EWM20750.1, cds9923 (CDS) Nannochloropsis gaditana

Overview
NameEWM20750.1
Unique Namecds9923
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037258.1:93653..93660 -
Alignment locationKK037258.1:93585..93609 -
Alignment locationKK037258.1:93336..93499 -
Alignment locationKK037258.1:92762..93144 -
Alignment locationKK037258.1:92572..92662 -
Alignment locationKK037258.1:92389..92515 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20750.1
Producthydrolase
Orig transcript idgnl|cribi|Naga_101026g1.7357.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:93653..93660 -
KK037258.1supercontigKK037258.1:93585..93609 -
KK037258.1supercontigKK037258.1:93336..93499 -
KK037258.1supercontigKK037258.1:92762..93144 -
KK037258.1supercontigKK037258.1:92572..92662 -
KK037258.1supercontigKK037258.1:92389..92515 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR006439HAD-SF_hydro_IA
IPR023214HAD-like_dom
Homology
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|585100616|gb|EWM20750.1| (hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 545.428 bits (1404), Expect = 0.000e+0
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
Query:    1 MFIPPPYLLCPVVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLPGRHRILKFSNCDVVSLTILVRQIELFFFKKILARGVEDGTPKKHLKGCARNDKIRDVGHGNDAICETFLNFL 265
            MFIPPPYLLCPVVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLPGRHRILKFSNCDVVSLTILVRQIELFFFKKILARGVEDGTPKKHLKGCARNDKIRDVGHGNDAICETFLNFL
Sbjct:    1 MFIPPPYLLCPVVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLPGRHRILKFSNCDVVSLTILVRQIELFFFKKILARGVEDGTPKKHLKGCARNDKIRDVGHGNDAICETFLNFL 265          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|299470097|emb|CBN78126.1| (Haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus])

HSP 1 Score: 205.682 bits (522), Expect = 2.146e-61
Identity = 99/181 (54.70%), Postives = 130/181 (71.82%), Query Frame = 0
Query:   12 VVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWL 192
            V +V   LT   + FCI+TTSPKPRVP S+ A KLD YFP +K+HSGESDFDPPRFKP P VYLKAA  E   P +C+AVEDSGSGVGSA+NAG+GL +GYVG SHIP  KK +HAEMLMSGG++E+G+GA +V+ +  +L  +I  +  ++       GK+  + F +++I  L+  VW+
Sbjct:  147 VPEVLAALTAAGVAFCISTTSPKPRVPASITACKLDEYFPADKVHSGESDFDPPRFKPNPSVYLKAAETEGKEPANCIAVEDSGSGVGSASNAGVGLTVGYVGASHIPDYKKDTHAEMLMSGGRAENGKGAEIVISDMTDLPKVIEFFAGEKIA-----GKSAPFDFPEELISSLKQPVWV 322          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|303280061|ref|XP_003059323.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226459159|gb|EEH56455.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 194.512 bits (493), Expect = 1.352e-56
Identity = 96/179 (53.63%), Postives = 122/179 (68.16%), Query Frame = 0
Query:   15 VCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLP 193
            V  +L  + IPFCI+TTS KPRVP+SV +     YFPPEKIHSGESDFDPPRFKP P VYL AA +E+  P +CVAVEDS SGVGSAANA +GLI+GYVGG+HI  D+K SHA  L +GG+S+DGRGA +V+ +  +L  L+  +    E ++  +       F    +  L+G  WLP
Sbjct:  193 VLASLKAKGIPFCISTTSGKPRVPVSVVSCGYTEYFPPEKIHSGESDFDPPRFKPDPSVYLLAAKSEDADPKNCVAVEDSTSGVGSAANANVGLIVGYVGGTHITEDRKTSHAGTLTAGGRSDDGRGADIVIRDMVDLVPLVETFAASAEMKDAAKKP---VVFEKATLDALKGEYWLP 368          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|553193031|ref|XP_005855696.1| (hypothetical protein NGA_0644900 [Nannochloropsis gaditana CCMP526] >gi|422293363|gb|EKU20663.1| hypothetical protein NGA_0644900 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 184.496 bits (467), Expect = 3.435e-56
Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0
Query:  106 MGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLPGRHRILK 200
            MGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGG+GKAGSYSFSDDVIQKLQGRVWLPG   ++K
Sbjct:    1 MGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGKGKAGSYSFSDDVIQKLQGRVWLPGGKVVVK 95          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|929752369|ref|XP_014151167.1| (hypothetical protein SARC_10274 [Sphaeroforma arctica JP610] >gi|906944836|gb|KNC77265.1| hypothetical protein SARC_10274 [Sphaeroforma arctica JP610])

HSP 1 Score: 183.726 bits (465), Expect = 5.444e-53
Identity = 103/191 (53.93%), Postives = 129/191 (67.54%), Query Frame = 0
Query:    9 LCPVVDVC----QTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEK-IHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIR-VYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWLP 193
            LC  VD C    Q+L    + +CIATTS KPRVP+ V AA +  YFP +  IHSGESDF PPRFKPAPDVY+KAA A+  A  DCVAVEDSGSGVGSAANA +GLI+GYVG  HI    K  HA+MLMSGG+SE+GRGA +V+   RNL  L+  VY  ++  ++    K   ++ + D +  + G+ WLP
Sbjct:  133 LCRPVDGCLEVLQSLNNNGLSYCIATTSGKPRVPVCVDAANIRNYFPTDDFIHSGESDFTPPRFKPAPDVYMKAANAQGKAYEDCVAVEDSGSGVGSAANAKLGLIVGYVGAGHIAEAAKDEHAKMLMSGGRSENGRGAAIVL---RNLQDLLPIVYAFEKFRKDSPDSKPSDFNVA-DCVGSIGGQHWLP 319          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|255080326|ref|XP_002503743.1| (predicted protein [Micromonas commoda] >gi|226519010|gb|ACO65001.1| predicted protein [Micromonas commoda])

HSP 1 Score: 172.17 bits (435), Expect = 3.358e-48
Identity = 90/167 (53.89%), Postives = 112/167 (67.07%), Query Frame = 0
Query:   26 FCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQDQETENGGQGKAGSYSFSDDVIQKLQGRVWL 192
            F IATTS KPRVP+SV A + + YFPPEKIHSGESDF+PPRFKP P VYL AA      P + VAVEDS SGVGSAANA MGLI+GYVGGSHI  + +  HA  LM+G +S+DGRGA +VV + R+L  ++  +K    +  G   K G   F   ++  L  + W+
Sbjct:  175 FSIATTSGKPRVPVSVVACQYEEYFPPEKIHSGESDFEPPRFKPDPSVYLLAAEKTAALPANSVAVEDSTSGVGSAANAKMGLIVGYVGGSHISDENEDGHAGTLMAGERSDDGRGADIVVRDMRDLVPVVEHFK----SVVGSGEKEGPVKFPRALLDGLVDKYWV 337          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|651208721|gb|AIC75600.1| (mannitol-1-phosphatase [Saccharina japonica])

HSP 1 Score: 167.933 bits (424), Expect = 4.544e-46
Identity = 86/150 (57.33%), Postives = 104/150 (69.33%), Query Frame = 0
Query:   12 VVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQ 161
            +V+    L   K+PF IATTSPKPRVP S+ A  LD YFP +K+HSGESDFDPPRFKP P VYLKAA  E   P  CVAVEDS SGVGSA  A MGLI+GYVG SHI A +K+ HA+ML         RGA +VV+E ++L +L+  + +
Sbjct:  234 MVNALDELRARKLPFAIATTSPKPRVPASIHACGLDDYFPADKVHSGESDFDPPRFKPDPSVYLKAAQFEGALPPLCVAVEDSASGVGSAYAAEMGLIVGYVGASHISASRKSEHAKMLRH-------RGARVVVDEMKDLITLVDCFAE 376          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|298714887|emb|CBJ27643.1| (Haloacid dehalogenase-like hydrolase [Ectocarpus siliculosus])

HSP 1 Score: 166.777 bits (421), Expect = 1.607e-45
Identity = 87/150 (58.00%), Postives = 101/150 (67.33%), Query Frame = 0
Query:   12 VVDVCQTLTEEKIPFCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVYKQ 161
            +VD    L   K+PF IATTSPKPRVP SV A  LD YFP +KIHSGESDFDPPRFKP P VYL+AA  E   P  CVAVEDS SGVGSA  A MGLI+GYVG SHI  ++K  HA+ML         RGA +VV+  R+L  L+  + +
Sbjct:  237 MVDTLDELKARKVPFAIATTSPKPRVPASVHACGLDDYFPADKIHSGESDFDPPRFKPDPSVYLRAAQYEGVIPPICVAVEDSASGVGSAFAAEMGLIVGYVGASHISEERKTEHAKMLRV-------RGARVVVDNMRDLIPLVDCFTE 379          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|255086331|ref|XP_002509132.1| (predicted protein [Micromonas commoda] >gi|226524410|gb|ACO70390.1| predicted protein [Micromonas commoda])

HSP 1 Score: 169.474 bits (428), Expect = 3.183e-44
Identity = 78/134 (58.21%), Postives = 104/134 (77.61%), Query Frame = 0
Query:   26 FCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVY 159
            + ++TTSPKPRVP+ ++ A+L  +FP EK+HSG SDFDPP++KPAPDVY+KAAAAE     +C+AVEDS SGVGSAANA +GLI+GYVGGSHIP D++   A+ LM GGKS D RGA +V+ +  +L ++   +
Sbjct:  679 YAVSTTSPKPRVPVCIETARLTDFFPEEKVHSGFSDFDPPKYKPAPDVYIKAAAAEEVPVDNCIAVEDSVSGVGSAANAKIGLIVGYVGGSHIPYDRREEQAKALMKGGKSIDRRGADIVITDMTDLPTVANFF 812          
BLAST of EWM20750.1 vs. NCBI_GenBank
Match: gi|303284671|ref|XP_003061626.1| (predicted protein [Micromonas pusilla CCMP1545] >gi|226456956|gb|EEH54256.1| predicted protein [Micromonas pusilla CCMP1545])

HSP 1 Score: 159.073 bits (401), Expect = 1.160e-40
Identity = 79/134 (58.96%), Postives = 99/134 (73.88%), Query Frame = 0
Query:   26 FCIATTSPKPRVPISVKAAKLDAYFPPEKIHSGESDFDPPRFKPAPDVYLKAAAAENCAPGDCVAVEDSGSGVGSAANAGMGLILGYVGGSHIPADKKASHAEMLMSGGKSEDGRGALLVVEEFRNLASLIRVY 159
            F I+TTSPK RV   +   +L   FP EKIHSG SDFDPPRFKPAPDVYLKAAAAE      C+AVEDS SGVGSAA+AG+ LI+GYVGG HI A+    +AE L++GGKS++GRGA +V+ +  +L S++  +
Sbjct:  615 FAISTTSPKSRVIACLDTMRLADDFPQEKIHSGSSDFDPPRFKPAPDVYLKAAAAEEVGVEACIAVEDSLSGVGSAADAGVALIVGYVGGGHITAEALDGYAEALLAGGKSKNGRGADVVIRDMEDLPSVVNTF 748          
The following BLAST results are available for this feature:
BLAST of EWM20750.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100616|gb|EWM20750.1|0.000e+0100.00hydrolase [Nannochloropsis gaditana][more]
gi|299470097|emb|CBN78126.1|2.146e-6154.70Haloacid dehalogenase-like hydrolase [Ectocarpus s... [more]
gi|303280061|ref|XP_003059323.1|1.352e-5653.63predicted protein [Micromonas pusilla CCMP1545] >g... [more]
gi|553193031|ref|XP_005855696.1|3.435e-5693.68hypothetical protein NGA_0644900 [Nannochloropsis ... [more]
gi|929752369|ref|XP_014151167.1|5.444e-5353.93hypothetical protein SARC_10274 [Sphaeroforma arct... [more]
gi|255080326|ref|XP_002503743.1|3.358e-4853.89predicted protein [Micromonas commoda] >gi|2265190... [more]
gi|651208721|gb|AIC75600.1|4.544e-4657.33mannitol-1-phosphatase [Saccharina japonica][more]
gi|298714887|emb|CBJ27643.1|1.607e-4558.00Haloacid dehalogenase-like hydrolase [Ectocarpus s... [more]
gi|255086331|ref|XP_002509132.1|3.183e-4458.21predicted protein [Micromonas commoda] >gi|2265244... [more]
gi|303284671|ref|XP_003061626.1|1.160e-4058.96predicted protein [Micromonas pusilla CCMP1545] >g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9954rna9954Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications