EWM20796.1, cds9877 (CDS) Nannochloropsis gaditana

Overview
NameEWM20796.1
Unique Namecds9877
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037257.1:103443..103448 -
Alignment locationKK037257.1:102903..103088 -
Alignment locationKK037257.1:102378..102512 -
Alignment locationKK037257.1:102104..102260 -
Alignment locationKK037257.1:101589..101866 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20796.1
Productxanthine phosphoribosyltransferase
Orig transcript idgnl|cribi|Naga_100342g3.382.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:103443..103448 -
KK037257.1supercontigKK037257.1:102903..103088 -
KK037257.1supercontigKK037257.1:102378..102512 -
KK037257.1supercontigKK037257.1:102104..102260 -
KK037257.1supercontigKK037257.1:101589..101866 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0009116nucleoside metabolic process
GO:0043101purine-containing compound salvage
GO:0046110xanthine metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016763transferase activity, transferring pentosyl groups
Vocabulary: INTERPRO
TermDefinition
IPR029057PRTase-like
IPR000836PRibTrfase_dom
IPR010079Xanthine_PRibTrfase
Homology
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|585100687|gb|EWM20796.1| (xanthine phosphoribosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 513.072 bits (1320), Expect = 0.000e+0
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query:    1 MEVEFMLDSSEDKKRATENILRQTREASRVDVHKEEDHLWSLASGKLCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISESYQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELLIKALKEGKEDDEKGREEEIRIVCLANVVALDGEEGGEIRLGGGKKS 253
            MEVEFMLDSSEDKKRATENILRQTREASRVDVHKEEDHLWSLASGKLCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISESYQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELLIKALKEGKEDDEKGREEEIRIVCLANVVALDGEEGGEIRLGGGKKS
Sbjct:    1 MEVEFMLDSSEDKKRATENILRQTREASRVDVHKEEDHLWSLASGKLCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISESYQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELLIKALKEGKEDDEKGREEEIRIVCLANVVALDGEEGGEIRLGGGKKS 253          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|873240514|emb|CEL93365.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 177.948 bits (450), Expect = 4.404e-52
Identity = 99/195 (50.77%), Postives = 130/195 (66.67%), Query Frame = 0
Query:   46 KLCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITIS--ESYQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELLIKALKEGKEDDEKGREEEIRIVCLANVVALD 238
            +L ++I +DG  L   ILKVNSFINH+VD  L+D CG ALAD F     T +LTAQTSGV PAQA A +L  P +FARE KPIT+S     +++SRS+T+  D+ L+ A EF+  +D++LIVDDFLASGTTA AL  + +QAGA  +G GFLVEK F+ GR+ + K + E          +  R+V LA V +LD
Sbjct:    3 ELQKRILQDGVVLSSNILKVNSFINHQVDPLLMDSCGKALADHFTQYGPTKVLTAQTSGVAPAQATAFHLGVPYVFARESKPITLSGHSVLEARSRSYTKNKDIVLYAAAEFIQSNDKILIVDDFLASGTTAEALHSMCKQAGAEVIGMGFLVEKNFQGGRQTIHKDIPEF---------DMSRVVSLAIVGSLD 188          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|470400194|ref|XP_004335479.1| (xanthine phosphoribosyltransferase [Acanthamoeba castellanii str. Neff] >gi|440792238|gb|ELR13466.1| xanthine phosphoribosyltransferase [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 162.155 bits (409), Expect = 3.325e-46
Identity = 95/201 (47.26%), Postives = 125/201 (62.19%), Query Frame = 0
Query:   46 KLCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFARE-KKPITISESYQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELLIKALKEGKEDDEKGREEEIRIVCLANVVALDGEEGGEI 245
            +L ++I KDG+NLG+GILKV+ FINH +D  L+  C   LAD FK   VT ILT +TSGV P+      L  P+I+ R  K+PIT+     ++S SHT+   VSLFV++E++   D VL++DDFLASGTT  AL++++ QAGA  +G G LVEK FE GRELL K               E+ IV LA    +DG EG  I
Sbjct:    4 QLRDRIAKDGRNLGRGILKVDGFINHMIDPVLMRSCAGELADRFKGMGVTKILTVETSGVAPSLMTGLELGCPVIYCRSGKRPITMDHFLTTESVSHTKGGSVSLFVSQEYLKAEDNVLLIDDFLASGTTIRALMNLIEQAGAKLVGIGALVEKSFEGGRELLSKL-------------TEVPIVSLA---VIDGMEGDAI 188          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|1142748297|ref|WP_076995690.1| (xanthine phosphoribosyltransferase [Streptococcus azizii] >gi|1141493257|gb|ONK28618.1| xanthine phosphoribosyltransferase [Streptococcus azizii] >gi|1141493959|gb|ONK29313.1| xanthine phosphoribosyltransferase [Streptococcus azizii] >gi|1141494958|gb|ONK30303.1| xanthine phosphoribosyltransferase [Streptococcus azizii])

HSP 1 Score: 160.229 bits (404), Expect = 1.703e-45
Identity = 76/165 (46.06%), Postives = 117/165 (70.91%), Query Frame = 0
Query:   47 LCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISES-YQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELLIKA 210
            L E+I KDG+ LG+ ILKV+SF+ H+VD GL+   G  LAD ++++++T ++T + SG+ PA   A  LE PM+FA++ K IT++E    S+  S T+++  ++ +A +F+ P DR+LIVDDFLA+G  A  L+DI++QAGA  +G G ++EK F+ GR+LLI A
Sbjct:    4 LEERIVKDGQVLGENILKVDSFLTHQVDFGLMKEMGQVLADAYRSKNITKVVTIEASGIAPAVYVAESLEVPMVFAKKHKNITMTEGILTSEVYSFTKQVTSTVSIANKFLSPEDRILIVDDFLANGQAAKGLIDIIQQAGAQVVGVGIIIEKSFQDGRQLLIDA 168          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|934107173|gb|KPL79928.1| (xanthine phosphoribosyltransferase [Ornatilinea apprima])

HSP 1 Score: 159.458 bits (402), Expect = 2.439e-45
Identity = 79/162 (48.77%), Postives = 111/162 (68.52%), Query Frame = 0
Query:   47 LCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISES-YQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELL 207
            L ++I  DGK LG GILKV+ FINH+VD  L+D CG  LA+CFK+   T +LTA+ SG+ PA   ARYL  P+++AR+ KP+T+  + Y + + SHT+   V L V+ E++   ++VLI+DDFLASG T + L+ +V  AG   +G G L+EK FEKGR +L
Sbjct:    4 LKDRILSDGKYLGNGILKVDGFINHQVDPVLMDACGKELAECFKDSGATRVLTAEISGIAPAIMAARYLNLPVVYARKTKPVTMPNTVYLTIAPSHTKGRMVELIVSPEYLPRGEKVLIIDDFLASGETILGLVRLVEAAGCELVGVGTLIEKTFEKGRTML 165          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|937553427|dbj|GAP19351.1| (xanthine phosphoribosyltransferase [Levilinea saccharolytica])

HSP 1 Score: 159.458 bits (402), Expect = 2.901e-45
Identity = 81/162 (50.00%), Postives = 110/162 (67.90%), Query Frame = 0
Query:   47 LCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISES-YQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELL 207
            L ++I +DGKNLG GILKV+ FINH+VD  L+D CG   A  F     T +LTA+ SG+ PA   ARYL  P+++AR+ KPIT+  + Y + + SHT+   V L V+ E++   ++VLI+DDFLASG+T   L+ +V+ AGA  +G G LVEK FE GRELL
Sbjct:    5 LKDRILRDGKNLGGGILKVDGFINHQVDPVLMDACGQEFARLFAGVGATRVLTAEISGIAPAVMAARYLNLPVVYARKSKPITMPNTVYLTVAPSHTKGHMVELIVSPEYLPRGEKVLIIDDFLASGSTIQGLVRLVQAAGADLVGIGTLVEKSFEGGRELL 166          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|1011525681|ref|WP_062419652.1| (xanthine phosphoribosyltransferase [Levilinea saccharolytica] >gi|934108243|gb|KPL80971.1| xanthine phosphoribosyltransferase [Levilinea saccharolytica])

HSP 1 Score: 159.458 bits (402), Expect = 3.103e-45
Identity = 81/162 (50.00%), Postives = 110/162 (67.90%), Query Frame = 0
Query:   47 LCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISES-YQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELL 207
            L ++I +DGKNLG GILKV+ FINH+VD  L+D CG   A  F     T +LTA+ SG+ PA   ARYL  P+++AR+ KPIT+  + Y + + SHT+   V L V+ E++   ++VLI+DDFLASG+T   L+ +V+ AGA  +G G LVEK FE GRELL
Sbjct:    4 LKDRILRDGKNLGGGILKVDGFINHQVDPVLMDACGQEFARLFAGVGATRVLTAEISGIAPAVMAARYLNLPVVYARKSKPITMPNTVYLTVAPSHTKGHMVELIVSPEYLPRGEKVLIIDDFLASGSTIQGLVRLVQAAGADLVGIGTLVEKSFEGGRELL 165          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|1084519378|gb|OGN81335.1| (xanthine phosphoribosyltransferase [Chloroflexi bacterium GWB2_54_36])

HSP 1 Score: 158.303 bits (399), Expect = 8.697e-45
Identity = 80/162 (49.38%), Postives = 111/162 (68.52%), Query Frame = 0
Query:   47 LCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISES-YQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELL 207
            L ++I KDGKNLG GILKV++FINH+VD  L+D CG  LA  F N   T ILTA+ SG+ PA     ++  P+++AR+ KPIT+ ++ Y + + SHTR   V L V+ EF+G  ++VLI+DDFLASG T + L+ +   AGA+ +G G L+EK FE GR+ L
Sbjct:    4 LKDRILKDGKNLGGGILKVDNFINHQVDAVLMDACGAELARRFANSGATRILTAEISGIAPAIMTGLHMGLPVVYARKSKPITMPDTVYLTVAPSHTRGRPVELIVSPEFLGRGEKVLIIDDFLASGATILGLIRLTEAAGASLVGVGALIEKTFEGGRDAL 165          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|1010953594|ref|WP_061912821.1| (xanthine phosphoribosyltransferase [Bellilinea caldifistulae] >gi|934103920|gb|KPL76746.1| xanthine phosphoribosyltransferase [Bellilinea caldifistulae] >gi|937443405|dbj|GAP08954.1| xanthine phosphoribosyltransferase [Bellilinea caldifistulae])

HSP 1 Score: 157.532 bits (397), Expect = 1.757e-44
Identity = 81/162 (50.00%), Postives = 112/162 (69.14%), Query Frame = 0
Query:   47 LCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITISES-YQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELL 207
            L E+I K+GKNLG GILKV+SFINH+VD  L+D CG  LA  F +   T +LTA+ SG+ PA   AR+L  P+++AR+ KPIT+ ++ Y + + SHTR   V L V+ E++   +RVLI+DDFLASG T + L+ + + AGA  +G G L+EK FE GR+ L
Sbjct:    4 LKERILKEGKNLGGGILKVDSFINHQVDPVLMDACGAELAKRFAHVGATRVLTAEISGIGPALMTARHLGVPVVYARKTKPITMPDTVYLTIAPSHTRGRPVELIVSPEYLASGERVLIIDDFLASGATILGLVRLTQAAGADVVGIGALIEKTFEGGRDAL 165          
BLAST of EWM20796.1 vs. NCBI_GenBank
Match: gi|936187704|ref|WP_054521955.1| (xanthine phosphoribosyltransferase [Thermanaerothrix daxensis] >gi|934109756|gb|KPL82463.1| xanthine phosphoribosyltransferase [Thermanaerothrix daxensis])

HSP 1 Score: 155.992 bits (393), Expect = 5.654e-44
Identity = 78/162 (48.15%), Postives = 113/162 (69.75%), Query Frame = 0
Query:   47 LCEQIKKDGKNLGKGILKVNSFINHRVDVGLVDLCGHALADCFKNRDVTLILTAQTSGVLPAQACARYLERPMIFAREKKPITI-SESYQSQSRSHTRRMDVSLFVAKEFMGPSDRVLIVDDFLASGTTAVALLDIVRQAGATCLGFGFLVEKEFEKGRELL 207
            L E+I ++GKNLG GILKV++FINH+VD  L+D CG  LA  F + + T +LTA+ SG+ PA   A +L  P+++AR+ KPIT+ ++ Y + + SHT+   V L V+ E++ P +RVLI+DDFLA+G T + L+ +   AGAT +G G L+EK FE GR+ L
Sbjct:    4 LKERILREGKNLGGGILKVDNFINHQVDPLLMDACGAELARRFAHVNPTRVLTAEISGIAPALTTAMHLGIPVVYARKSKPITMPNQVYLTIAPSHTKGQMVELIVSPEYLKPGERVLIIDDFLATGQTILGLVRLTEAAGATVVGIGTLIEKTFEGGRKAL 165          
The following BLAST results are available for this feature:
BLAST of EWM20796.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100687|gb|EWM20796.1|0.000e+0100.00xanthine phosphoribosyltransferase [Nannochloropsi... [more]
gi|873240514|emb|CEL93365.1|4.404e-5250.77unnamed protein product [Vitrella brassicaformis C... [more]
gi|470400194|ref|XP_004335479.1|3.325e-4647.26xanthine phosphoribosyltransferase [Acanthamoeba c... [more]
gi|1142748297|ref|WP_076995690.1|1.703e-4546.06xanthine phosphoribosyltransferase [Streptococcus ... [more]
gi|934107173|gb|KPL79928.1|2.439e-4548.77xanthine phosphoribosyltransferase [Ornatilinea ap... [more]
gi|937553427|dbj|GAP19351.1|2.901e-4550.00xanthine phosphoribosyltransferase [Levilinea sacc... [more]
gi|1011525681|ref|WP_062419652.1|3.103e-4550.00xanthine phosphoribosyltransferase [Levilinea sacc... [more]
gi|1084519378|gb|OGN81335.1|8.697e-4549.38xanthine phosphoribosyltransferase [Chloroflexi ba... [more]
gi|1010953594|ref|WP_061912821.1|1.757e-4450.00xanthine phosphoribosyltransferase [Bellilinea cal... [more]
gi|936187704|ref|WP_054521955.1|5.654e-4448.15xanthine phosphoribosyltransferase [Thermanaerothr... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9908rna9908Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications