EWM20822.1, cds9849 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|585100744|gb|EWM20822.1| (glutamate 1-semialdehyde aminotransferase, partial [Nannochloropsis gaditana]) HSP 1 Score: 284.648 bits (727), Expect = 4.671e-97 Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0 Query: 1 PPSFPPSLRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVRQTPSCPSSFLSLVRAFSEEGSPPTVHLYQPAFEQLLSLLVFCLPPWHILVAPSLLLGLGLRFPPSPPTFDLPAARPVDAGSLSDPKPSLTLPP 146 PPSFPPSLRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVRQTPSCPSSFLSLVRAFSEEGSPPTVHLYQPAFEQLLSLLVFCLPPWHILVAPSLLLGLGLRFPPSPPTFDLPAARPVDAGSLSDPKPSLTLPP Sbjct: 1 PPSFPPSLRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVRQTPSCPSSFLSLVRAFSEEGSPPTVHLYQPAFEQLLSLLVFCLPPWHILVAPSLLLGLGLRFPPSPPTFDLPAARPVDAGSLSDPKPSLTLPP 146
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|1012113351|ref|XP_015960527.1| (glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic [Arachis duranensis]) HSP 1 Score: 78.9518 bits (193), Expect = 1.862e-16 Identity = 34/46 (73.91%), Postives = 39/46 (84.78%), Query Frame = 0 Query: 8 LRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVR 53 +R I++ GK AGHAICGGH+SGMFGFFFTEGPV FADA KSDT + Sbjct: 9 VRGIVEAGKKAGHAICGGHISGMFGFFFTEGPVYNFADAKKSDTAK 54
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|551558658|ref|XP_005766304.1| (glutamate 1-semialdehyde 2,1-aminomutase [Emiliania huxleyi CCMP1516] >gi|485616545|gb|EOD13875.1| glutamate 1-semialdehyde 2,1-aminomutase [Emiliania huxleyi CCMP1516]) HSP 1 Score: 84.3445 bits (207), Expect = 2.761e-16 Identity = 35/46 (76.09%), Postives = 41/46 (89.13%), Query Frame = 0 Query: 8 LRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVR 53 + IL GKAAGHA+CGGH+SGMFGFFFT+GPV+CFADAAKSDT + Sbjct: 366 INGILDAGKAAGHAVCGGHISGMFGFFFTDGPVKCFADAAKSDTAK 411
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|32307578|gb|AAP79194.1| (glutamate 1-semialdehyde 2,1-aminomutase [Bigelowiella natans]) HSP 1 Score: 80.1073 bits (196), Expect = 1.027e-14 Identity = 34/44 (77.27%), Postives = 39/44 (88.64%), Query Frame = 0 Query: 8 LRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDT 51 + IL+ GKAAGH++CGGH+SGMFGFFFTEGPV CFADA KSDT Sbjct: 416 INGILEAGKAAGHSLCGGHISGMFGFFFTEGPVNCFADATKSDT 459
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|1150087289|ref|XP_020229277.1| (glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic [Cajanus cajan] >gi|1012342372|gb|KYP53566.1| hypothetical protein KK1_024459 [Cajanus cajan]) HSP 1 Score: 78.1814 bits (191), Expect = 4.227e-14 Identity = 33/46 (71.74%), Postives = 39/46 (84.78%), Query Frame = 0 Query: 8 LRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVR 53 ++ I++ GK AGHAICGGH+SGMFGFFFTEGPV FADA KSDT + Sbjct: 376 IQGIIEAGKRAGHAICGGHISGMFGFFFTEGPVYNFADAKKSDTAK 421
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|145356284|ref|XP_001422363.1| (predicted protein [Ostreococcus lucimarinus CCE9901] >gi|144582605|gb|ABP00680.1| predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 78.1814 bits (191), Expect = 4.659e-14 Identity = 43/81 (53.09%), Postives = 49/81 (60.49%), Query Frame = 0 Query: 8 LRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVRQTPSCPSSFLSLVRAFSEEGSPPTVHLYQPAFEQL 88 + ILK GK GHA+CGGH+SGMFGFFFTEGPV+ FADAAKSDT + F RA EEG Y+ F L Sbjct: 376 IEGILKAGKDNGHAVCGGHISGMFGFFFTEGPVKNFADAAKSDTEK--------FGRWHRAMLEEGVYLAPSQYEAGFMSL 448
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|922854501|gb|KOO23030.1| (glutamate-1-semialdehyde -aminomutase [Chrysochromulina sp. CCMP291]) HSP 1 Score: 77.7962 bits (190), Expect = 6.027e-14 Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0 Query: 11 ILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDT 51 IL GKAAGHA+ GGH+SGMFGFFF EGPV+CFADAAKSDT Sbjct: 375 ILAAGKAAGHAVTGGHISGMFGFFFCEGPVKCFADAAKSDT 415
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|1199289777|gb|OUS44882.1| (pyridoxal phosphate-dependent transferase [Ostreococcus tauri]) HSP 1 Score: 77.0258 bits (188), Expect = 9.325e-14 Identity = 42/79 (53.16%), Postives = 49/79 (62.03%), Query Frame = 0 Query: 8 LRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVRQTPSCPSSFLSLVRAFSEEGSPPTVHLYQPAFE 86 + ILK G+ GHA+CGGH+SGMFGFFFTEGPV+ F DAAKSDT + F RA EEG V+L FE Sbjct: 364 IEGILKAGRDNGHAVCGGHISGMFGFFFTEGPVKNFTDAAKSDTAK--------FGRWHRAMLEEG----VYLAPSQFE 430
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|217074220|gb|ACJ85470.1| (unknown [Medicago truncatula]) HSP 1 Score: 74.3294 bits (181), Expect = 9.582e-14 Identity = 31/46 (67.39%), Postives = 38/46 (82.61%), Query Frame = 0 Query: 8 LRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVR 53 ++ I++ GK AGHAICGGH++GMFGFFFTEGPV F DA KSDT + Sbjct: 93 VQGIVEAGKRAGHAICGGHINGMFGFFFTEGPVYNFTDAKKSDTAK 138
BLAST of EWM20822.1 vs. NCBI_GenBank
Match: gi|693495993|emb|CEG00814.1| (Tetrapyrrole biosynthesis,glutamate-1-semialdehyde aminotransferase [Ostreococcus tauri]) HSP 1 Score: 77.0258 bits (188), Expect = 9.643e-14 Identity = 42/79 (53.16%), Postives = 49/79 (62.03%), Query Frame = 0 Query: 8 LRSILKEGKAAGHAICGGHVSGMFGFFFTEGPVRCFADAAKSDTVRQTPSCPSSFLSLVRAFSEEGSPPTVHLYQPAFE 86 + ILK G+ GHA+CGGH+SGMFGFFFTEGPV+ F DAAKSDT + F RA EEG V+L FE Sbjct: 367 IEGILKAGRDNGHAVCGGHISGMFGFFFTEGPVKNFTDAAKSDTAK--------FGRWHRAMLEEG----VYLAPSQFE 433 The following BLAST results are available for this feature:
BLAST of EWM20822.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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