EWM20806.1, cds9867 (CDS) Nannochloropsis gaditana

Overview
NameEWM20806.1
Unique Namecds9867
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037257.1:81362..81832 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20806.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101438g1.8323.mrna
GbkeyCDS
Noteencoded by transcript variant 2; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:81362..81832 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20806.1 vs. NCBI_GenBank
Match: gi|585100712|gb|EWM20805.1| (hypothetical protein Naga_101438g1 [Nannochloropsis gaditana] >gi|585100713|gb|EWM20806.1| hypothetical protein Naga_101438g1 [Nannochloropsis gaditana])

HSP 1 Score: 309.686 bits (792), Expect = 1.542e-106
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0 
Query:    1 MGRYPRIPCSNVLDVEHFHRGRRPRREGTNTGSLCVFCTRCFAVILLGNHRTPSPGRFSPPSSSSVVSRVLRDGRQDDSISHRLQDKEDQPHHRILPSPFLLRRLCIDPFDSVSRLILSSFPVVGHLATLSVTRTSDPMPSIISATILVSTRANKS 156
            MGRYPRIPCSNVLDVEHFHRGRRPRREGTNTGSLCVFCTRCFAVILLGNHRTPSPGRFSPPSSSSVVSRVLRDGRQDDSISHRLQDKEDQPHHRILPSPFLLRRLCIDPFDSVSRLILSSFPVVGHLATLSVTRTSDPMPSIISATILVSTRANKS
Sbjct:    1 MGRYPRIPCSNVLDVEHFHRGRRPRREGTNTGSLCVFCTRCFAVILLGNHRTPSPGRFSPPSSSSVVSRVLRDGRQDDSISHRLQDKEDQPHHRILPSPFLLRRLCIDPFDSVSRLILSSFPVVGHLATLSVTRTSDPMPSIISATILVSTRANKS 156
The following BLAST results are available for this feature:
BLAST of EWM20806.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100712|gb|EWM20805.1|1.542e-106100.00hypothetical protein Naga_101438g1 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9898rna9898Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications