EWM20821.1, cds9854 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|585100742|gb|EWM20821.1| (glycolate oxidase [Nannochloropsis gaditana]) HSP 1 Score: 853.203 bits (2203), Expect = 0.000e+0 Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 0 Query: 1 MGDVKRQQAAAVEASIHQPLERLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALRQKGFLLDADRRAQRPRARPAGSQRGERGRRGIAASHCRTSTGGIESFGARAEWGDGVDGFLTEWLWTSMRWIPLRLGGIGILTERGRGKARSMACLLE 418 MGDVKRQQAAAVEASIHQPLERLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALRQKGFLLDADRRAQRPRARPAGSQRGERGRRGIAASHCRTSTGGIESFGARAEWGDGVDGFLTEWLWTSMRWIPLRLGGIGILTERGRGKARSMACLLE Sbjct: 1 MGDVKRQQAAAVEASIHQPLERLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALRQKGFLLDADRRAQRPRARPAGSQRGERGRRGIAASHCRTSTGGIESFGARAEWGDGVDGFLTEWLWTSMRWIPLRLGGIGILTERGRGKARSMACLLE 418
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|299117207|emb|CBN75171.1| (Glycolate Oxidase (2-Hydroxyacid Oxidase) [Ectocarpus siliculosus]) HSP 1 Score: 320.087 bits (819), Expect = 4.005e-103 Identity = 164/308 (53.25%), Postives = 207/308 (67.21%), Query Frame = 0 Query: 13 EASIHQPLERLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALR 320 E + L R +SLDD Q +A+ L KALYEYVASG+DDEQTL ENRQ FKR L PR+ VS +D+ L +F Q S+P+ +SPAGVH LMHP+GE AT RA +MGVSQHAT +EDVA AA P W+QLYIL+DR LT ++RR+E +GY A+ LTVDS FG READWRN F GLP G+ LANYPT+ Y+DR+K WDQN+E L D +++ D+ WL S+TSLP++VKGI+ +DAV+A EAG G+IVSNHGGR LD +SSIE+L + +A+R Sbjct: 5 EKKVPVDLSRCISLDDFQRQAKPILGKALYEYVASGTDDEQTLSENRQAFKRMFLLPRMMRVVSDIDLRLDVF-----GQRLSMPVFVSPAGVHKLMHPEGECATARACAEAGTLMGVSQHATVSLEDVAAAA-----------------PRCARWFQLYILKDRELTAGILRRSEKAGYTAICLTVDSVRFGSREADWRNNFNGLPPGVTLANYPTQDGYNDRVKDAWDQNTEKLFDERATWS-DIAWLKSLTSLPILVKGILTAQDAVSAVEAGASGVIVSNHGGRALDGSLSSIESLAPVVKAVR 289
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|553191822|ref|XP_005855463.1| (hydroxyacid oxidase, partial [Nannochloropsis gaditana CCMP526] >gi|422293592|gb|EKU20892.1| hydroxyacid oxidase, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 306.22 bits (783), Expect = 5.049e-98 Identity = 166/167 (99.40%), Postives = 166/167 (99.40%), Query Frame = 0 Query: 178 SLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALRQKGFLLDADRRAQRPRARPAGSQR 344 SLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTK AYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALRQKGFLLDADRRAQRPRARPAGSQR Sbjct: 48 SLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKRAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALRQKGFLLDADRRAQRPRARPAGSQR 214
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|219125915|ref|XP_002183215.1| (glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405490|gb|EEC45433.1| glycolate oxidase [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 246.514 bits (628), Expect = 1.930e-74 Identity = 139/306 (45.42%), Postives = 180/306 (58.82%), Query Frame = 0 Query: 22 RLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANY------PTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTS--LPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEAL 319 LL++DD Q A+ +LP +LYEY+ASG+ D TL ENR F R L PR V ++ + LF Q S+P+ SPAGVH L HPDGE AT R Q ++ G+SQHAT +E VA AA P + +YQ YIL+DRS+T LV+RA +GY + LTVDS FG+READ RNGF LP LANY Y+ + WDQNSE L +++ S+ +D+ WL LP++VKGI+ EDAV A EAG I+VSNHGGRQLD+C+ SI+ LP + A+ Sbjct: 9 NLLNVDDYQVLAKTKLPHSLYEYLASGTADATTLRENRDAFARWYLRPRAMRPVGRISTRMVLF-----GQGLSMPVFCSPAGVHALCHPDGECATARVCQDLGLLFGLSQHATKSIEQVAAAA-----------------PQSHRYYQAYILKDRSITARLVQRAIQAGYSGIFLTVDSVRFGYREADARNGFDALPSPHRLANYDEVRQQNLDQTYNAKTHLAWDQNSELLFEQNVSW-KDVTWLKEEVCGGLPLIVKGIMTAEDAVLAIEAGADAIMVSNHGGRQLDTCLGSIDVLPEVVMAV 291
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|1210523724|dbj|GAX17406.1| ((S)-2-hydroxy-acid oxidase [Fistulifera solaris]) HSP 1 Score: 242.276 bits (617), Expect = 1.467e-72 Identity = 137/329 (41.64%), Postives = 190/329 (57.75%), Query Frame = 0 Query: 18 QPLERLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGG------------WDQNSEALLDRSSSFERDLPWLCSVT--SLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEAL-RQKGFLLDADRR 331 + ++R + ++D Q A+K+LPK LY+Y++SG+DDEQTL ENR +KR L PRV + V + + S+P+ +SPAGV LMHPDGE A RA ++ ++ G+SQHAT +E+VA AA P +YQ YIL+DR T L+ RA +GYQ + LTVDS FG+R AD RNGF LP L +Y H DD M G WDQNSE LLD +S+ +D+ WL +P+++KGI+ EDA+ A +AG ++VSNHGGRQ+D C+++I+ LP +A A+ Q LD R Sbjct: 11 KTIDRPVCVNDFQLLAQKQLPKDLYDYLSSGADDEQTLNENRDAWKRWYLRPRVLRSLDAVIDTRVVLPWQQQRHTLSMPVFVSPAGVQALMHPDGECAVARACEKAGILYGLSQHATNSIEEVAAAA-----------------PQCLRYYQSYILKDREWTWRLIERALQAGYQGIFLTVDSVRFGYRPADARNGFNALPAPHRLVHYDDDHTQDDNMNSGKKAIYNGQTHSAWDQNSEQLLDTQTSW-KDVRWLRERLPPHIPLIIKGIMTQEDAIFAVQAGADAVMVSNHGGRQVDGCLAAIDVLPEVAAAVGHQVPIFLDGGVR 321
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|567974254|gb|ETL24852.1| (hypothetical protein L916_21215 [Phytophthora parasitica]) HSP 1 Score: 241.891 bits (616), Expect = 5.610e-72 Identity = 130/297 (43.77%), Postives = 189/297 (63.64%), Query Frame = 0 Query: 24 LSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPL-WYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEAL 319 L++ + + AR+ LPK+ +Y ASGSD +TL ENR+ FKR +L PRV DVSK+D+S TL P+ ++P+ H + HPDGEIA+ AA + +S +TT +EDVA A+ SA + L W+QLY+ +DR +T+ LVRRAE +GY+A++LTVD+PV G READ RN F+ +P+ + +AN+ ++A D D L D++ S+ +D+ WL S+T+LP+V KGI+ PEDAV A E+GC G++VSNHG RQLD ++I+ALP I +A+ Sbjct: 86 LNVLEFEENAREYLPKSTMDYFASGSDSMETLKENREAFKRLVLHPRVLRDVSKMDISTTLL-----GHRIRSPVCVAPSSTHRMAHPDGEIASTSAAAKADTCFVLSTMSTTTLEDVATAS--------------SAANTNALRWFQLYVFKDRKITVGLVRRAEKAGYKAIVLTVDAPVLGNREADVRNHFS-IPKRLTMANFGPQNATTDYADYVSD-----LYDQTLSW-KDVEWLKSITNLPIVAKGIITPEDAVMAVESGCEGVLVSNHGARQLDGVAATIDALPAIVQAV 356
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|970657263|gb|KUF95167.1| (Counting factor associated protein D [Phytophthora nicotianae]) HSP 1 Score: 238.424 bits (607), Expect = 6.332e-72 Identity = 128/297 (43.10%), Postives = 189/297 (63.64%), Query Frame = 0 Query: 24 LSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPL-WYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEAL 319 L++ + + AR+ LPK+ +Y ASGSD +TL ENR+ FKR +L PRV DVSK+D+S TL P+ ++P+ H + HPDGEIA+ AA + +S +TT +EDVA A+ SA + L W+QLY+ +DR +T+ LVRRAE +GY+A++LTVD+PV G READ RN F+ +P+ + +AN+ ++A D + L +++ S+ +D+ WL S+T+LP+V KGI+ PEDAV A E+GC G++VSNHG RQLD ++I+ALP I +A+ Sbjct: 12 LNVLEFEEYAREYLPKSTMDYFASGSDSMETLKENREAFKRLVLHPRVLRDVSKMDISTTLL-----GHRIRSPVCVAPSSTHRMAHPDGEIASTSAAAKADTCFVLSTMSTTTLEDVATAS--------------SAANTNALRWFQLYVFKDRKITVGLVRRAEKAGYKAIVLTVDAPVLGNREADVRNHFS-IPKRLTMANFGPQNATTD-----YADYVSDLYNQTLSW-KDVEWLKSITNLPIVAKGILTPEDAVMAVESGCEGVLVSNHGARQLDGVAATIDALPAIVQAV 282
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|570935570|gb|ETP00827.1| (hypothetical protein F441_21834 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 241.121 bits (614), Expect = 1.406e-71 Identity = 130/297 (43.77%), Postives = 189/297 (63.64%), Query Frame = 0 Query: 24 LSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPL-WYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEAL 319 L++ + + AR+ LPK+ +Y ASGSD +TL ENR+ FKR +L PRV DVSK+D+S TL P+ ++P+ H + HPDGEIA+ AA + +S +TT +EDVA A+ SA + L W+QLY+ +DR +T+ LVRRAE +GY+A++LTVD+PV G READ RN F+ +P+ + +AN+ ++A D D L D++ S+ +D+ WL S+T+LP+V KGI+ PEDAV A E+GC G++VSNHG RQLD ++I+ALP I +A+ Sbjct: 86 LNVLEFEEYAREYLPKSTMDYFASGSDSMETLKENREAFKRLVLHPRVLRDVSKMDISTTLL-----GHRIRSPVCVAPSSTHRMAHPDGEIASTSAAAKADTCFVLSTMSTTTLEDVATAS--------------SAANTNALRWFQLYVFKDRKITVGLVRRAEKAGYKAIVLTVDAPVLGNREADVRNHFS-IPKRLTMANFGPQNATTDYADYVSD-----LYDQTLSW-KDVEWLKSITNLPIVAKGIITPEDAVMAVESGCEGVLVSNHGARQLDGVAATIDALPAIVQAV 356
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|330794910|ref|XP_003285519.1| (hypothetical protein DICPUDRAFT_97074 [Dictyostelium purpureum] >gi|325084522|gb|EGC37948.1| hypothetical protein DICPUDRAFT_97074 [Dictyostelium purpureum]) HSP 1 Score: 239.195 bits (609), Expect = 1.435e-71 Identity = 123/305 (40.33%), Postives = 189/305 (61.97%), Query Frame = 0 Query: 18 QPLERLLSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALRQK 322 P++ +++ +++ EARK+LPK +Y+Y ASGS+D+ TL EN F R L PR V+VSKV ++ Q S PIMI+P + + HP+GE+ T+ AA+ IM +S +TT +EDV++ + P W+QLY+ +DR ++ LV+R E GY+AL++TVD+P G R+AD++N F LP G+ L N+ +H ++GG +Q ++D ++ +DL WL S+T+LPV+VKG++ P+DA A + G GIIVSNHGGRQLD+ S+IE LP I++ ++ K Sbjct: 25 NPMDAFVTVAEMKEEARKKLPKMVYDYYASGSNDQSTLAENENAFTRIKLVPRSLVNVSKVSTKTKIY-----GQDLSTPIMIAPWAMQRMAHPNGELDTLEAAKEFGTIMTLSSLSTTSVEDVSKHS-----------------NGNPGWFQLYVFKDRKVSEDLVKRVEKLGYKALVVTVDTPFLGKRDADYKNQFK-LPNGLFLKNF--EHLLLSNLEGGLNQYMATMIDPGLTW-KDLEWLRSITTLPVLVKGVMCPQDAAEALKHGADGIIVSNHGGRQLDTSPSTIEVLPAISKVVQGK 303
BLAST of EWM20821.1 vs. NCBI_GenBank
Match: gi|695458105|ref|XP_009537350.1| (hypothetical protein PHYSODRAFT_528753 [Phytophthora sojae] >gi|348667959|gb|EGZ07784.1| hypothetical protein PHYSODRAFT_528753 [Phytophthora sojae]) HSP 1 Score: 238.039 bits (606), Expect = 1.647e-71 Identity = 131/300 (43.67%), Postives = 186/300 (62.00%), Query Frame = 0 Query: 24 LSLDDVQAEARKRLPKALYEYVASGSDDEQTLWENRQGFKRHLLCPRVGVDVSKVDMSLTLFEDTDHAQHASLPIMISPAGVHCLMHPDGEIATVRAAQREQVIMGVSQHATTCMEDVARAAVTLPTPSPASSPPPSAPPSTPLWYQLYILRDRSLTLSLVRRAESSGYQALILTVDSPVFGFREADWRNGFAGLPEGMILANYPTKHAYDDRMKGGWDQNSEALLDRSSSFERDLPWLCSVTSLPVVVKGIVAPEDAVAAAEAGCHGIIVSNHGGRQLDSCISSIEALPGIAEALRQKG 323 L++ + + AR+ LPKA +Y ASGSD +TL ENR+ FKR +L PRV DVS ++ S TL + S P+ ++P+ H L HPDGEIA+ A + +S +TT +EDVA A+ A P+ W+QLY+ +DR++TL LVRRAE +GY+A++LTVD+PV G READ RN F+ +P + +AN+ ++A D D L D++ S++ D+ WL S+T LP+V KGI+ PEDAV A E+GC GI+VSNHG RQLD ++I+ALP I A+ + Sbjct: 13 LNVLEFEEYAREYLPKASMDYFASGSDSMETLQENREAFKRLVLHPRVLRDVSNMNTSTTLL-----GHNVSSPVCVAPSSTHRLAHPDGEIASSSATAKADTCFVLSTMSTTTLEDVAAAS-------------SKANPNALRWFQLYVFKDRAITLGLVRRAEEAGYKAIVLTVDAPVLGNREADVRNHFS-IPGHLTMANFGPQNATTDYADYVSD-----LYDQTLSWQ-DVKWLKSITKLPIVAKGILTPEDAVMAVESGCEGILVSNHGARQLDGVAATIDALPAIVRAVDDRA 287 The following BLAST results are available for this feature:
BLAST of EWM20821.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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