EWM20849.1, cds9821 (CDS) Nannochloropsis gaditana

Overview
NameEWM20849.1
Unique Namecds9821
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:267066..267103 +
Alignment locationKK037256.1:267209..267405 +
Alignment locationKK037256.1:267521..267576 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20849.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100514g2.5673.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:267066..267103 +
KK037256.1supercontigKK037256.1:267209..267405 +
KK037256.1supercontigKK037256.1:267521..267576 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS
Homology
BLAST of EWM20849.1 vs. NCBI_GenBank
Match: gi|585100787|gb|EWM20849.1| (hypothetical protein Naga_100514g2 [Nannochloropsis gaditana])

HSP 1 Score: 197.593 bits (501), Expect = 3.951e-64
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
Query:    1 MQVSFPDDFFLASDPDNRTWQGQQTLVYHLAAQTIQALIRGVLARGVRKEVQHDEPERNKIDSSRRLKLGNSASQGVDAFRSPPGSSTLSSLPSIT 96
            MQVSFPDDFFLASDPDNRTWQGQQTLVYHLAAQTIQALIRGVLARGVRKEVQHDEPERNKIDSSRRLKLGNSASQGVDAFRSPPGSSTLSSLPSIT
Sbjct:    1 MQVSFPDDFFLASDPDNRTWQGQQTLVYHLAAQTIQALIRGVLARGVRKEVQHDEPERNKIDSSRRLKLGNSASQGVDAFRSPPGSSTLSSLPSIT 96          
The following BLAST results are available for this feature:
BLAST of EWM20849.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100787|gb|EWM20849.1|3.951e-64100.00hypothetical protein Naga_100514g2 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9852rna9852Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications