EWM20750.1, cds9923 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|585100616|gb|EWM20750.1| (hydrolase [Nannochloropsis gaditana]) HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query: 1 MFIPPPYLLCPVVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLPGRHRILKFSNCDVVSLTILVRQIELFFFKKILARGVEDGTPKKHLKGCARNDKIRDVGHGNDAICETFLNFL 265
MFIPPPYLLCPVVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLPGRHRILKFSNCDVVSLTILVRQIELFFFKKILARGVEDGTPKKHLKGCARNDKIRDVGHGNDAICETFLNFL
Sbjct: 1 MFIPPPYLLCPVVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLPGRHRILKFSNCDVVSLTILVRQIELFFFKKILARGVEDGTPKKHLKGCARNDKIRDVGHGNDAICETFLNFL 265
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|299470097|emb|CBN78126.1| (Haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus]) HSP 1 Score: 205.682 bits (522), Expect = 2.146e-61 Identity = 99/181 (54.70%), Postives = 130/181 (71.82%), Query Frame = 0
Query: 12 VVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWL 192
V +V LT + FCI+TTSPKPRVP S+ A KLD YFP +K+HSGESDFDPPRFKP P VYLKAA E P +C+AVEDSGSGVGSA+NAG+GL +GYVG SHIP KK +HAEMLMSGG++E+G+GA +V+ + +L +I + ++ GK+ + F +++I L+ VW+
Sbjct: 147 VPEVLAALTAAGVAFCISTTSPKPRVPASITACKLDEYFPADKVHSGESDFDPPRFKPNPSVYLKAAETEGKEPANCIAVEDSGSGVGSASNAGVGLTVGYVGASHIPDYKKDTHAEMLMSGGRAENGKGAEIVISDMTDLPKVIEFFAGEKIA-----GKSAPFDFPEELISSLKQPVWV 322
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|303280061|ref|XP_003059323.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226459159|gb|EEH56455.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 194.512 bits (493), Expect = 1.352e-56 Identity = 96/179 (53.63%), Postives = 122/179 (68.16%), Query Frame = 0
Query: 15 VCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLP 193
V +L + IPFCI+TTS KPRVP+SV + YFPPEKIHSGESDFDPPRFKP P VYL AA +E+ P +CVAVEDS SGVGSAANA +GLI+GYVGG+HI D+K SHA L +GG+S+DGRGA +V+ + +L L+ + E ++ + F + L+G WLP
Sbjct: 193 VLASLKAKGIPFCISTTSGKPRVPVSVVSCGYTEYFPPEKIHSGESDFDPPRFKPDPSVYLLAAKSEDADPKNCVAVEDSTSGVGSAANANVGLIVGYVGGTHITEDRKTSHAGTLTAGGRSDDGRGADIVIRDMVDLVPLVETFAASAEMKDAAKKP---VVFEKATLDALKGEYWLP 368
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|553193031|ref|XP_005855696.1| (hypothetical protein NGA_0644900 [Nannochloropsis gaditana CCMP526] >gi|422293363|gb|EKU20663.1| hypothetical protein NGA_0644900 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 184.496 bits (467), Expect = 3.435e-56 Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0
Query: 106 MGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLPGRHRILK 200
MGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGG+GKAGSYSFSDDVIQKLQGRVWLPG ++K
Sbjct: 1 MGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGKGKAGSYSFSDDVIQKLQGRVWLPGGKVVVK 95
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|929752369|ref|XP_014151167.1| (hypothetical protein SARC_10274 [Sphaeroforma arctica JP610] >gi|906944836|gb|KNC77265.1| hypothetical protein SARC_10274 [Sphaeroforma arctica JP610]) HSP 1 Score: 183.726 bits (465), Expect = 5.444e-53 Identity = 103/191 (53.93%), Postives = 129/191 (67.54%), Query Frame = 0
Query: 9 LCPVVDVC----QTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEK-IHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIR-VYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLP 193
LC VD C Q+L + +CIATTS KPRVP+ V AA + YFP + IHSGESDF PPRFKPAPDVY+KAA A+ A DCVAVEDSGSGVGSAANA +GLI+GYVG HI K HA+MLMSGG+SE+GRGA +V+ RNL L+ VY ++ ++ K ++ + D + + G+ WLP
Sbjct: 133 LCRPVDGCLEVLQSLNNNGLSYCIATTSGKPRVPVCVDAANIRNYFPTDDFIHSGESDFTPPRFKPAPDVYMKAANAQGKAYEDCVAVEDSGSGVGSAANAKLGLIVGYVGAGHIAEAAKDEHAKMLMSGGRSENGRGAAIVL---RNLQDLLPIVYAFEKFRKDSPDSKPSDFNVA-DCVGSIGGQHWLP 319
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|255080326|ref|XP_002503743.1| (predicted protein [Micromonas commoda] >gi|226519010|gb|ACO65001.1| predicted protein [Micromonas commoda]) HSP 1 Score: 172.17 bits (435), Expect = 3.358e-48 Identity = 90/167 (53.89%), Postives = 112/167 (67.07%), Query Frame = 0
Query: 26 FCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWL 192
F IATTS KPRVP+SV A + + YFPPEKIHSGESDF+PPRFKP P VYL AA P + VAVEDS SGVGSAANA MGLI+GYVGGSHI + + HA LM+G +S+DGRGA +VV + R+L ++ +K + G K G F ++ L + W+
Sbjct: 175 FSIATTSGKPRVPVSVVACQYEEYFPPEKIHSGESDFEPPRFKPDPSVYLLAAEKTAALPANSVAVEDSTSGVGSAANAKMGLIVGYVGGSHISDENEDGHAGTLMAGERSDDGRGADIVVRDMRDLVPVVEHFK----SVVGSGEKEGPVKFPRALLDGLVDKYWV 337
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|651208721|gb|AIC75600.1| (mannitol-1-phosphatase [Saccharina japonica]) HSP 1 Score: 167.933 bits (424), Expect = 4.544e-46 Identity = 86/150 (57.33%), Postives = 104/150 (69.33%), Query Frame = 0
Query: 12 VVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQ 161
+V+ L K+PF IATTSPKPRVP S+ A LD YFP +K+HSGESDFDPPRFKP P VYLKAA E P CVAVEDS SGVGSA A MGLI+GYVG SHI A +K+ HA+ML RGA +VV+E ++L +L+ + +
Sbjct: 234 MVNALDELRARKLPFAIATTSPKPRVPASIHACGLDDYFPADKVHSGESDFDPPRFKPDPSVYLKAAQFEGALPPLCVAVEDSASGVGSAYAAEMGLIVGYVGASHISASRKSEHAKMLRH-------RGARVVVDEMKDLITLVDCFAE 376
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|298714887|emb|CBJ27643.1| (Haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus]) HSP 1 Score: 166.777 bits (421), Expect = 1.607e-45 Identity = 87/150 (58.00%), Postives = 101/150 (67.33%), Query Frame = 0
Query: 12 VVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQ 161
+VD L K+PF IATTSPKPRVP SV A LD YFP +KIHSGESDFDPPRFKP P VYL+AA E P CVAVEDS SGVGSA A MGLI+GYVG SHI ++K HA+ML RGA +VV+ R+L L+ + +
Sbjct: 237 MVDTLDELKARKVPFAIATTSPKPRVPASVHACGLDDYFPADKIHSGESDFDPPRFKPDPSVYLRAAQYEGVIPPICVAVEDSASGVGSAFAAEMGLIVGYVGASHISEERKTEHAKMLRV-------RGARVVVDNMRDLIPLVDCFTE 379
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|255086331|ref|XP_002509132.1| (predicted protein [Micromonas commoda] >gi|226524410|gb|ACO70390.1| predicted protein [Micromonas commoda]) HSP 1 Score: 169.474 bits (428), Expect = 3.183e-44 Identity = 78/134 (58.21%), Postives = 104/134 (77.61%), Query Frame = 0
Query: 26 FCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVY 159
+ ++TTSPKPRVP+ ++ A+L +FP EK+HSG SDFDPP++KPAPDVY+KAAAAE +C+AVEDS SGVGSAANA +GLI+GYVGGSHIP D++ A+ LM GGKS D RGA +V+ + +L ++ +
Sbjct: 679 YAVSTTSPKPRVPVCIETARLTDFFPEEKVHSGFSDFDPPKYKPAPDVYIKAAAAEEVPVDNCIAVEDSVSGVGSAANAKIGLIVGYVGGSHIPYDRREEQAKALMKGGKSIDRRGADIVITDMTDLPTVANFF 812
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|303284671|ref|XP_003061626.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226456956|gb|EEH54256.1| predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 159.073 bits (401), Expect = 1.160e-40 Identity = 79/134 (58.96%), Postives = 99/134 (73.88%), Query Frame = 0
Query: 26 FCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVY 159
F I+TTSPK RV + +L FP EKIHSG SDFDPPRFKPAPDVYLKAAAAE C+AVEDS SGVGSAA+AG+ LI+GYVGG HI A+ +AE L++GGKS++GRGA +V+ + +L S++ +
Sbjct: 615 FAISTTSPKSRVIACLDTMRLADDFPQEKIHSGSSDFDPPRFKPAPDVYLKAAAAEEVGVEACIAVEDSLSGVGSAADAGVALIVGYVGGGHITAEALDGYAEALLAGGKSKNGRGADVVIRDMEDLPSVVNTF 748 The following BLAST results are available for this feature:
BLAST of EWM20750.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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