EWM20766.1, cds9906 (CDS) Nannochloropsis gaditana

Overview
NameEWM20766.1
Unique Namecds9906
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037258.1:34320..35207 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20766.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100356g4.1463.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:34320..35207 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20766.1 vs. NCBI_GenBank
Match: gi|585100645|gb|EWM20766.1| (hypothetical protein Naga_100356g4 [Nannochloropsis gaditana])

HSP 1 Score: 580.096 bits (1494), Expect = 0.000e+0
Identity = 295/295 (100.00%), Postives = 295/295 (100.00%), Query Frame = 0 
Query:    1 MREGEMKEGETGLERKRMERKEEEMQEEEKEIVPAFESTIQEEEKVTGRESEERGTREEEVEAKREDKAARATERRRACDRGKRKFGDTRVEEEWLMTKSIEKLRRLDQREEDWEDSKDKPREGMLTRGIKRRSSFGATGGGPSEGRKTPEKMRASKRDQCFVGGEKVENTSMMARNGNSHREEDDGGEESGGRNKRLWLRTTSERGDRDKKVKREKDHSQEEGRETAPSIDKTALGRMDEEVHHVTPGKGGGVKENQGRAAALWALTIEVHAWEQWEGACLKAPTPFGSPLIGW 295
            MREGEMKEGETGLERKRMERKEEEMQEEEKEIVPAFESTIQEEEKVTGRESEERGTREEEVEAKREDKAARATERRRACDRGKRKFGDTRVEEEWLMTKSIEKLRRLDQREEDWEDSKDKPREGMLTRGIKRRSSFGATGGGPSEGRKTPEKMRASKRDQCFVGGEKVENTSMMARNGNSHREEDDGGEESGGRNKRLWLRTTSERGDRDKKVKREKDHSQEEGRETAPSIDKTALGRMDEEVHHVTPGKGGGVKENQGRAAALWALTIEVHAWEQWEGACLKAPTPFGSPLIGW
Sbjct:    1 MREGEMKEGETGLERKRMERKEEEMQEEEKEIVPAFESTIQEEEKVTGRESEERGTREEEVEAKREDKAARATERRRACDRGKRKFGDTRVEEEWLMTKSIEKLRRLDQREEDWEDSKDKPREGMLTRGIKRRSSFGATGGGPSEGRKTPEKMRASKRDQCFVGGEKVENTSMMARNGNSHREEDDGGEESGGRNKRLWLRTTSERGDRDKKVKREKDHSQEEGRETAPSIDKTALGRMDEEVHHVTPGKGGGVKENQGRAAALWALTIEVHAWEQWEGACLKAPTPFGSPLIGW 295
[Close]
BLAST of EWM20766.1 vs. NCBI_GenBank
Match: gi|553192167|ref|XP_005855526.1| (hypothetical protein NGA_0609300, partial [Nannochloropsis gaditana CCMP526] >gi|422293538|gb|EKU20838.1| hypothetical protein NGA_0609300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 529.25 bits (1362), Expect = 0.000e+0
Identity = 271/272 (99.63%), Postives = 271/272 (99.63%), Query Frame = 0 
Query:    1 MREGEMKEGETGLERKRMERKEEEMQEEEKEIVPAFESTIQEEEKVTGRESEERGTREEEVEAKREDKAARATERRRACDRGKRKFGDTRVEEEWLMTKSIEKLRRLDQREEDWEDSKDKPREGMLTRGIKRRSSFGATGGGPSEGRKTPEKMRASKRDQCFVGGEKVENTSMMARNGNSHREEDDGGEESGGRNKRLWLRTTSERGDRDKKVKREKDHSQEEGRETAPSIDKTALGRMDEEVHHVTPGKGGGVKENQGRAAALWALTIEVH 272
            MREGEMKEGETGLERKRMERKEEEMQEEEKEIVPAFES IQEEEKVTGRESEERGTREEEVEAKREDKAARATERRRACDRGKRKFGDTRVEEEWLMTKSIEKLRRLDQREEDWEDSKDKPREGMLTRGIKRRSSFGATGGGPSEGRKTPEKMRASKRDQCFVGGEKVENTSMMARNGNSHREEDDGGEESGGRNKRLWLRTTSERGDRDKKVKREKDHSQEEGRETAPSIDKTALGRMDEEVHHVTPGKGGGVKENQGRAAALWALTIEVH
Sbjct:   81 MREGEMKEGETGLERKRMERKEEEMQEEEKEIVPAFESMIQEEEKVTGRESEERGTREEEVEAKREDKAARATERRRACDRGKRKFGDTRVEEEWLMTKSIEKLRRLDQREEDWEDSKDKPREGMLTRGIKRRSSFGATGGGPSEGRKTPEKMRASKRDQCFVGGEKVENTSMMARNGNSHREEDDGGEESGGRNKRLWLRTTSERGDRDKKVKREKDHSQEEGRETAPSIDKTALGRMDEEVHHVTPGKGGGVKENQGRAAALWALTIEVH 352
The following BLAST results are available for this feature:
BLAST of EWM20766.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585100645|gb|EWM20766.1|0.000e+0100.00hypothetical protein Naga_100356g4 [Nannochloropsi... [more]
gi|553192167|ref|XP_005855526.1|0.000e+099.63hypothetical protein NGA_0609300, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9937rna9937Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications