EWM20751.1, cds9922 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|585100617|gb|EWM20751.1| (hypothetical protein Naga_101026g2 [Nannochloropsis gaditana]) HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0 Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
Query: 1 MGRLLLLVRHLFPSVLLFLRLTAPADVNSPPSLRRAKPASVSLATDLVSWWWNDPLPPPPEYKGDPFLTLGESFGRPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLTGYSKPSLPLCSISPTLLPSLIPSRHRSFLHLCFALIPASILNSCFLCSLSIPLPSLPLSLLLSLTCLATSLLKHLAPGLISFPFPPRSSPLRFPRSLPLFSRRVPKADE 274
MGRLLLLVRHLFPSVLLFLRLTAPADVNSPPSLRRAKPASVSLATDLVSWWWNDPLPPPPEYKGDPFLTLGESFGRPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLTGYSKPSLPLCSISPTLLPSLIPSRHRSFLHLCFALIPASILNSCFLCSLSIPLPSLPLSLLLSLTCLATSLLKHLAPGLISFPFPPRSSPLRFPRSLPLFSRRVPKADE
Sbjct: 1 MGRLLLLVRHLFPSVLLFLRLTAPADVNSPPSLRRAKPASVSLATDLVSWWWNDPLPPPPEYKGDPFLTLGESFGRPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLTGYSKPSLPLCSISPTLLPSLIPSRHRSFLHLCFALIPASILNSCFLCSLSIPLPSLPLSLLLSLTCLATSLLKHLAPGLISFPFPPRSSPLRFPRSLPLFSRRVPKADE 274
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|585110212|gb|EWM27881.1| (hypothetical protein Naga_100323g2 [Nannochloropsis gaditana]) HSP 1 Score: 93.9745 bits (232), Expect = 3.404e-18 Identity = 57/182 (31.32%), Postives = 88/182 (48.35%), Query Frame = 0
Query: 67 FLTLGESFGRPARVVLPNAY-----------NETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLTGYSKPSLPLCSISP-----------TLLPSLIPSRHRSFLHLCFALIPASILNSCFLCSLSIPLPSLPLSLL 226
++TL E RPARVVLP+ Y +L+PL+++LHG+ S+ YHD +LG+SAR + + GGF+A++PNGT ++ FWN CCD+ DD YLT K ++ + P + ++ H ++ P I + C PS P+S+L
Sbjct: 155 YITLAEESERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARIN--QHGGFLALLPNGTVNS-EGKHFWNGIRCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEIPSVC--------APSHPISVL 325
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|816960203|gb|AKF09709.1| (Putative LIPOPROTEIN LPQP [Sandaracinus amylolyticus]) HSP 1 Score: 70.8626 bits (172), Expect = 1.170e-10 Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 76 RPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGT-CCDYSRSNVDDEKYLT 165
RPAR+V+P+A++ T L PLV++LHG+ ++ D Y + A R GF ++PNGT D+ R +RFWNA T CCD+ + VDD YLT
Sbjct: 44 RPARLVVPDAHDGTTPL-PLVVLLHGYSASAPLQDTYWRATQAA---RSMGFYLLLPNGTTDS-RGNRFWNATTACCDFDMTGVDDVAYLT 129
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|921301527|ref|WP_053236735.1| (hypothetical protein [Sandaracinus amylolyticus]) HSP 1 Score: 71.2478 bits (173), Expect = 1.215e-10 Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 0
Query: 76 RPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGT-CCDYSRSNVDDEKYLT 165
RPAR+V+P+A++ T L PLV++LHG+ ++ D Y + A R GF ++PNGT D+ R +RFWNA T CCD+ + VDD YLT
Sbjct: 53 RPARLVVPDAHDGTTPL-PLVVLLHGYSASAPLQDTYWRATQAA---RSMGFYLLLPNGTTDS-RGNRFWNATTACCDFDMTGVDDVAYLT 138
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|585101750|gb|EWM21518.1| (hypothetical protein Naga_100679g2 [Nannochloropsis gaditana]) HSP 1 Score: 69.707 bits (169), Expect = 6.292e-10 Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0
Query: 70 LGESFGRPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLT 165
+G GRPA V+ P + L PLV+VLH W SN H YLGVS R S + FIA++PNG ++ + RFWNA CC+ VDD YLT
Sbjct: 151 IGLESGRPAAVLYPPHAALSPPL-PLVVVLHAWGSNASEHAAYLGVSERLSRFQ---FIALLPNGIKNS-KGYRFWNAPACCNREGIAVDDLGYLT 241
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|1200493682|gb|OUW08007.1| (hypothetical protein CBD23_08435 [Gammaproteobacteria bacterium TMED163]) HSP 1 Score: 66.6254 bits (161), Expect = 6.599e-9 Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0
Query: 75 GR-PARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAG-TCCDYSRSNVDDEKYL 164
GR P ++++P YNE + PL+++LHG++S G D YLG S A+D GF+ + P G+ + ++ FWNA CCD+ SNVDD Y+
Sbjct: 29 GRGPVQLIVPQNYNE-KNSTPLIVLLHGFRSTGSIQDSYLGFSEIANDN---GFLFIAPTGSVNPEGKT-FWNATPACCDFFGSNVDDVGYI 115
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|1200494758|gb|OUW09059.1| (hypothetical protein CBD23_05730 [Gammaproteobacteria bacterium TMED163]) HSP 1 Score: 65.855 bits (159), Expect = 1.253e-8 Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0
Query: 75 GR-PARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAG-TCCDYSRSNVDDEKYL 164
GR P ++++P YNE + PL++ LHG++S G D YLG S A+D GF+ + P G+ + FWNA CCD+ SNVDD Y+
Sbjct: 29 GRGPVQLIVPQNYNE-KNSTPLIVXLHGFRSTGSIQDSYLGFSEIANDN---GFLFIAPTGSVNP-EGXTFWNATPACCDFFGSNVDDVGYI 115
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|949085125|gb|KRO76580.1| (hypothetical protein ABR72_06385, partial [OM182 bacterium BACL3 MAG-120920-bin41]) HSP 1 Score: 63.929 bits (154), Expect = 3.581e-8 Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 0
Query: 66 PFL---TLGESF--GR-PARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAG-TCCDYSRSNVDDEKYL 164
PFL GE+ GR P ++ +P YN + PL+++LHG++SNG D YLG S A+D GF+ + P G+ + + FWNA CCD+ SNVDD Y+
Sbjct: 15 PFLLSPAFGETIDQGRGPVQLTVPQNYN-GKNPTPLIVLLHGFRSNGSGQDSYLGFSDIANDN---GFLFIAPTGSVNP-EGNTFWNATPACCDFFSSNVDDVGYI 115
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|1199232696|gb|OUR99541.1| (hypothetical protein A9Q84_00545 [Halobacteriovorax marinus]) HSP 1 Score: 63.1586 bits (152), Expect = 5.561e-8 Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 0
Query: 78 ARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGT-CCDYSRSNVDDEKYLTG 166
A + LP Y + L PLV+ LHG+ N + ++YL + S GF+ +IPNGT ++ + FWNA CCD+ +S +DD+ Y+ G
Sbjct: 36 ANLFLPRGYKKAASL-PLVISLHGFGGNQNLQNWYLKLKKYTSKA---GFMLLIPNGTKNSAGKG-FWNASNFCCDFEKSKIDDQAYILG 120
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|1098023457|emb|SFB93024.1| (polyhydroxybutyrate depolymerase [Parapedobacter composti]) HSP 1 Score: 62.003 bits (149), Expect = 1.519e-7 Identity = 37/92 (40.22%), Postives = 49/92 (53.26%), Query Frame = 0
Query: 76 RPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTW-DAMRQSRFWNAGTCCDYS-RSNVDDEKYLT 165
R V LP Y E +PLV+ LHG + D + S +A GF+AV PNG D R WNAGTCCD++ R NVDD ++++
Sbjct: 58 RTFNVHLPPQYEEGADTFPLVIGLHGLGGSAVQFDRHYHFSGKADRE---GFVAVYPNGVRSDGRFGIRTWNAGTCCDFAMRENVDDVRFIS 146 The following BLAST results are available for this feature:
BLAST of EWM20751.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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