EWM20832.1, cds9841 (CDS) Nannochloropsis gaditana | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	EWM20832.1
Unique Name	cds9841
Type	CDS
Organism	Nannochloropsis gaditana (N. gaditana B-31)
Alignment location	KK037257.1:22133..22153 +
Alignment location	KK037257.1:22372..22719 +
Alignment location	KK037257.1:22971..23015 +
Alignment location	KK037257.1:23167..23271 +
Alignment location	KK037257.1:23399..23470 +
Alignment location	KK037257.1:23668..23824 +
Alignment location	KK037257.1:24032..24057 +
Alignment location	KK037257.1:24162..24229 +
Alignment location	KK037257.1:24452..24544 +
Alignment location	KK037257.1:24772..24855 +
Alignment location	KK037257.1:25012..25056 +
Alignment location	KK037257.1:25243..25402 +
Alignment location	KK037257.1:25611..25754 +

Link to JBrowse

Properties


Property Name	Value
Protein id	EWM20832.1
Product	myosin light chain kinase
Orig transcript id	gnl\|cribi\|Naga_100524g1.10023.mrna
Gbkey	CDS

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
KK037257.1	supercontig	KK037257.1:22133..22153 +
KK037257.1	supercontig	KK037257.1:22372..22719 +
KK037257.1	supercontig	KK037257.1:22971..23015 +
KK037257.1	supercontig	KK037257.1:23167..23271 +
KK037257.1	supercontig	KK037257.1:23399..23470 +
KK037257.1	supercontig	KK037257.1:23668..23824 +
KK037257.1	supercontig	KK037257.1:24032..24057 +
KK037257.1	supercontig	KK037257.1:24162..24229 +
KK037257.1	supercontig	KK037257.1:24452..24544 +
KK037257.1	supercontig	KK037257.1:24772..24855 +
KK037257.1	supercontig	KK037257.1:25012..25056 +
KK037257.1	supercontig	KK037257.1:25243..25402 +
KK037257.1	supercontig	KK037257.1:25611..25754 +

Analyses

This CDS is derived from or has results from the following analyses


Analysis Name	Date Performed
GO annotation for N. gaditana B31	2020-04-08
BLAST analysis for N. gaditana B-31	2020-04-07
InterPro analysis for N. gaditana B-31	2020-04-06
Gene prediction for N. gaditana B-31	2014-02-18

Annotated Terms

The following terms have been associated with this CDS:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016301	kinase activity
GO:0005515	protein binding
GO:0000166	nucleotide binding
GO:0004672	protein kinase activity
GO:0004689	phosphorylase kinase activity
GO:0005516	calmodulin binding
GO:0005524	ATP binding

Vocabulary: **Biological Process**
Term	Definition
GO:0009058	biosynthetic process
GO:0006464	cellular protein modification process
GO:0006091	generation of precursor metabolites and energy
GO:0005975	carbohydrate metabolic process
GO:0005978	glycogen biosynthetic process
GO:0006468	protein phosphorylation

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0005737	cytoplasm
GO:0005964	phosphorylase kinase complex

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom
IPR008271	Ser/Thr_kinase_AS
IPR017441	Protein_kinase_ATP_BS
IPR020636	Ca/CaM-dep_Ca-dep_prot_Kinase
IPR000719	Prot_kinase_dom
IPR002290	Ser/Thr_dual-sp_kinase
IPR002291	Phosph_kin_gamma

Homology

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BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|585100757|gb|EWM20832.1| (myosin light chain kinase [Nannochloropsis gaditana])

HSP 1 Score: 951.044 bits (2457), Expect = 0.000e+0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0

Query:    1 MGNCIPTARLQSMSTKNHLRTRGHSSTISDASTATCSSVTSNPLASSSPSAPTRGHHPSLTPCQYAPVDVTNRAAVSLVRKKAKQSQGDEEGMKAGGSTAWKQWGLVRPRKERIETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKLLAVARERSLTRRESDCSASEEEGREKAKDLLPCLPVGLVQ 455
            MGNCIPTARLQSMSTKNHLRTRGHSSTISDASTATCSSVTSNPLASSSPSAPTRGHHPSLTPCQYAPVDVTNRAAVSLVRKKAKQSQGDEEGMKAGGSTAWKQWGLVRPRKERIETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKLLAVARERSLTRRESDCSASEEEGREKAKDLLPCLPVGLVQ
Sbjct:    1 MGNCIPTARLQSMSTKNHLRTRGHSSTISDASTATCSSVTSNPLASSSPSAPTRGHHPSLTPCQYAPVDVTNRAAVSLVRKKAKQSQGDEEGMKAGGSTAWKQWGLVRPRKERIETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKLLAVARERSLTRRESDCSASEEEGREKAKDLLPCLPVGLVQ 455

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|553186230|ref|XP_005854383.1| (calcium-dependent protein [Nannochloropsis gaditana CCMP526] >gi|422294677|gb|EKU21977.1| calcium-dependent protein [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 579.711 bits (1493), Expect = 0.000e+0
Identity = 294/363 (80.99%), Postives = 295/363 (81.27%), Query Frame = 0

Query:   93 MKAGGSTAWKQWGLVRPRKERIETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKLLAVARERSLTRRESDCSASEEEGREKAKDLLPCLPVGLVQ 455
            MKAGG+TAWKQWGL                                RDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLA                                  APEILRREPYGKPVDMWSIGVI FILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKLLAVARERSLTRRESDCSASEEEGREK KDLLPCLPVGLVQ
Sbjct:    1 MKAGGTTAWKQWGL--------------------------------RDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLA----------------------------------APEILRREPYGKPVDMWSIGVITFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKLLAVARERSLTRRESDCSASEEEGREKGKDLLPCLPVGLVQ 297

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|585102879|gb|EWM22378.1| (myosin light chain kinase [Nannochloropsis gaditana])

HSP 1 Score: 329.717 bits (844), Expect = 1.310e-106
Identity = 160/335 (47.76%), Postives = 219/335 (65.37%), Query Frame = 0

Query:  105 GLVRPRKERIETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVR-VNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKLLAVARERSLTRRESDCSASEEEG 438
            GL   +    +  Y +GK+LG G  AVV EC ++  G++ A+KI  ++KL+  D   + +EV+IL  +KH +V++  D  +D + YYLV E   GGELFDRI +K +Y EKEARDL ++L   + Y HS  VVHRDLKPENLLL DE DD  IK+ADFG+A R +  N+L +QCGTP YVAPEIL+  PYG+ VD+WS GVI +ILL GY PFYDE+  R+F KIK+  F+F    W+++S EA+DLI  LL VDP +RL  + AL H W++  D LL+ + L GT   +K+FNA+RKFR +  +VI+ ++L   +    L     D    +E G
Sbjct:   14 GLPPSKNLSFDKDYTLGKELGSGAYAVVYECTNKATGRKAAVKIVDRSKLSGEDDEALKQEVAILRDMKHGHVVQLFDFYKDRQKYYLVLEICLGGELFDRIVEKKSYNEKEARDLVRILFDTLRYCHSTKVVHRDLKPENLLLEDERDDANIKLADFGFAQRMLTPNSLTTQCGTPGYVAPEILKGIPYGEKVDVWSAGVITYILLGGYPPFYDENQGRMFRKIKRGDFKFHSPMWDHVSPEAKDLIKRLLVVDPHKRLDAAGALKHAWILTSDHLLQKRDLAGTVEEMKKFNAKRKFRGAAKAVILMHRLKGSSMSGKLDDSTGDGEGMDESG 348

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|1173945081|gb|OQR93750.1| (calcium/calmodulin-dependent protein kinase [Thraustotheca clavata])

HSP 1 Score: 326.635 bits (836), Expect = 3.378e-105
Identity = 157/304 (51.64%), Postives = 208/304 (68.42%), Query Frame = 0

Query:  112 ERIETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKL 415
            +R    Y +GKKLGEG  +VV+E   +  GK+YA+K   K  L   D+  + EE+SIL  + HPN++  +DV  ++  YYLVTE M GGELFDRI +K+ YTEKEARDL  +L++AI+Y H   VVHRDLKPENLLL  ++DD  IKIADFG+A +    +L + CGTP YVAPEIL+ E YGK VD+WSIGVI FILL GY PF+DE+ +RLFN IK   F+FE   W+++S EA+D IS +L V+PA+R T  Q L H W+   +  +    LT     LK++NARRKF+A+V +V + + L
Sbjct:   37 KRFNAVYTLGKKLGEGTFSVVKEGTHKETGKKYAIKCIKKQGLTQEDLDALHEEISILKKMDHPNIMTLYDVFSEQSDYYLVTEIMEGGELFDRIVEKTYYTEKEARDLVLILLNAIKYCHDRGVVHRDLKPENLLLTSKSDDAFIKIADFGFAKQDFSASLTTACGTPGYVAPEILKGESYGKTVDIWSIGVITFILLCGYPPFHDENQKRLFNAIKIGAFKFESPYWDSVSAEAKDFISKMLVVNPAERFTADQLLEHVWLTGTE--VSTVPLTQAMEQLKKYNARRKFKAAVRTVQVTSAL 338

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|224007138|ref|XP_002292529.1| (myosin light chain kinase [Thalassiosira pseudonana CCMP1335] >gi|220972171|gb|EED90504.1| myosin light chain kinase [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 325.094 bits (832), Expect = 4.666e-105
Identity = 158/303 (52.15%), Postives = 216/303 (71.29%), Query Frame = 0

Query:  118 YCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRV-NRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKLLAVA 419
            Y  GK LGEG  +VV E   +   + YA+K+ TK+KL   D   + +E+++L  LKH ++IR ++V E+  +YYLVTE M GGELFDRI  KS Y EKEARD+ K+L  +I + HS  V HRDLKPENLLL  E +D  IKIADFG+A +V   N+L +QCGTP YVAPEIL   PY    DMWS+GVII+ILL GY PF +++ R LF KI+K +++F E+ W ++S +A++LIS LL VDPA+RL+ S+AL H W++AD + L A+ L    A LK++NA+RKF+A+V++VI+ANKL ++ 
Sbjct:   35 YKRGKTLGEGAFSVVIEATKKDTDESYAVKVVTKSKLTKEDEVALKDEIAVLNELKHQHIIRLYEVFEEPSYYYLVTEQMRGGELFDRIVSKSYYNEKEARDVCKILFESIGFCHSKSVAHRDLKPENLLLRAEDNDSDIKIADFGFAKKVLTPNSLTTQCGTPGYVAPEILEGVPYDTKSDMWSLGVIIYILLGGYPPFIEQNQRELFRKIRKGQYEFHEEYWGSVSDDAKNLISSLLTVDPAKRLSASEALNHKWMVADGDKLAAQDLGTNLAELKKYNAKRKFKAAVNAVILANKLTSLG 337

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|1173951191|gb|OQR99104.1| (calcium/calmodulin-dependent protein kinase [Achlya hypogyna])

HSP 1 Score: 325.479 bits (833), Expect = 9.779e-105
Identity = 157/298 (52.68%), Postives = 204/298 (68.46%), Query Frame = 0

Query:  118 YCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKL 415
            Y +GKKLGEG  +VV+E   +  GK+YA+K   K  L   D+  + EE+SIL  ++HPN++  H+V  +  +YYLVTEYM GGELFDRI +K+ YTEKEARDL  +L++AI+Y H  +VVHRDLKPENLLL  ++DD  IKIADFG+A +    +L + CGTP YVAPEIL+ E YGK VD+WSIGVI FILL GY PF+DE+ +RLFN IK   F+FE   W+ +S EA+D IS +L VDP  R T  Q L H W+   +  +    LT     LK++NARRKF+A+V  V +   L
Sbjct:   39 YTLGKKLGEGTFSVVKEGTHKVTGKKYAIKCIKKQGLTQEDLDALHEEISILKKMEHPNIMTLHEVFSETAYYYLVTEYMEGGELFDRIVEKTYYTEKEARDLVLILLNAIKYCHDRNVVHRDLKPENLLLTSKSDDAFIKIADFGFAKQDMNASLTTACGTPGYVAPEILKGESYGKTVDIWSIGVITFILLCGYPPFHDENQKRLFNAIKVGSFKFESPYWDAVSAEAKDFISQMLVVDPTTRFTADQLLEHIWLTGTE--VSTVPLTQAMEQLKKYNARRKFKAAVRIVQVTTAL 334

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|673020696|ref|XP_008864309.1| (CAMK/CAMK1 protein kinase, variant 2 [Aphanomyces invadans] >gi|673020698|ref|XP_008864310.1| CAMK/CAMK1 protein kinase, variant 3 [Aphanomyces invadans] >gi|574479240|gb|ETW06234.1| CAMK/CAMK1 protein kinase, variant 2 [Aphanomyces invadans] >gi|574479241|gb|ETW06235.1| CAMK/CAMK1 protein kinase, variant 3 [Aphanomyces invadans])

HSP 1 Score: 326.635 bits (836), Expect = 1.766e-104
Identity = 152/302 (50.33%), Postives = 211/302 (69.87%), Query Frame = 0

Query:  108 RPRKERIETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSV 409
             P++   E +Y +GKKLGEG  +VV+E + +  GK++A+K   K+ L+  D+  + EE+ IL  ++HPN++   +V  + ++YYLVTE+M GGELFDRI +K+ YTEKEARDL +VL+ AI+Y H  +VVHRDLKPENLLL  + DD  IKI DFG+A +  +  L + CGTP YVAPEIL+ E YGK VD+WSIGVI FILL GY PF+DE+ +RLF  IK  +++F+   W+++S +A+D IS +L V+PA+R T  Q L H WV  DD  +    LT     LK++N RRKF+A+V +V
Sbjct:   81 EPQRHGFEANYTLGKKLGEGTFSVVKEGIQKATGKKFAIKCIKKSGLSQEDLDALHEEIDILKKMEHPNIMTLFEVYTEAQYYYLVTEFMEGGELFDRIVEKTFYTEKEARDLVQVLLGAIKYCHDQNVVHRDLKPENLLLTSKDDDAYIKIGDFGFAKQDMKAGLTTACGTPGYVAPEILKGESYGKSVDIWSIGVITFILLCGYPPFHDENQKRLFTAIKLGQYKFDSPYWDDVSADAKDFISKMLIVNPAERFTADQLLQHVWVTGDD--VSTVPLTKAMEELKKYNTRRKFKAAVRTV 380

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|397641675|gb|EJK74791.1| (hypothetical protein THAOC_03512 [Thalassiosira oceanica])

HSP 1 Score: 323.168 bits (827), Expect = 2.375e-104
Identity = 156/303 (51.49%), Postives = 212/303 (69.97%), Query Frame = 0

Query:  114 IETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVR-VNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSVIMANKL 415
             +  Y  GKKLGEG  +VV E   +  G  YA+K+ TK+KL   D   + +E+ +L  LKH ++IR +DV E++  +YLVTE M GGELFDRI  KS Y EKEARD+ K+L  AI Y HS  V HRDLKPENLLL  E +D ++KIADFG+A + +  N+L +QCGTP YVAPEIL    Y    DMWS+GVII+I+L GY PF +++ R LF KI++ +++F E+ W ++S +A+DLIS LLCV PA+RLT  +AL H W++AD + L  + L    + L+++NA+RKF+A+VH+VIM NKL
Sbjct:   31 FDGEYKRGKKLGEGAFSVVIEASKKDTGVSYAVKVVTKSKLTKEDEVALRDEIQVLNTLKHKHIIRLYDVFEEKDFWYLVTEKMTGGELFDRIVSKSFYNEKEARDVCKILFEAIGYCHSKSVAHRDLKPENLLLLSEDNDSEVKIADFGFAKKCLTPNSLTTQCGTPGYVAPEILEGVAYDTKSDMWSLGVIIYIILGGYPPFIEQNQRELFRKIRRGQYEFHEEYWGSVSDDAKDLISSLLCVQPAKRLTAEEALKHKWMVADAKDLEGQDLGTNLSELRKYNAKRKFKAAVHTVIMTNKL 333

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|673020694|ref|XP_008864308.1| (CAMK/CAMK1 protein kinase, variant 1 [Aphanomyces invadans] >gi|574479239|gb|ETW06233.1| CAMK/CAMK1 protein kinase, variant 1 [Aphanomyces invadans])

HSP 1 Score: 325.865 bits (834), Expect = 4.841e-104
Identity = 152/301 (50.50%), Postives = 211/301 (70.10%), Query Frame = 0

Query:  109 PRKERIETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNTLRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSV 409
            P++   E +Y +GKKLGEG  +VV+E + +  GK++A+K   K+ L+  D+  + EE+ IL  ++HPN++   +V  + ++YYLVTE+M GGELFDRI +K+ YTEKEARDL +VL+ AI+Y H  +VVHRDLKPENLLL  + DD  IKI DFG+A +  +  L + CGTP YVAPEIL+ E YGK VD+WSIGVI FILL GY PF+DE+ +RLF  IK  +++F+   W+++S +A+D IS +L V+PA+R T  Q L H WV  DD  +    LT     LK++N RRKF+A+V +V
Sbjct:   94 PQRHGFEANYTLGKKLGEGTFSVVKEGIQKATGKKFAIKCIKKSGLSQEDLDALHEEIDILKKMEHPNIMTLFEVYTEAQYYYLVTEFMEGGELFDRIVEKTFYTEKEARDLVQVLLGAIKYCHDQNVVHRDLKPENLLLTSKDDDAYIKIGDFGFAKQDMKAGLTTACGTPGYVAPEILKGESYGKSVDIWSIGVITFILLCGYPPFHDENQKRLFTAIKLGQYKFDSPYWDDVSADAKDFISKMLIVNPAERFTADQLLQHVWVTGDD--VSTVPLTKAMEELKKYNTRRKFKAAVRTV 392

[Close]

BLAST of EWM20832.1 vs. NCBI_GenBank
Match: gi|566028730|gb|ETI51641.1| (CAMK/CAMK1 protein kinase [Phytophthora parasitica P1569] >gi|567966111|gb|ETK91567.1| CAMK/CAMK1 protein kinase [Phytophthora parasitica] >gi|567994824|gb|ETL44973.1| CAMK/CAMK1 protein kinase [Phytophthora parasitica] >gi|568024090|gb|ETL98132.1| CAMK/CAMK1 protein kinase [Phytophthora parasitica] >gi|568054495|gb|ETM51274.1| CAMK/CAMK1 protein kinase [Phytophthora parasitica] >gi|570332448|gb|ETO80396.1| CAMK/CAMK1 protein kinase [Phytophthora parasitica P1976] >gi|570956430|gb|ETP21424.1| CAMK/CAMK1 protein kinase [Phytophthora parasitica CJ01A1] >gi|570991698|gb|ETP49377.1| CAMK/CAMK1 protein kinase [Phytophthora parasitica P10297])

HSP 1 Score: 323.168 bits (827), Expect = 9.181e-104
Identity = 155/298 (52.01%), Postives = 206/298 (69.13%), Query Frame = 0

Query:  114 IETHYCVGKKLGEGHTAVVRECVDRRDGKRYAMKIFTKAKLALLDVSGMLEEVSILWHLKHPNVIRFHDVLEDERHYYLVTEYMAGGELFDRITQKSTYTEKEARDLFKVLVSAIEYMHSMDVVHRDLKPENLLLADETDDVQIKIADFGYAVRVNRNT--LRSQCGTPCYVAPEILRREPYGKPVDMWSIGVIIFILLAGYAPFYDEDHRRLFNKIKKAKFQFEEDTWENISVEAQDLISGLLCVDPAQRLTPSQALAHPWVMADDELLRAKKLTGTQAALKRFNARRKFRASVHSV 409
             E  Y +GK +G G  +VVR  V +  G+RYA+K   +  L   D+  +  EV+IL  + HPN++  HD   +E+ YYLVTE+M GGELFDRI +KS Y E+EARDL K+L+ AI+Y H  ++VHRDLKPENLLL  + DD  IK+ADFG+A R+  ++  L + CGTP YVAPEIL  +PYGK VD+WSIGVI +ILL GY PF+D++H  LF KIKK KFQF+   W+++S +A+DLIS +L VDP +R T  Q LAH WV   +  +   +LT     L+RFNARRKF+A+V +V
Sbjct:   43 FEEQYALGKVIGSGTFSVVRIAVHKPTGQRYAIKCIKRDGLVAEDIEALTTEVAILKQMNHPNIMILHDFFVEEKFYYLVTEFMEGGELFDRIVEKSYYNEREARDLVKLLLEAIKYCHDANIVHRDLKPENLLLTSKDDDASIKLADFGFAKRIEFDSEGLVTACGTPGYVAPEILEGKPYGKTVDIWSIGVITYILLCGYPPFHDDNHNALFKKIKKGKFQFDSPYWDHVSDDAKDLISQMLVVDPEKRATVDQLLAHRWVTGTE--VATVQLTSALEELRRFNARRKFKAAVSTV 338

The following BLAST results are available for this feature:

BLAST of EWM20832.1 vs. NCBI_GenBank

BLAST of EWM20832.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10


Match Name	E-value	Identity	Description
gi\|585100757\|gb\|EWM20832.1\|	0.000e+0	100.00	myosin light chain kinase [Nannochloropsis gaditan...	[more]
gi\|553186230\|ref\|XP_005854383.1\|	0.000e+0	80.99	calcium-dependent protein [Nannochloropsis gaditan...	[more]
gi\|585102879\|gb\|EWM22378.1\|	1.310e-106	47.76	myosin light chain kinase [Nannochloropsis gaditan...	[more]
gi\|1173945081\|gb\|OQR93750.1\|	3.378e-105	51.64	calcium/calmodulin-dependent protein kinase [Thrau...	[more]
gi\|224007138\|ref\|XP_002292529.1\|	4.666e-105	52.15	myosin light chain kinase [Thalassiosira pseudonan...	[more]
gi\|1173951191\|gb\|OQR99104.1\|	9.779e-105	52.68	calcium/calmodulin-dependent protein kinase [Achly...	[more]
gi\|673020696\|ref\|XP_008864309.1\|	1.766e-104	50.33	CAMK/CAMK1 protein kinase, variant 2 [Aphanomyces ...	[more]
gi\|397641675\|gb\|EJK74791.1\|	2.375e-104	51.49	hypothetical protein THAOC_03512 [Thalassiosira oc...	[more]
gi\|673020694\|ref\|XP_008864308.1\|	4.841e-104	50.50	CAMK/CAMK1 protein kinase, variant 1 [Aphanomyces ...	[more]
gi\|566028730\|gb\|ETI51641.1\|	9.181e-104	52.01	CAMK/CAMK1 protein kinase [Phytophthora parasitica...	[more]

Relationships

This CDS is a part of the following mRNA feature(s):


Feature Name	Unique Name	Species	Type
rna9872	rna9872	Nannochloropsis gaditana (N. gaditana B-31)	mRNA

Sequences

Synonyms

Publications