QIKKLKKTLFETMEGSDRGRVNLGGGRERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTEEEIHLFRKQGLLGCTCQAVLQT-------TEQSTQR------LENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLV 259
Q + LK L + EG G GR R I I+ L +NPT A S GTW +VWTTE E+ GLLG CQ QT E+ QR L N I F + LR+ S P+ G RV F +E ++ LP P V + +++ +YLD ++R D+RG++ V
Sbjct: 275 QRRALKTALMQACEGQRLGAATDEAGRARIINLIRELEQLNPTARPAQSTKLLGTWRVVWTTESELLALTNSGLLGLPCQGASQTIGRTAAADERGAQRGAFDYSLSNEISF-EGGFLRVGSSCEPQAQGGRVNFRFESCAAKWRSVQLPLPP---VGSGWFEVLYLDEDLRLCTDVRGDWQV 453
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|703072316|ref|XP_010089253.1| (putative plastid-lipid-associated protein 11 [Morus notabilis] >gi|587847182|gb|EXB37578.1| putative plastid-lipid-associated protein 11 [Morus notabilis]) HSP 1 Score: 92.4337 bits (228), Expect = 4.536e-19 Identity = 69/206 (33.50%), Postives = 96/206 (46.60%), Query Frame = 0
Query: 63 NHASTTPRMLLSGFFPAGTTGSRKDSTQIKKLKKTLFETMEGSDRGRVNLGGGRERT-----IQAIQALAAVNPTPNSATSPLASGTWDLVWTTE-EEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRR 262
H S P++ S +G KK L + G DRG L R T ++AI ALA + + S L S TW L+WTTE E++ + K L G VLQ + +RL N+I F + + S + S RV F + A + K + +P P F ++D +YLD EIR V+DIRG+YLVV R
Sbjct: 18 KHTSHAPKITCSSLTAQSQSG-----------KKELLRLIAGEDRG---LKTQRNPTKLASIVKAIDALADLGAGAVTTGSSL-SATWRLLWTTEKEQLFIIDKASLFGTRAGDVLQVIDVEKRRLNNVITFPPDGVFFVRSDIEIA-SKQRVNFRFTSAVLRGKNWEIPLPPF---GQGWFDTVYLDDEIRVVKDIRGDYLVVDR 204
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|297814333|ref|XP_002875050.1| (probable plastid-lipid-associated protein 11 isoform X1 [Arabidopsis lyrata subsp. lyrata] >gi|297320887|gb|EFH51309.1| plastid-lipid associated protein pap [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 92.0485 bits (227), Expect = 4.575e-19 Identity = 57/175 (32.57%), Postives = 95/175 (54.29%), Query Frame = 0
Query: 92 KKLKKTLFETMEGSDRGRVNLGGG--RERTIQAIQALAAVNPTPNSATSPLASGTWDLVWTTE-EEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGP-RVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRR 262
++ K+ L E + DRG R+ + AI+++A + + + L+S TW L+WTTE E++ + K GL G T VLQ + + + L N+I F + + S + E + P RV F + A + K + +P P F +++N+Y+D+EIR +DIRG+YL+V R
Sbjct: 34 QRAKRKLLELISEEDRGVRTQKDATKRDAIVDAIESMAVIGRSSITTGESLSS-TWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRSDI--EIASPQRVNFRFNSAVLRAKNWEIPLPPF---GKGWFENVYMDAEIRVAKDIRGDYLIVDR 202
BLAST of EWM20745.1 vs. NCBI_GenBank
Match: gi|15236688|ref|NP_191914.1| (Plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] >gi|75100154|sp|O81304.1|PAP11_ARATH RecName: Full=Probable plastid-lipid-associated protein 11; AltName: Full=Fibrillin-9 >gi|3193328|gb|AAC19310.1| F6N15.13 gene product [Arabidopsis thaliana] >gi|7267090|emb|CAB80761.1| predicted protein of unknown function [Arabidopsis thaliana] >gi|15809917|gb|AAL06886.1| AT4g00030/F6N15_13 [Arabidopsis thaliana] >gi|18377823|gb|AAL67098.1| AT4g00030/F6N15_13 [Arabidopsis thaliana] >gi|332656416|gb|AEE81816.1| Plastid-lipid associated protein PAP / fibrillin family protein [Arabidopsis thaliana] >gi|1032284462|gb|OAO98789.1| hypothetical protein AXX17_AT4G00050 [Arabidopsis thaliana]) HSP 1 Score: 90.1225 bits (222), Expect = 3.107e-18 Identity = 56/174 (32.18%), Postives = 91/174 (52.30%), Query Frame = 0
Query: 92 KKLKKTLFETMEGSDRGRVNLGGGRERT--IQAIQALAAVNPTPNSATSPLASGTWDLVWTTE-EEIHLFRKQGLLGCTCQAVLQTTEQSTQRLENIIEFSQNSALRIISKLSPEPSGPRVYFTWEDARVIYKGFVLPFPSFFFVKNAYYDNIYLDSEIRCVRDIRGNYLVVRR 262
++ K+ L E + DRG ++R + AI+++ + + + L S TW L+WTTE E++ + K GL G T VLQ + + + L N+I F + + S + S RV F + A + K + LP P F +++N+Y+D EIR +DIRG+YL+V R
Sbjct: 34 QRAKRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDDSL-SATWRLLWTTEKEQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRSDIDIA-SPQRVNFRFNSAVLRGKNWELPLPPF---GKGWFENVYMDGEIRVAKDIRGDYLIVDR 202 The following BLAST results are available for this feature:
BLAST of EWM20745.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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