EWM20769.1, cds9902 (CDS) Nannochloropsis gaditana

Overview
NameEWM20769.1
Unique Namecds9902
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037258.1:22914..22938 +
Alignment locationKK037258.1:23132..23185 +
Alignment locationKK037258.1:23317..23450 +
Alignment locationKK037258.1:23625..23735 +
Alignment locationKK037258.1:24042..24167 +
Alignment locationKK037258.1:24377..24502 +
Alignment locationKK037258.1:24649..24768 +
Alignment locationKK037258.1:24946..25324 +
Alignment locationKK037258.1:25469..25641 +
Alignment locationKK037258.1:25788..25817 +
Alignment locationKK037258.1:25943..26027 +
Alignment locationKK037258.1:26189..26331 +
Alignment locationKK037258.1:26450..26692 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20769.1
Producthypoxia up-regulated 1
Orig transcript idgnl|cribi|Naga_100356g1.1466.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037258.1supercontigKK037258.1:22914..22938 +
KK037258.1supercontigKK037258.1:23132..23185 +
KK037258.1supercontigKK037258.1:23317..23450 +
KK037258.1supercontigKK037258.1:23625..23735 +
KK037258.1supercontigKK037258.1:24042..24167 +
KK037258.1supercontigKK037258.1:24377..24502 +
KK037258.1supercontigKK037258.1:24649..24768 +
KK037258.1supercontigKK037258.1:24946..25324 +
KK037258.1supercontigKK037258.1:25469..25641 +
KK037258.1supercontigKK037258.1:25788..25817 +
KK037258.1supercontigKK037258.1:25943..26027 +
KK037258.1supercontigKK037258.1:26189..26331 +
KK037258.1supercontigKK037258.1:26450..26692 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029047HSP70_peptide-bd
IPR029048HSP70_C
IPR013126Hsp_70_fam
Homology
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|585100648|gb|EWM20769.1| (hypoxia up-regulated 1 [Nannochloropsis gaditana])

HSP 1 Score: 1181.39 bits (3055), Expect = 0.000e+0
Identity = 582/582 (100.00%), Postives = 582/582 (100.00%), Query Frame = 0
Query:    1 MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEKVGPLPRPARALCQSMLFLVPLLTPLSSSFALASLAHAPRSPTSAASFLPSLPFFLDPSSA 582
            MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEKVGPLPRPARALCQSMLFLVPLLTPLSSSFALASLAHAPRSPTSAASFLPSLPFFLDPSSA
Sbjct:    1 MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEKVGPLPRPARALCQSMLFLVPLLTPLSSSFALASLAHAPRSPTSAASFLPSLPFFLDPSSA 582          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|585100647|gb|EWM20768.1| (hypoxia up-regulated 1 [Nannochloropsis gaditana])

HSP 1 Score: 1059.67 bits (2739), Expect = 0.000e+0
Identity = 522/522 (100.00%), Postives = 522/522 (100.00%), Query Frame = 0
Query:    1 MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
            MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK
Sbjct:    1 MHRLRTEARVHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|1072227524|gb|OEU12263.1| (HSP70-domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 257.684 bits (657), Expect = 1.004e-71
Identity = 171/513 (33.33%), Postives = 252/513 (49.12%), Query Frame = 0
Query:   10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
            +HDD+ LS H SR Q EELC DL +RA  P+   L  AN+TL++I A+E+IGGG+RVPKVQ  +   LG +EL MH+N DE+MA GA+FY ANIST+F+VR +G+ DI PF VG  LE+   +EEK  G              E E A   W ++ATIF    K+   +TI+F   +D+ ++L Y      P GA+  +  + + GVS   +E   K    PKV L FEL  S    L+KAEA ++E      E       T                               A + +E  + E E   E  AE + D     K D                    K   HRK L V  +Y G +++P +++  E  K  +A L   D+ +    +A+N LE+Y Y VKNK+++ EE ++ +ST+EQR  +       ++W++DEG   +    + +  ++   A  ++ R  E    AR AA++A  + + E+      W   +  +TEEEK
Sbjct:  342 LHDDLSLSMHFSRTQFEELCDDLTKRATDPIIDALASANVTLEEITAIELIGGGMRVPKVQSSLSTVLGDMELGMHINSDESMALGASFYGANISTAFRVRQVGLVDISPFAVGVTLEDLETDEEKKSG--------------EDEDA---WGKKATIFKANGKIGVKKTIAFTHDQDVHVSLDYSDPEKLPIGAKAELQRYKVSGVSAFAKEMEEKGLGKPKVSLQFELSQSGTTALIKAEAAVEETYTVEVEVEIDDEET-------------------------------AASFNETNEKETENKTEGSAESQND---TSKEDISEKEEEPKKKKTKLVNQEKKK-THRKSLDVEIYYVG-KIQPLSKDLIEEYKLNIAELALLDKGRILLEEAKNKLESYFYSVKNKLIDDEENVAKISTEEQREELRKLSMEAEEWLFDEGDTADVETIQSKYDELATPAEMVWFRLKEMT--ARPAAVKALNERLVEIEEKFTNWVTNLTHITEEEK 799          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|1210521493|dbj|GAX19483.1| (hypoxia up-regulated 1 [Fistulifera solaris])

HSP 1 Score: 219.164 bits (557), Expect = 5.634e-58
Identity = 163/519 (31.41%), Postives = 254/519 (48.94%), Query Frame = 0
Query:   10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTY----EASALFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEA--EEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
            +H+D  L  H++RA+LE L A L +RAVQP    L++AN T+ D+ AVE+IGGG+RVP +Q  ++  LG  EL +H+N DE+MA GAAF  AN ST+F+VR IG+ D+ PF     L +  P+               KK +E        W+++ T+F    KL   +TI+F    D    L Y    E   L P G + ++  + I G+++   +   K +  PKV L FEL AS + HLVKAEA ++E    + E + V                                A+NA +  +E        K+AE   E  K  E  K  +                    K  + ++ L VT+  +G +++P T E  E+S+ KLAAL   D+L+  + + RN LE+Y+Y++KN + +  E +  V+T+EQ    +    A  +WM D+G   + +  +++ T V      I  R  E    AR AA+ A  K + ++  L++ W+ + P +TE E+
Sbjct:  339 LHNDAPLQQHMTRAELETLAAPLIQRAVQPALDCLKRANKTIADLTAVELIGGGMRVPAIQSGLQAALGVEELGLHMNSDESMALGAAFAGANHSTAFRVRHIGLVDVCPFAYQVTLTDLNPD---------------KKADE--------WKKQTTMFKSFGKLGIKKTITFTHEADCLCQLDYAEDAEHVGLLPEGTERSLVEYSITGIADFATKMKEKGA--PKVSLQFELTASGIAHLVKAEASVEE-TYMAQEEIEVDDEEAATEEEAAEPAKDK--------------AENAASGKDEASESTSENKDAEKADETDKKTEDDKNKEKSKDKKPKAKPKKRITVEKEKTRIIKETLTVTARNKG-KVQPLTPELMEASRAKLAALAEKDKLRILREETRNKLESYIYKIKNTIQDV-EGIKEVATEEQLQECMDLALAAQEWMDDDGYGADIASMEQKYTTVSDPFEKILFRYKEKE--ARPAAVAALQKQLTDIEKLMENWSTSKPQVTEAER 813          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|1210524770|dbj|GAX16478.1| (hypoxia up-regulated 1 [Fistulifera solaris])

HSP 1 Score: 216.083 bits (549), Expect = 7.300e-57
Identity = 160/527 (30.36%), Postives = 258/527 (48.96%), Query Frame = 0
Query:   10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKVRPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASA----LFPPGAQPTIALFDIRGVSELVREHGTKTSYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPA----------PPKPIVHRKILRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEEK 522
            +H+D  L  H++RA+LE L A L +RAVQP    LQ+AN T+ D+ AVE+IGGG+RVP +Q  ++  LG  EL +H+N DE+MA GAAF  AN ST+F+VR IG+ D+ PF     L++  P+               KK +E        W+++ T+F    KL   +TI+F    D    L Y   A    L P G + ++  + I G+++   +   K +  PK+ L FEL AS + HLVKAEA ++E    + E + V       +      P   +                      E+D   +    A   E KDA+   + D +     +   S    P             K  + ++ L VT+  +G +++P + E  E+S+ KLAAL   D+L+  + + RN LE+Y+Y++KN  ++  E +  V+T++Q    +    A  +WM D+G   + +  +++ T +      I  R  E    AR AA+ A  K + ++  L++ W+ + P +TE E+
Sbjct:  339 LHNDAPLQQHMTRAELENLAAPLIQRAVQPALDCLQRANKTIADLTAVELIGGGMRVPAIQSGLQAALGLEELGLHMNSDESMALGAAFAGANHSTAFRVRHIGLVDVCPFAYQVTLKDLNPD---------------KKSDE--------WKKQTTMFKSFGKLGIKKTITFTHEADCLCQLDYSEDAEHVGLLPEGTERSLVEYSITGIADFATKMKDKGA--PKISLQFELTASGIAHLVKAEASVEE-TYMAQEEIEVDD-EEATTEEEAAEPAKDKA---------------------EDDAADKDEASASTSENKDADRADETDKKTDEEKSKEKSKDKKPKAKPKKRITVEKEKTRIIKETLTVTARNKG-KVQPLSPELLEASRAKLAALAEKDKLRILREETRNKLESYIYKIKN-TIQDVEGIKEVATEDQLQECMDLALAAQEWMDDDGYGADIATMEKKYTTLSDPFEKIMFRYKEKE--ARPAAVAALQKQLTDIEKLMENWSTSKPQVTEAER 813          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|923642451|ref|XP_013641724.1| (PREDICTED: heat shock 70 kDa protein 17-like [Brassica napus])

HSP 1 Score: 209.92 bits (533), Expect = 7.306e-55
Identity = 155/524 (29.58%), Postives = 252/524 (48.09%), Query Frame = 0
Query:   10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPG-AQPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAP------PKPIVHRKILRVTSHYEGLRLRPGTEEEKES---SKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEE 521
            +HDD D  + +SR + EELC DL+ER++ PL  VL+ + L + DI AVE+IGG  RVPK+Q  +++ +G  +L  HL+ DEA+  G+A +AAN+S   K+ R +G++D  P+G    LE                 G   KK+E  +Q          +     KL S    SF   KD  ++L YE+  + PPG   P  A + + G+++   ++ ++  S P K  L F L  S ++ L + +A ++           ++    VP        ++  T   +          +  APS+E   E +   +A+AE                   N+++SNTT   P       +  + ++  RV        + PG    KES   +K KL AL   D+ +R  A+ +N+LE+Y+Y  K K+     E   +ST E+R A + +++   DW+Y +G D  A+ ++ER   ++A+  PI LR  E    AR  A+E A K + EV+ ++K W     WL +E+
Sbjct:  325 LHDDRDFRSTISREKFEELCKDLWERSLTPLKDVLKHSGLKIDDIYAVELIGGATRVPKLQSTIQEFIGKQDLDKHLDADEAIVLGSALHAANLSDGIKLKRRLGISDGSPYGFLVELE-----------------GPNVKKDESTKQ---------QLVPRMKKLPSKMFRSFVLDKDFDVSLAYESEDILPPGITSPVFAQYSVSGLADATEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIE-----------ITEWVEVPKKNVTVDNNTTSTTGNA----------STGAPSDENLQENKEELQADAE-------------------NSSASNTTTEEPAVVDLGTEKKLKKRTFRVPLKVVEKTVGPGAPFTKESLAEAKIKLEALDKKDKERRRTAELKNNLESYIYATKEKL--ETPEFEKISTQEERKAFVEKLDEVQDWLYMDGEDANATEFQERLDSLKAIGSPISLRSDELT--ARPVAVEYAQKYLTEVKEIIKEWETNKTWLPKEK 778          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|923929884|ref|XP_013733730.1| (PREDICTED: heat shock 70 kDa protein 17 isoform X1 [Brassica napus])

HSP 1 Score: 206.068 bits (523), Expect = 6.767e-54
Identity = 155/524 (29.58%), Postives = 251/524 (47.90%), Query Frame = 0
Query:   10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPG-AQPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAP------PKPIVHRKILRVTSHYEGLRLRPGTEEEKES---SKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEE 521
            +HDD D  + +SR + EELC DL+ER++ PL  VL+ + L + DI AVE+IGG  RVPK+Q  +++ +G  +L  HL+ DEA+  G+A +AAN+S   K+ R +G++D  P+G    LE                 G   KK+E  +Q          +     KL S    SF   KD  ++L YE+  + PPG   P  A + + G+++   ++ ++  S P K  L F L  S ++ L + +A ++           ++    VP        ++  T   +          +  APS+E   E +   +A+AE                   N+++SNTT   P       +  + ++  RV        + PG    KES   +K KL AL   D+ +R  A+ +N+LE+Y+Y  K K+     E   VST E+R A + ++    DW+Y +G D  A+ +++R   ++A+  PI LR  E    AR  A+E A K + EV+ ++K W     WL +E+
Sbjct:  325 LHDDRDFRSTISREKFEELCKDLWERSLTPLKDVLKHSGLKIDDIYAVELIGGATRVPKLQSTIQEFIGKQDLDKHLDADEAIVLGSALHAANLSDGIKLKRRLGISDGSPYGFLVELE-----------------GPNVKKDESTKQ---------QLVPRMKKLPSKMFRSFVLDKDFDVSLAYESEDILPPGITSPVFAQYSVSGLADATEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIE-----------ITEWVEVPKKNVTVDNNTTSTTGNA----------STGAPSDENLQENKEELQADAE-------------------NSSASNTTTEEPAVVDLGTEKKLKKRTFRVPLKVVEKTVGPGAPFTKESLAEAKIKLEALDKKDRERRRTAELKNNLESYVYATKEKL--ETPEFEKVSTQEERKAFVEKLGEVQDWLYMDGEDANATEFQDRLDSLKAIGSPISLRSEELT--ARPVAVEYAQKYLTEVKEIIKEWETNKTWLPKEK 778          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|1079355617|ref|XP_009145637.2| (PREDICTED: heat shock 70 kDa protein 17 isoform X1 [Brassica rapa])

HSP 1 Score: 206.068 bits (523), Expect = 7.923e-54
Identity = 155/524 (29.58%), Postives = 250/524 (47.71%), Query Frame = 0
Query:   10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPG-AQPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAP------PKPIVHRKILRVTSHYEGLRLRPGTEEEKES---SKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWLTEEE 521
            +HDD D  + +SR + EELC DL+ER++ PL  VL+ + L + DI AVE+IGG  RVPK+Q  +++ +G  +L  HL+ DEA+  G+A +AAN+S   K+ R +G+ D  P+G    LE                 G   KK+E  +Q          +     KL S    SF   KD  ++L YE+  + PPG   P  A + + G+++   ++ ++  S P K  L F L  S ++ L + +A ++           ++    VP        ++  T   +          +  APS+E   E +   +A+AE                   N+++SNTT   P       +  + ++  RV        + PG    KES   +K KL AL   D+ +R  A+ +N+LE+Y+Y  K K+     E   VST E+R A + ++    DW+Y +G D  A+ +++R   ++A+  PI LR  E    AR  A+E A K + EV+ ++K W     WL +E+
Sbjct:  325 LHDDRDFRSTISREKFEELCKDLWERSLTPLKDVLKHSGLKIDDIYAVELIGGATRVPKLQSTIQEFIGKQDLDKHLDADEAIVLGSALHAANLSDGIKLKRRLGIIDGSPYGFLVELE-----------------GPNVKKDESTKQ---------QLVPRMKKLPSKMFRSFVLDKDFDVSLAYESEDILPPGITSPVFAQYSVSGLADATEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIE-----------ITEWVEVPKKNVTVDNNTTSTTGNA----------STGAPSDENLQENKEELQADAE-------------------NSSASNTTTEEPAVVDLGTEKKLKKRTFRVPLKVVEKTVGPGAPFTKESLAEAKIKLEALDKKDRERRRTAELKNNLESYVYATKGKL--ETPEFEKVSTQEERKAFVEKLGEVQDWLYMDGEDANATEFQDRLDSLKAIGSPISLRSEELT--ARPVAVEYAQKYLTEVKEIIKEWETNKTWLPKEK 778          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|923924476|ref|XP_013731308.1| (PREDICTED: heat shock 70 kDa protein 17-like [Brassica napus])

HSP 1 Score: 205.682 bits (522), Expect = 2.009e-53
Identity = 153/520 (29.42%), Postives = 247/520 (47.50%), Query Frame = 0
Query:   10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPG-AQPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAP------PKPIVHRKILRVTSHYEGLRLRPG---TEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWL 517
            +HDD D  + +SR + EELC DL+ER++ PL  VL+ + L + DI AVE+IGG  RVPK+Q  +++ +G  +L  HL+ DEA+  G+A YAAN+S   K+ R +G+ D  P+G    LE                 G   KK+E  +Q          +     KL S    SF   KD  ++L Y++  + PPG   P  A + + G +    ++ ++  S P K  L F L  S ++ L + +A ++           ++    VP        ++  T   +          +  APS+E   E +   +A+AE                   N+++SNTT   P       +  + ++  RV        + PG   T+E  +++K KL AL   D+ +R  A+ +N+LE+Y+Y  K K+     E   VST E+R A + +++   DW+Y +G D  A+ + +R   ++A+  PI LR  E    AR  A+E A K + EV+ ++K W     WL
Sbjct:  325 LHDDRDFRSTISREKFEELCKDLWERSLTPLKDVLKHSGLKIDDIYAVELIGGATRVPKLQSTIQEFIGKQDLDKHLDADEAIVLGSALYAANLSDGIKLKRRLGIVDGSPYGFLVELE-----------------GPNVKKDESTKQ---------QLVPRMKKLPSKMFRSFVLDKDFDVSLAYDSEDILPPGITSPVFAQYSVSGFAVATEKYSSRNLSAPIKANLHFSLSRSGILSLDRGDAVIE-----------ITEWVEVPKKNVTVDNNTTSTTGNA----------STGAPSDENLHENKEELQADAE-------------------NSSASNTTTEEPAVVDLGTEKKLKKRTFRVPLKVVEKTVGPGAPFTKESLDAAKIKLEALDKKDRERRRTAELKNNLESYVYATKEKL--ETPEFEKVSTQEERKAFVEKLDEVQDWLYMDGEDANATEFLDRLDSLKAIGSPISLRSEELT--ARPVAVEYAQKYLTEVKEIIKEWETNKTWL 774          
BLAST of EWM20769.1 vs. NCBI_GenBank
Match: gi|658013960|ref|XP_008342291.1| (PREDICTED: heat shock 70 kDa protein 17-like [Malus domestica])

HSP 1 Score: 205.682 bits (522), Expect = 2.210e-53
Identity = 156/519 (30.06%), Postives = 246/519 (47.40%), Query Frame = 0
Query:   10 VHDDIDLSTHLSRAQLEELCADLFERAVQPLDSVLQQANLTLKDIAAVEVIGGGVRVPKVQQVVKDRLGSLELSMHLNGDEAMAQGAAFYAANISTSFKV-RPIGVTDILPFGVGARLEEAVPEEEKGGGGFLGALGLKKKKEEEKEQATEKWQRRATIFAPGHKLRSNRTISFNTSKDIALNLTYEASALFPPGA-QPTIALFDIRGVSELVREHGTKT-SYPPKVFLTFELDASALVHLVKAEARLQEDAPPSSEAVGVSPLTGVPSIPPHCRPHSPRTHPRSPFLLPFALAQNADAPSEEEDGEGEGGKEAEAEEKKDAETVKKVDGQNATAGNTTSSNTTAPAPPKPIVHRKI--------LRVTSHYEGLRLRPGTEEEKESSKQKLAALRANDQLKREKADARNSLEAYLYEVKNKMMEHEEELSLVSTDEQRSAVLAQVEATDDWMYDEGRDVEASVYKERTTQVRALAVPIFLRQAEGPGGARAAALEAAVKNVAEVRALVKRWNVTMPWL 517
            ++DD D  + ++R + EELC DL+E+++ PL  VL+ + L + +I AVE+IGG  RVPK+Q  +++ LG  EL  HL+ DEA   GAA YAAN+S   K+ R +G+ D   +G    L+          G  L           +KE +T     R T+     KL S    SF  SKD  + L YE+  L PPGA  P  A + +  ++E   ++ ++  S P K  L F L  S ++ L +A+A ++           VS    VP      + +S    P        +    A   S+E +G  + G                        GN+ SSN+T       ++ +K+        L++     G  + P  E   E +K+KL  L   D  +R  A+ +N+LE Y+Y +K K  E  +E   VST E+R + + +++   +W+Y +G D  AS ++ER   ++A+  PIF R  E    AR  A+E A K + EV+ +++ W    PW+
Sbjct:  329 LYDDRDFRSTITREKFEELCEDLWEKSLXPLKEVLKHSGLKVDEIYAVELIGGATRVPKLQAKLQEYLGRKELDRHLDADEATVLGAALYAANLSDGIKLNRKLGMIDGSTYGFVLELD----------GPDL-----------QKEDST-----RQTLVQRMKKLPSKMFRSFIQSKDFEVTLAYESEDLLPPGATSPVFAQYSVSSLTETSEKYASRNLSSPIKASLHFSLSRSGVLSLDRADAFIE-----------VSEWVEVPKKNLTTQENSTNVAPN------ISTETGAQNTSKESNGNTDDG------------------------GNSNSSNSTVETD--VVIEKKLKKRTFRIPLKIVEKTVGPAMSPSKESLAE-AKRKLEELDKKDAERRRTAELKNTLEGYIYGIKEK-FETSKEYEKVSTSEERQSFIGKLDEVQEWLYTDGEDATASEFQERLDVLKAIGDPIFFRLKELT--ARPEAVEHARKYLVEVQQILRGWESNKPWV 774          
The following BLAST results are available for this feature:
BLAST of EWM20769.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100648|gb|EWM20769.1|0.000e+0100.00hypoxia up-regulated 1 [Nannochloropsis gaditana][more]
gi|585100647|gb|EWM20768.1|0.000e+0100.00hypoxia up-regulated 1 [Nannochloropsis gaditana][more]
gi|1072227524|gb|OEU12263.1|1.004e-7133.33HSP70-domain-containing protein [Fragilariopsis cy... [more]
gi|1210521493|dbj|GAX19483.1|5.634e-5831.41hypoxia up-regulated 1 [Fistulifera solaris][more]
gi|1210524770|dbj|GAX16478.1|7.300e-5730.36hypoxia up-regulated 1 [Fistulifera solaris][more]
gi|923642451|ref|XP_013641724.1|7.306e-5529.58PREDICTED: heat shock 70 kDa protein 17-like [Bras... [more]
gi|923929884|ref|XP_013733730.1|6.767e-5429.58PREDICTED: heat shock 70 kDa protein 17 isoform X1... [more]
gi|1079355617|ref|XP_009145637.2|7.923e-5429.58PREDICTED: heat shock 70 kDa protein 17 isoform X1... [more]
gi|923924476|ref|XP_013731308.1|2.009e-5329.42PREDICTED: heat shock 70 kDa protein 17-like [Bras... [more]
gi|658013960|ref|XP_008342291.1|2.210e-5330.06PREDICTED: heat shock 70 kDa protein 17-like [Malu... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9933rna9933Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications