EWM20774.1, cds9901 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|585100654|gb|EWM20774.1| (hypoxia up-regulated 1 [Nannochloropsis gaditana]) HSP 1 Score: 723.005 bits (1865), Expect = 0.000e+0 Identity = 354/354 (100.00%), Postives = 354/354 (100.00%), Query Frame = 0
Query: 1 MLPSPQEPLADSKLALVRSGSPLIPPSLWLDTRRFNTDKSTTSIIRVNMGAAAMIGGGRRNLRVTFTLLLLSFLASGALAGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSVALLGEAYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVYEQPTNIIFYNLGASSLQVSLVEMSSYVTGRGSNEKRFAHFTVRAKVGSKRRERGRKGFPDAMPEGCLSEYGRRNRSRAFPIGLLIHVV 354
MLPSPQEPLADSKLALVRSGSPLIPPSLWLDTRRFNTDKSTTSIIRVNMGAAAMIGGGRRNLRVTFTLLLLSFLASGALAGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSVALLGEAYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVYEQPTNIIFYNLGASSLQVSLVEMSSYVTGRGSNEKRFAHFTVRAKVGSKRRERGRKGFPDAMPEGCLSEYGRRNRSRAFPIGLLIHVV
Sbjct: 1 MLPSPQEPLADSKLALVRSGSPLIPPSLWLDTRRFNTDKSTTSIIRVNMGAAAMIGGGRRNLRVTFTLLLLSFLASGALAGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSVALLGEAYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVYEQPTNIIFYNLGASSLQVSLVEMSSYVTGRGSNEKRFAHFTVRAKVGSKRRERGRKGFPDAMPEGCLSEYGRRNRSRAFPIGLLIHVV 354
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|676391991|ref|XP_009039273.1| (hypothetical protein AURANDRAFT_38247 [Aureococcus anophagefferens] >gi|323450133|gb|EGB06016.1| hypothetical protein AURANDRAFT_38247 [Aureococcus anophagefferens]) HSP 1 Score: 238.039 bits (606), Expect = 9.563e-68 Identity = 122/236 (51.69%), Postives = 163/236 (69.07%), Query Frame = 0
Query: 83 IGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSVA-LLGEAYFPTKVSYNESAGGLAI---------HHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVYEQPTNIIFYNLGASSLQVSLVEMSSYVTGRGSNEKRFAHFTV 308
+G+D G+EFMKV+LV+PG ++IVTN SKRKTET ++F +GER +G+DAY +L+R+P+ YARL LGR D HP+V LL ++Y PT V +N + G LA+ + ++ EELVAMILS+AKDIT+AYGG VRD V+ VP+F TQ ER+ALL AAE+ADM++L LI+ NTAAAL F +D YE+ I+FYN G+ S+Q SLVE S++ G K F V
Sbjct: 1 MGIDFGTEFMKVALVQPGAPLEIVTNHVSKRKTETSVAFVRGERLFGSDAYGMLSRKPEQAYARLTEFLGRSDSHPAVTTLLRKSYLPTTVRFNATRGALALGAPASTTQEYGGTWTEWTPEELVAMILSYAKDITRAYGGNVVRDCVITVPTFATQLEREALLVAAELADMRVLSLIEANTAAALQFGLDRKYEETKVILFYNAGSESVQASLVEYSTFPDKGGGKNKTVGQFEV 236
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|667482083|gb|AIG55617.1| (secreted protein, partial [Thraustotheca clavata]) HSP 1 Score: 220.32 bits (560), Expect = 9.237e-66 Identity = 116/251 (46.22%), Postives = 164/251 (65.34%), Query Frame = 0
Query: 66 FTLLLLSFLASGALAGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSVALLGE-AYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVYEQ---PTNIIFYNLGASSLQVSLVEMSSYVTGRG-SNEKRFAHFTVRAK 311
+ L+LL+ + A V GVD G EF K++LVKPG +IVTN+HSKRKTET++SF ER YGADA ++ RRP V Y+++ LG DHP V+ L E YFP ++ N + G +A+ H++E F +EEL AM+ HA+ IT + PV+D V+ VP ++ +P+RQA++DAAEIA +++L LIDENTAAAL VD V + P I+ +N+G++SLQVS+VE ++ V G K F V +K
Sbjct: 3 WILVLLAAILGTVAASVAGVDFGGEFFKIALVKPGRPFEIVTNVHSKRKTETIVSFNGEERVYGADAMNIEVRRPQVAYSQIRRFLGTSMDHPMVSSLTENEYFPYTLTQNLTRGSVALKHNNEHVFLAEELAAMVFGHARQITNDFAEGPVKDWVITVPMYFAEPQRQAIIDAAEIAGVRVLSLIDENTAAALHHGVDYVGLENGAPERIMLFNMGSTSLQVSIVEYTTRVVPDGFKKNKTIVEFEVLSK 253
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|224007537|ref|XP_002292728.1| (heat shock protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220971590|gb|EED89924.1| heat shock protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 229.565 bits (584), Expect = 1.095e-64 Identity = 117/231 (50.65%), Postives = 164/231 (71.00%), Query Frame = 0
Query: 81 GVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSVALLGEAYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYG-GIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVYEQPTNIIFYNLGASSLQVSLVEMSSY--VTGRGSNEKRFAHFTV 308
++GVDLGS +MKV+LV+ + ++IVTN+HSKRKTE M+ F G R YGADA SL+ R+P +T +++ +LGR +HPSV +L E ++ YNE+ G+ + D F+ EELVAM+L+HAKDIT+AYG PV+D VL VP+FYTQ ER+ALLDAAE+A++ +L LI+EN+AAAL F +D + +P +FYN+GA S+QVS+V+ +SY + S EK F V
Sbjct: 23 AILGVDLGSLYMKVALVQRNSPLEIVTNLHSKRKTEQMVLFDAGSRFYGADASSLMARKPHLTPSQMSVMLGRDAEHPSVQVLKERHYQFTPKYNETRSGICLTIDGN-EFTPEELVAMVLTHAKDITQAYGVTTPVKDCVLTVPNFYTQHERRALLDAAELAELNVLALINENSAAALHFGIDRIDAEPQTYLFYNMGAGSVQVSVVKYTSYGRKESKYSKEKTVGAFEV 252
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|675211403|ref|XP_008914586.1| (hypothetical protein PPTG_18280 [Phytophthora parasitica INRA-310] >gi|568085199|gb|ETN00111.1| hypothetical protein PPTG_18280 [Phytophthora parasitica INRA-310]) HSP 1 Score: 217.624 bits (553), Expect = 3.960e-64 Identity = 112/228 (49.12%), Postives = 156/228 (68.42%), Query Frame = 0
Query: 80 AGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSV-ALLGEAYFPTKVSYNESAGG-LAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVY---EQPTNIIFYNLGASSLQVSLVEMSSYVTGRGSNEKR 302
A V GVD G EF KV+LVKPGT +IVTN+HSKRKTETM++F ER YGADA ++ RRP YA++ LLG P V +LL E +FP ++ N + GG +++ H + +F +EELVAM+ +HA+ IT + V+D VL VP+F++Q +RQA+LDAAEI+ +++L LI+ENTAAAL V Y ++P I+FYN+G++SLQVS+ E SS V G + +
Sbjct: 24 AIVAGVDFGGEFFKVALVKPGTPFEIVTNVHSKRKTETMVAFDGDERLYGADAATVGVRRPQTAYAQIRRLLGTTLSDPQVSSLLDEEHFPYELVQNATRGGTISLKHGKDQTFHAEELVAMVFAHARQITDTFAEAAVKDWVLTVPAFFSQAQRQAMLDAAEISGVRVLSLINENTAAALQLAVHASYDPEDKPKKILFYNMGSTSLQVSIAEFSSQVVPDGFKKNK 251
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|219129229|ref|XP_002184797.1| (protein heat shock protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217403906|gb|EEC43856.1| protein heat shock protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 225.713 bits (574), Expect = 5.408e-63 Identity = 119/236 (50.42%), Postives = 164/236 (69.49%), Query Frame = 0
Query: 67 TLLLLSFLAS--GALAG--VIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSVALLGEAYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYGG------IPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVYEQPTNIIFYNLGASSLQVSLVEMSSY 292
+ L + LAS G + G ++GVDLGS +MKV+LV+ G+ ++IVTN+H+KRKTE MI F Q +R YGADA +LL R+ T + + LLGR + HP+V +L E ++P + YNE+ G+ + D F+ EELVAM+LSHA DI+ AY P +D +L VPS+ TQPERQALLDAA +A++ +LGLIDENTA+AL + +D +E P IIFYN+GAS+LQVSL+ +Y
Sbjct: 14 SFCLWTCLASFSGTVEGRAILGVDLGSLYMKVALVQSGSPLEIVTNLHAKRKTEQMILFDQQQRFYGADASALLARKSTKTPSAMSVLLGRDEQHPTVRVLAERHYPVRPVYNETRAGVTLTVDG-VEFTPEELVAMVLSHAVDISVAYATEQGSTIAPPKDVMLTVPSYATQPERQALLDAAGLAELNVLGLIDENTASALHYAMDKSFETPQLIIFYNMGASALQVSLIRFFNY 248
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|669140066|ref|XP_008605601.1| (hypothetical protein SDRG_01828 [Saprolegnia diclina VS20] >gi|530742515|gb|EQC40757.1| hypothetical protein SDRG_01828 [Saprolegnia diclina VS20]) HSP 1 Score: 222.631 bits (566), Expect = 4.337e-62 Identity = 117/239 (48.95%), Postives = 155/239 (64.85%), Query Frame = 0
Query: 80 AGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSVALLGE-AYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVYE-----QPTNIIFYNLGASSLQVSLVEMSSYVTGRG-SNEKRFAHFTVRAK 311
A V GVD G EF K++LVKPG +IVTN+HSKRKTET++SF ER YGADA ++ RRP V Y+++ LG DHP V+ L E YFP ++ N + G +A+ H E +F +EEL AM+ HAK IT + PV+D V+ VP ++ +P+RQA++DAAEIA +++L LIDENTAAAL VD YE P I+ YN+G++SLQVS+VE + V G K F V AK
Sbjct: 20 ASVAGVDFGGEFFKIALVKPGRPFEIVTNVHSKRKTETIVSFNGDERVYGADAMNIEVRRPQVAYSQIRRFLGATVDHPLVSSLTENEYFPYTLTKNLTRGSVALQHSSEHTFHAEELAAMVFGHAKQITNDFAEAPVKDWVITVPMYFAEPQRQAIIDAAEIAGIRVLSLIDENTAAALHHAVD--YEAAEPNTPERIMLYNMGSTSLQVSIVEYKTRVVPDGFKKNKTIVEFDVLAK 256
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|673017744|ref|XP_008862833.1| (hypothetical protein H310_01496 [Aphanomyces invadans] >gi|574482036|gb|ETW09028.1| hypothetical protein H310_01496 [Aphanomyces invadans]) HSP 1 Score: 222.246 bits (565), Expect = 7.608e-62 Identity = 108/222 (48.65%), Postives = 157/222 (70.72%), Query Frame = 0
Query: 80 AGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSV-ALLGEAYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAAL---LFVVDNVYEQPTNIIFYNLGASSLQVSLVEMSSYVTGRG 297
+ + GVD G EF K++LVKPG +IVTN+HSKRKTET++SF ER +GADA ++ RRP + Y+++ LLG HP V +++ YFP +++N++ G +A+ HDD+ +F +EELVAM+ +HAK IT + PVRD V+ VPS++ + +RQA++DAAEIA +++L LIDENTAAAL L + +PT ++ YN+G++SLQVSLVE SS + G
Sbjct: 25 SNLAGVDFGGEFFKIALVKPGKQFEIVTNVHSKRKTETIVSFNGEERLFGADAMNIEVRRPQMAYSQIRRLLGTTVTHPVVESMVKSEYFPYTLTHNDTRGSVALKHDDQFTFHAEELVAMVFTHAKTITNEFAESPVRDWVVTVPSYFVEAQRQAVIDAAEIAGIRVLSLIDENTAAALQHALAIETPQAGKPTRVLLYNMGSTSLQVSLVEYSSRIVPDG 246
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|673017736|ref|XP_008862829.1| (hypothetical protein H310_01493 [Aphanomyces invadans] >gi|574482032|gb|ETW09024.1| hypothetical protein H310_01493 [Aphanomyces invadans]) HSP 1 Score: 221.861 bits (564), Expect = 1.054e-61 Identity = 108/222 (48.65%), Postives = 157/222 (70.72%), Query Frame = 0
Query: 80 AGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSV-ALLGEAYFPTKVSYNESAGGLAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAAL---LFVVDNVYEQPTNIIFYNLGASSLQVSLVEMSSYVTGRG 297
+ + GVD G EF K++LVKPG +IVTN+HSKRKTET++SF ER +GADA ++ RRP + Y+++ LLG HP V +++ YFP +++N++ G +A+ HDD+ +F +EELVAM+ +HAK IT + PVRD V+ VPS++ + +RQA++DAAEIA +++L LIDENTAAAL L + +PT ++ YN+G++SLQVSLVE SS + G
Sbjct: 25 SNLAGVDFGGEFFKIALVKPGKQFEIVTNVHSKRKTETIVSFNGEERLFGADAMNIEVRRPQMAYSQIRRLLGTTVTHPVVESMVKSEYFPYTLTHNDTRGSVALKHDDQFTFHAEELVAMVFTHAKTITNEFAESPVRDWVVTVPSYFVEAQRQAVIDAAEIAGIRVLSLIDENTAAALQHALAIETPQAGKPTRVLLYNMGSTSLQVSLVEYSSRIVPDG 246
BLAST of EWM20774.1 vs. NCBI_GenBank
Match: gi|301097870|ref|XP_002898029.1| (hsp70-like protein [Phytophthora infestans T30-4] >gi|262106474|gb|EEY64526.1| hsp70-like protein [Phytophthora infestans T30-4]) HSP 1 Score: 219.935 bits (559), Expect = 4.361e-61 Identity = 112/223 (50.22%), Postives = 155/223 (69.51%), Query Frame = 0
Query: 80 AGVIGVDLGSEFMKVSLVKPGTMMDIVTNIHSKRKTETMISFYQGERSYGADAYSLLTRRPDVTYARLPTLLGRHDDHPSV-ALLGEAYFPTKVSYNESAGG-LAIHHDDEASFSSEELVAMILSHAKDITKAYGGIPVRDAVLVVPSFYTQPERQALLDAAEIADMKILGLIDENTAAALLFVVDNVY---EQPTNIIFYNLGASSLQVSLVEMSSYVTGRG 297
A V GVD G EF KV+LVKPGT +IVTN+HSKRKTETM++F ER YGADA ++ RRP YA++ LLG P V +LL E +FP ++ N + GG +++ H E ++ +EELVAM+ +HA+ IT + PV+D VL VP+F++Q +RQA+LDAAEI+ +++L LI+ENTAAAL V Y ++P I+F+N+G++SLQVS+ E SS V G
Sbjct: 24 AIVAGVDFGGEFFKVALVKPGTPFEIVTNVHSKRKTETMVAFDGDERLYGADAATVGVRRPQTAYAQIRRLLGTTLSDPQVSSLLDEEHFPYELIQNATRGGTISLKHGKEQTYHAEELVAMVFTHARQITDTFAEAPVKDWVLTVPTFFSQAQRQAMLDAAEISGVRVLSLINENTAAALQLAVHASYDPEDKPKKILFFNMGSTSLQVSIAEFSSQVVPDG 246 The following BLAST results are available for this feature:
BLAST of EWM20774.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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