EWM20751.1, cds9922 (CDS) Nannochloropsis gaditana

Overview
NameEWM20751.1
Unique Namecds9922
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037258.1:91566..91573 -
Alignment locationKK037258.1:91051..91358 -
Alignment locationKK037258.1:90872..90978 -
Alignment locationKK037258.1:90247..90648 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20751.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101026g2.7358.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:91566..91573 -
KK037258.1supercontigKK037258.1:91051..91358 -
KK037258.1supercontigKK037258.1:90872..90978 -
KK037258.1supercontigKK037258.1:90247..90648 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
Homology
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|585100617|gb|EWM20751.1| (hypothetical protein Naga_101026g2 [Nannochloropsis gaditana])

HSP 1 Score: 538.495 bits (1386), Expect = 0.000e+0
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0
Query:    1 MGRLLLLVRHLFPSVLLFLRLTAPADVNSPPSLRRAKPASVSLATDLVSWWWNDPLPPPPEYKGDPFLTLGESFGRPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLTGYSKPSLPLCSISPTLLPSLIPSRHRSFLHLCFALIPASILNSCFLCSLSIPLPSLPLSLLLSLTCLATSLLKHLAPGLISFPFPPRSSPLRFPRSLPLFSRRVPKADE 274
            MGRLLLLVRHLFPSVLLFLRLTAPADVNSPPSLRRAKPASVSLATDLVSWWWNDPLPPPPEYKGDPFLTLGESFGRPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLTGYSKPSLPLCSISPTLLPSLIPSRHRSFLHLCFALIPASILNSCFLCSLSIPLPSLPLSLLLSLTCLATSLLKHLAPGLISFPFPPRSSPLRFPRSLPLFSRRVPKADE
Sbjct:    1 MGRLLLLVRHLFPSVLLFLRLTAPADVNSPPSLRRAKPASVSLATDLVSWWWNDPLPPPPEYKGDPFLTLGESFGRPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLTGYSKPSLPLCSISPTLLPSLIPSRHRSFLHLCFALIPASILNSCFLCSLSIPLPSLPLSLLLSLTCLATSLLKHLAPGLISFPFPPRSSPLRFPRSLPLFSRRVPKADE 274          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|585110212|gb|EWM27881.1| (hypothetical protein Naga_100323g2 [Nannochloropsis gaditana])

HSP 1 Score: 93.9745 bits (232), Expect = 3.404e-18
Identity = 57/182 (31.32%), Postives = 88/182 (48.35%), Query Frame = 0
Query:   67 FLTLGESFGRPARVVLPNAY-----------NETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLTGYSKPSLPLCSISP-----------TLLPSLIPSRHRSFLHLCFALIPASILNSCFLCSLSIPLPSLPLSLL 226
            ++TL E   RPARVVLP+ Y               +L+PL+++LHG+ S+  YHD +LG+SAR +  + GGF+A++PNGT ++     FWN   CCD+     DD  YLT   K ++    + P             +  ++   H        ++ P  I + C         PS P+S+L
Sbjct:  155 YITLAEESERPARVVLPDNYPADQSEDGSEDQAGAKLWPLIMMLHGYGSDASYHDHFLGLSARIN--QHGGFLALLPNGTVNS-EGKHFWNGIRCCDFDHQGPDDVTYLTSLVKEAIRTLDVDPRRVYMLGHSNGGAMTQILACEHGELFAAIASVTPGEIPSVC--------APSHPISVL 325          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|816960203|gb|AKF09709.1| (Putative LIPOPROTEIN LPQP [Sandaracinus amylolyticus])

HSP 1 Score: 70.8626 bits (172), Expect = 1.170e-10
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 0
Query:   76 RPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGT-CCDYSRSNVDDEKYLT 165
            RPAR+V+P+A++ T  L PLV++LHG+ ++    D Y   +  A   R  GF  ++PNGT D+ R +RFWNA T CCD+  + VDD  YLT
Sbjct:   44 RPARLVVPDAHDGTTPL-PLVVLLHGYSASAPLQDTYWRATQAA---RSMGFYLLLPNGTTDS-RGNRFWNATTACCDFDMTGVDDVAYLT 129          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|921301527|ref|WP_053236735.1| (hypothetical protein [Sandaracinus amylolyticus])

HSP 1 Score: 71.2478 bits (173), Expect = 1.215e-10
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 0
Query:   76 RPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGT-CCDYSRSNVDDEKYLT 165
            RPAR+V+P+A++ T  L PLV++LHG+ ++    D Y   +  A   R  GF  ++PNGT D+ R +RFWNA T CCD+  + VDD  YLT
Sbjct:   53 RPARLVVPDAHDGTTPL-PLVVLLHGYSASAPLQDTYWRATQAA---RSMGFYLLLPNGTTDS-RGNRFWNATTACCDFDMTGVDDVAYLT 138          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|585101750|gb|EWM21518.1| (hypothetical protein Naga_100679g2 [Nannochloropsis gaditana])

HSP 1 Score: 69.707 bits (169), Expect = 6.292e-10
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 0
Query:   70 LGESFGRPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGTCCDYSRSNVDDEKYLT 165
            +G   GRPA V+ P     +  L PLV+VLH W SN   H  YLGVS R S  +   FIA++PNG  ++ +  RFWNA  CC+     VDD  YLT
Sbjct:  151 IGLESGRPAAVLYPPHAALSPPL-PLVVVLHAWGSNASEHAAYLGVSERLSRFQ---FIALLPNGIKNS-KGYRFWNAPACCNREGIAVDDLGYLT 241          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|1200493682|gb|OUW08007.1| (hypothetical protein CBD23_08435 [Gammaproteobacteria bacterium TMED163])

HSP 1 Score: 66.6254 bits (161), Expect = 6.599e-9
Identity = 38/92 (41.30%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   75 GR-PARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAG-TCCDYSRSNVDDEKYL 164
            GR P ++++P  YNE +   PL+++LHG++S G   D YLG S  A+D    GF+ + P G+ +   ++ FWNA   CCD+  SNVDD  Y+
Sbjct:   29 GRGPVQLIVPQNYNE-KNSTPLIVLLHGFRSTGSIQDSYLGFSEIANDN---GFLFIAPTGSVNPEGKT-FWNATPACCDFFGSNVDDVGYI 115          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|1200494758|gb|OUW09059.1| (hypothetical protein CBD23_05730 [Gammaproteobacteria bacterium TMED163])

HSP 1 Score: 65.855 bits (159), Expect = 1.253e-8
Identity = 38/92 (41.30%), Postives = 54/92 (58.70%), Query Frame = 0
Query:   75 GR-PARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAG-TCCDYSRSNVDDEKYL 164
            GR P ++++P  YNE +   PL++ LHG++S G   D YLG S  A+D    GF+ + P G+ +      FWNA   CCD+  SNVDD  Y+
Sbjct:   29 GRGPVQLIVPQNYNE-KNSTPLIVXLHGFRSTGSIQDSYLGFSEIANDN---GFLFIAPTGSVNP-EGXTFWNATPACCDFFGSNVDDVGYI 115          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|949085125|gb|KRO76580.1| (hypothetical protein ABR72_06385, partial [OM182 bacterium BACL3 MAG-120920-bin41])

HSP 1 Score: 63.929 bits (154), Expect = 3.581e-8
Identity = 43/106 (40.57%), Postives = 61/106 (57.55%), Query Frame = 0
Query:   66 PFL---TLGESF--GR-PARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAG-TCCDYSRSNVDDEKYL 164
            PFL     GE+   GR P ++ +P  YN  +   PL+++LHG++SNG   D YLG S  A+D    GF+ + P G+ +    + FWNA   CCD+  SNVDD  Y+
Sbjct:   15 PFLLSPAFGETIDQGRGPVQLTVPQNYN-GKNPTPLIVLLHGFRSNGSGQDSYLGFSDIANDN---GFLFIAPTGSVNP-EGNTFWNATPACCDFFSSNVDDVGYI 115          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|1199232696|gb|OUR99541.1| (hypothetical protein A9Q84_00545 [Halobacteriovorax marinus])

HSP 1 Score: 63.1586 bits (152), Expect = 5.561e-8
Identity = 34/90 (37.78%), Postives = 52/90 (57.78%), Query Frame = 0
Query:   78 ARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTWDAMRQSRFWNAGT-CCDYSRSNVDDEKYLTG 166
            A + LP  Y +   L PLV+ LHG+  N +  ++YL +    S     GF+ +IPNGT ++  +  FWNA   CCD+ +S +DD+ Y+ G
Sbjct:   36 ANLFLPRGYKKAASL-PLVISLHGFGGNQNLQNWYLKLKKYTSKA---GFMLLIPNGTKNSAGKG-FWNASNFCCDFEKSKIDDQAYILG 120          
BLAST of EWM20751.1 vs. NCBI_GenBank
Match: gi|1098023457|emb|SFB93024.1| (polyhydroxybutyrate depolymerase [Parapedobacter composti])

HSP 1 Score: 62.003 bits (149), Expect = 1.519e-7
Identity = 37/92 (40.22%), Postives = 49/92 (53.26%), Query Frame = 0
Query:   76 RPARVVLPNAYNETRRLYPLVLVLHGWKSNGDYHDFYLGVSARASDPRLGGFIAVIPNGTW-DAMRQSRFWNAGTCCDYS-RSNVDDEKYLT 165
            R   V LP  Y E    +PLV+ LHG   +    D +   S +A      GF+AV PNG   D     R WNAGTCCD++ R NVDD ++++
Sbjct:   58 RTFNVHLPPQYEEGADTFPLVIGLHGLGGSAVQFDRHYHFSGKADRE---GFVAVYPNGVRSDGRFGIRTWNAGTCCDFAMRENVDDVRFIS 146          
The following BLAST results are available for this feature:
BLAST of EWM20751.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100617|gb|EWM20751.1|0.000e+0100.00hypothetical protein Naga_101026g2 [Nannochloropsi... [more]
gi|585110212|gb|EWM27881.1|3.404e-1831.32hypothetical protein Naga_100323g2 [Nannochloropsi... [more]
gi|816960203|gb|AKF09709.1|1.170e-1046.15Putative LIPOPROTEIN LPQP [Sandaracinus amylolytic... [more]
gi|921301527|ref|WP_053236735.1|1.215e-1046.15hypothetical protein [Sandaracinus amylolyticus][more]
gi|585101750|gb|EWM21518.1|6.292e-1045.83hypothetical protein Naga_100679g2 [Nannochloropsi... [more]
gi|1200493682|gb|OUW08007.1|6.599e-941.30hypothetical protein CBD23_08435 [Gammaproteobacte... [more]
gi|1200494758|gb|OUW09059.1|1.253e-841.30hypothetical protein CBD23_05730 [Gammaproteobacte... [more]
gi|949085125|gb|KRO76580.1|3.581e-840.57hypothetical protein ABR72_06385, partial [OM182 b... [more]
gi|1199232696|gb|OUR99541.1|5.561e-837.78hypothetical protein A9Q84_00545 [Halobacteriovora... [more]
gi|1098023457|emb|SFB93024.1|1.519e-740.22polyhydroxybutyrate depolymerase [Parapedobacter c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9953rna9953Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications