EWM20811.1, cds9863 (CDS) Nannochloropsis gaditana

Overview
NameEWM20811.1
Unique Namecds9863
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037257.1:72554..73288 +

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Properties
Property NameValue
Protein idEWM20811.1
Productisochorismatase hydrolase
Orig transcript idgnl|cribi|Naga_101471g1.7265.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037257.1supercontigKK037257.1:72554..73288 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR000868Isochorismatase-like
Homology
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BLAST of EWM20811.1 vs. NCBI_GenBank
Match: gi|585100723|gb|EWM20811.1| (isochorismatase hydrolase [Nannochloropsis gaditana])

HSP 1 Score: 493.041 bits (1268), Expect = 2.533e-176
Identity = 244/244 (100.00%), Postives = 244/244 (100.00%), Query Frame = 0 
Query:    1 MPPIPSSAPSRTNTSSSLSIPAPLSGHVGREGLLVDLRNTILLLHPGDLPFPVIQNISLLRAAWGKPINACKNEGENGNAGDVFSSSPTVLIVQGGTVTADCDEGQLFQPQVPCPALSRFIDAEASVFHTTNLGYILARLFAAMSTSARPPSPPSRPLSLPPLHHLVIAGAKADTALESTVRDAADMGYIVTYVTDAVSGSSAQRETRTAYVREGGREAGREGGREGGREGGRKVSAETSGKPS 244
            MPPIPSSAPSRTNTSSSLSIPAPLSGHVGREGLLVDLRNTILLLHPGDLPFPVIQNISLLRAAWGKPINACKNEGENGNAGDVFSSSPTVLIVQGGTVTADCDEGQLFQPQVPCPALSRFIDAEASVFHTTNLGYILARLFAAMSTSARPPSPPSRPLSLPPLHHLVIAGAKADTALESTVRDAADMGYIVTYVTDAVSGSSAQRETRTAYVREGGREAGREGGREGGREGGRKVSAETSGKPS
Sbjct:    1 MPPIPSSAPSRTNTSSSLSIPAPLSGHVGREGLLVDLRNTILLLHPGDLPFPVIQNISLLRAAWGKPINACKNEGENGNAGDVFSSSPTVLIVQGGTVTADCDEGQLFQPQVPCPALSRFIDAEASVFHTTNLGYILARLFAAMSTSARPPSPPSRPLSLPPLHHLVIAGAKADTALESTVRDAADMGYIVTYVTDAVSGSSAQRETRTAYVREGGREAGREGGREGGREGGRKVSAETSGKPS 244
The following BLAST results are available for this feature:
BLAST of EWM20811.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100723|gb|EWM20811.1|2.533e-176100.00isochorismatase hydrolase [Nannochloropsis gaditan... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9894rna9894Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications