EWM20851.1, cds9824 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|585100789|gb|EWM20851.1| (Cyclin-like protein [Nannochloropsis gaditana]) HSP 1 Score: 647.121 bits (1668), Expect = 0.000e+0 Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0 Query: 1 MKMGESNRSIKRHSVRLRSMQSAGTADVTHEGGKDPFESTLSPRSKTRRRQGSCAAFSRAFPPSVVLGAVLHLLLPSGARSLSSPEYPSFPPSSGSFPSSSAHEYISPSFPSPEPPLPQAGHHPPYLPPRPPPFALPSPPSPSGPIAAFLRTLPEKDPAEVASRCLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKEYPSSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQYKKLPVFRQESP 324 MKMGESNRSIKRHSVRLRSMQSAGTADVTHEGGKDPFESTLSPRSKTRRRQGSCAAFSRAFPPSVVLGAVLHLLLPSGARSLSSPEYPSFPPSSGSFPSSSAHEYISPSFPSPEPPLPQAGHHPPYLPPRPPPFALPSPPSPSGPIAAFLRTLPEKDPAEVASRCLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKEYPSSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQYKKLPVFRQESP Sbjct: 1 MKMGESNRSIKRHSVRLRSMQSAGTADVTHEGGKDPFESTLSPRSKTRRRQGSCAAFSRAFPPSVVLGAVLHLLLPSGARSLSSPEYPSFPPSSGSFPSSSAHEYISPSFPSPEPPLPQAGHHPPYLPPRPPPFALPSPPSPSGPIAAFLRTLPEKDPAEVASRCLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKEYPSSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQYKKLPVFRQESP 324
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|727147943|emb|CEG69725.1| (Putative Cyclin [Rhizopus microsporus]) HSP 1 Score: 91.2781 bits (225), Expect = 3.300e-18 Identity = 55/160 (34.38%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 158 PAEVASRCLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKEYP----SSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQY 313 P E+ + +A LL ++V N++L F + P + I YLSRI++ T S L++ LIY DRI+ + P +SLTVHRLL+ ++++A+K T D +S Y + G+P+ EL LE+E L + ++DL V + AYG + L + Sbjct: 14 PTELLVKIVADLLISIVKENDKLSNRSVTH------FHSRTVPPIGIYAYLSRILKFTSFSNEALLSTLIYFDRIAQHKGPNYAVNSLTVHRLLITSILVASKFTSD--VFYSNTRYAKVGGIPLCELNQLELEFLFLCKFDLHVKLENMQAYGDQLLTH 165
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|145494266|ref|XP_001433127.1| (hypothetical protein [Paramecium tetraurelia strain d4-2] >gi|124400244|emb|CAK65730.1| unnamed protein product [Paramecium tetraurelia]) HSP 1 Score: 89.3521 bits (220), Expect = 5.169e-18 Identity = 50/156 (32.05%), Postives = 80/156 (51.28%), Query Frame = 0 Query: 166 LAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKE---YPSSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQYKKLPV 318 +A +LD ++ + L+ ++ F + PS+SI YL RI + T S +C + ALIYLDR+ K +S +HR LL A+++A K+ D Y Y + GV V E+ ILE E L ++ + L + F Y K L+Y ++ + Sbjct: 11 VANILDEIIKETDTLEI----EQDSQSYFHANKAPSISIHNYLQRIAKYTHCSEQCFVIALIYLDRLQEKHPYLVLNSKCIHRFLLLAIVMAIKYQDDDYYKNEY--YAKVGGVSVKEIFILEQEFLELMDHQLFIDEQYYFLYEKKLLEYGEIEM 160
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|1178048605|gb|ORE04269.1| (cyclin-domain-containing protein [Rhizopus microsporus var. microsporus]) HSP 1 Score: 90.8929 bits (224), Expect = 5.512e-18 Identity = 54/160 (33.75%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 158 PAEVASRCLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKEYP----SSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQY 313 P ++ + +A LL ++V N++L F + P + I YLSRI++ T S L++ LIY DRI+ + P +SLTVHRLL+ ++++A+K T D +S Y + G+P+ EL LE+E L + ++DL V + AYG + L + Sbjct: 14 PTDLLVKIVADLLISIVKENDKLSNQSVTH------FHSRTVPPIGIYAYLSRILKFTSFSNEALLSTLIYFDRIAQHKGPNYAVNSLTVHRLLITSILVASKFTSD--VFYSNTRYAKVGGIPLCELNQLELEFLFLCKFDLHVKLENMQAYGDQLLTH 165
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|729709091|emb|CEI94479.1| (Putative Cyclin [Rhizopus microsporus]) HSP 1 Score: 91.6633 bits (226), Expect = 5.966e-18 Identity = 55/160 (34.38%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 158 PAEVASRCLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKEYP----SSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQY 313 P E+ + +A LL ++V N++L F + P + I YLSRI++ T S L++ LIY DRI+ + P +SLTVHRLL+ ++++A+K T D +S Y + G+P+ EL LE+E L + ++DL V + AYG + L + Sbjct: 48 PTELLVKIVADLLISIVKENDKLSNRSVTH------FHSRTVPPIGIYAYLSRILKFTSFSNEALLSTLIYFDRIAQHKGPNYAVNSLTVHRLLITSILVASKFTSD--VFYSNTRYAKVGGIPLCELNQLELEFLFLCKFDLHVKLENMQAYGDQLLTH 199
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|168064171|ref|XP_001784038.1| (predicted protein [Physcomitrella patens] >gi|162664424|gb|EDQ51144.1| predicted protein, partial [Physcomitrella patens]) HSP 1 Score: 87.8113 bits (216), Expect = 1.984e-17 Identity = 52/136 (38.24%), Postives = 76/136 (55.88%), Query Frame = 0 Query: 166 LAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKE---YPSSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVV 298 LA +LD +V NE+ A +Q + IF R PS++I YL RI + T S C + +YLDR+ ++ +SL VHRLL+ +VM+A K D + + ++ + R GV VVEL LE+E L L + L V Sbjct: 17 LAAVLDRLVSRNEQFANAPSQQGKKLTIFHGLRAPSINIAKYLERIFKYTNCSPSCFVVGYVYLDRLIHRQPDLLVTSLNVHRLLVTSVMVATKMLDDVHFNNAF--FARVGGVSVVELNRLELEFLFRLDFKLSV 150
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|573944024|ref|XP_006654367.1| (PREDICTED: cyclin-P3-1 [Oryza brachyantha]) HSP 1 Score: 89.7373 bits (221), Expect = 1.998e-17 Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 0 Query: 166 LAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAK--EYPSSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQY-KKLPVFRQESP 324 LA LD VV NE L + + IF QR P LSIK Y RI + + S C + ALIY++R + Y +SL+VHRLL+ +V++AAK T D + ++ Y R G+ VE+ LE+++L L + L V L +G+ LQ K+ VF E P Sbjct: 40 LATYLDRVVQKNEDLLDSN-EIKNSSTIFHGQRAPDLSIKLYAERIFKYSECSPSCFVLALIYMERYLQQPHVYMTSLSVHRLLITSVVVAAKFTDDAFFNNAF--YARVGGISTVEMNRLELDLLFNLDFRLKVD---LDTFGSYCLQLEKETRVFALERP 195
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|544211251|ref|XP_005536025.1| (similar to PREG1-like negative regulator [Cyanidioschyzon merolae strain 10D] >gi|449016337|dbj|BAM79739.1| similar to PREG1-like negative regulator [Cyanidioschyzon merolae strain 10D]) HSP 1 Score: 92.0485 bits (227), Expect = 2.541e-17 Identity = 58/171 (33.92%), Postives = 91/171 (53.22%), Query Frame = 0 Query: 140 PSPSGPIAAFLRTLP-EKDPAEVASRCLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKEYP---SSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAY 306 PSPS + ++ + +++ ++ R L+ L + V NE+ + G Q + F R PS+S++ Y RI S C + AL+YLDR+SA+ +S T HRLL+ AVMLAAK D + +Y Y + G+P+ E+ LE+ MLR L Y L V + + + Sbjct: 137 PSPSASLISWSAEINNDREKGDLVGRILSAALLSWVADNEQTRARGMQMQ-EASPFHASRIPSISVEAYFERIYTFAFCSKACYVIALLYLDRLSARNANLALTSFTAHRLLITAVMLAAKFFDDIFYNNAY--YAKVGGLPLSEMNALEVRMLRELSYQLNVSVEEFYNF 304
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|1178062623|gb|ORE17117.1| (cyclin-domain-containing protein [Rhizopus microsporus]) HSP 1 Score: 88.9669 bits (219), Expect = 2.857e-17 Identity = 54/160 (33.75%), Postives = 88/160 (55.00%), Query Frame = 0 Query: 158 PAEVASRCLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKE---YP-SSLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGTKALQY 313 P E+ + +A LL ++V N++L + + P + I YLSRI++ T S L++ LIY DRI+ + Y +SLTVHRLL+ ++++A+K T D +S Y + G+P+ EL LE+E L + ++DL V + AYG + L + Sbjct: 14 PTELLVKIVADLLISIVKENDKLSNQSVTHFHSRTV------PPIGIYAYLSRILKFTSFSNEALLSTLIYFDRIAQHKGLNYAVNSLTVHRLLITSILVASKFTSD--VFYSNTRYAKVGGIPLCELNQLELEFLFLCKFDLHVKLENMQAYGDQLLTH 165
BLAST of EWM20851.1 vs. NCBI_GenBank
Match: gi|1029109429|ref|XP_016721855.1| (PREDICTED: cyclin-U4-1-like isoform X1 [Gossypium hirsutum] >gi|1050627057|ref|XP_017636447.1| PREDICTED: cyclin-U4-1-like [Gossypium arboreum]) HSP 1 Score: 88.1965 bits (217), Expect = 3.326e-17 Identity = 54/148 (36.49%), Postives = 78/148 (52.70%), Query Frame = 0 Query: 165 CLAPLLDTVVDANERLQQAGAQPPPRKAIFRLQRRPSLSIKTYLSRIVEITGPSTRCLITALIYLDRISAKEYPS----SLTVHRLLLAAVMLAAKHTGDGNSSWSYDIYTRATGVPVVELKILEMEMLRMLQYDLVVPPHQLFAYGT 308 CL + D N R Q P + ++F RP++SI++YL RI + S C I A IYLDR AK+ P+ S VHRLL+ +VM+AAK D + +Y Y + G+ +E+ LEM+ L L + L V P+ + Y T Sbjct: 19 CLLQKVAESNDVNCRFQ------PQKVSVFHGLTRPTISIQSYLDRIYKYANCSPSCFIVAYIYLDRF-AKKKPTLPINSFNVHRLLITSVMVAAKFMDDIYYNNAY--YAKVGGISTIEMNYLEMDFLFGLGFHLNVAPNTFYTYFT 157 The following BLAST results are available for this feature:
BLAST of EWM20851.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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