EWM29696.1, cds982 (CDS) Nannochloropsis gaditana

Overview
NameEWM29696.1
Unique Namecds982
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:899318..901231 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29696.1
ProductPhosphorylated CTD interacting factor 1, WW domain protein
Orig transcript idgnl|cribi|Naga_100114g9.2481.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:899318..901231 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR022035PCIF1_WW
Homology
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|585112272|gb|EWM29696.1| (Phosphorylated CTD interacting factor 1, WW domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1321.99 bits (3420), Expect = 0.000e+0
Identity = 637/637 (100.00%), Postives = 637/637 (100.00%), Query Frame = 0
Query:    1 MDALLEEMYMAQRGGSTSYAHKDIKAPETEEGPEEDAGDNPTCAASSSTPSLWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGMDLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAARRRDQGLDQRTERGARLREGCEEDGEVPEASSESNAFEGEGGRGPVECATQQGSRPPSWKRAGAPSSMLYQKDALSSSKKKRSARHEKRGSNSTAARS 637
            MDALLEEMYMAQRGGSTSYAHKDIKAPETEEGPEEDAGDNPTCAASSSTPSLWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGMDLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAARRRDQGLDQRTERGARLREGCEEDGEVPEASSESNAFEGEGGRGPVECATQQGSRPPSWKRAGAPSSMLYQKDALSSSKKKRSARHEKRGSNSTAARS
Sbjct:    1 MDALLEEMYMAQRGGSTSYAHKDIKAPETEEGPEEDAGDNPTCAASSSTPSLWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGMDLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAARRRDQGLDQRTERGARLREGCEEDGEVPEASSESNAFEGEGGRGPVECATQQGSRPPSWKRAGAPSSMLYQKDALSSSKKKRSARHEKRGSNSTAARS 637          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|675196855|ref|XP_008907312.1| (hypothetical protein PPTG_13417 [Phytophthora parasitica INRA-310] >gi|567987017|gb|ETL37331.1| hypothetical protein L916_10919 [Phytophthora parasitica] >gi|568016315|gb|ETL90492.1| hypothetical protein L917_10825 [Phytophthora parasitica] >gi|568092750|gb|ETN07555.1| hypothetical protein PPTG_13417 [Phytophthora parasitica INRA-310])

HSP 1 Score: 248.44 bits (633), Expect = 8.227e-72
Identity = 169/496 (34.07%), Postives = 237/496 (47.78%), Query Frame = 0
Query:   46 SSSTPS-LWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGM-DLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAA 539
            SS+ PS +W P  + P+ +    K  ++A+     P++  EI R   +  L C  + + + DLG+  L    +E W F+ + T    DP++P       H  +    L  E  + GA+   A +  ++L + + ++L +  +             A  +   ++ V  D   G+  L +   TV ++  H+ KLR + AR  G+     G D S   L            E +R F   +F LLLRY SL      GGGFQ A+NEE FD+L +  DC+MECFASPLNC Y+R+CSAF DTD  FGS+G+FF+F PR G +EANPPF P VI RM DHM  LL A   PL F+V+IPAWQ+ +G                                                    W +L  S F   H+L+  + HGY EG Q    TR++ + FDTSVFF QN+ A  KWP +E+  E LK A  SK   E  A
Sbjct:   47 SSTPPSGIWNPLEEMPLSSTVLRKLEDAARTRPVNPAM--EIARQQTVRAL-CNKIRRASEDLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQD---------FVAGKKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFARKQGL-----GGDGSNMAL------------EVQRQFESALFCLLLRYDSL-----DGGGFQAALNEECFDMLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEG----------------------------------------------------WQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|570324622|gb|ETO72570.1| (hypothetical protein F444_11377 [Phytophthora parasitica P1976] >gi|570948426|gb|ETP13683.1| hypothetical protein F441_11231 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 248.44 bits (633), Expect = 8.670e-72
Identity = 169/496 (34.07%), Postives = 237/496 (47.78%), Query Frame = 0
Query:   46 SSSTPS-LWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGM-DLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAA 539
            SS+ PS +W P  + P+ +    K  ++A+     P++  EI R   +  L C  + + + DLG+  L    +E W F+ + T    DP++P       H  +    L  E  + GA+   A +  ++L + + ++L +  +             A  +   ++ V  D   G+  L +   TV ++  H+ KLR + AR  G+     G D S   LK             +R F   +F LLLRY SL      GGGFQ A+NEE FD+L +  DC+MECFASPLNC Y+R+CSAF DTD  FGS+G+FF+F PR G +EANPPF P VI RM DHM  LL A   PL F+V+IPAWQ+ +G                                                    W +L  S F   H+L+  + HGY EG Q    TR++ + FDTSVFF QN+ A  KWP +E+  E LK A  SK   E  A
Sbjct:   47 SSTPPSGIWNPLEEMPLSSTVLRKLEDAARTRPVNPAM--EIARQQTVRAL-CNKIRRASEDLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQD---------FVAGKKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFARKQGL-----GGDGSNMALK------------VQRQFESALFCLLLRYDSL-----DGGGFQAALNEECFDMLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEG----------------------------------------------------WQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|566020956|gb|ETI43867.1| (hypothetical protein F443_11310 [Phytophthora parasitica P1569] >gi|567958328|gb|ETK83917.1| hypothetical protein L915_11020 [Phytophthora parasitica] >gi|568046702|gb|ETM43807.1| hypothetical protein L914_10859 [Phytophthora parasitica])

HSP 1 Score: 248.44 bits (633), Expect = 8.670e-72
Identity = 169/496 (34.07%), Postives = 237/496 (47.78%), Query Frame = 0
Query:   46 SSSTPS-LWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGM-DLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAA 539
            SS+ PS +W P  + P+ +    K  ++A+     P++  EI R   +  L C  + + + DLG+  L    +E W F+ + T    DP++P       H  +    L  E  + GA+   A +  ++L + + ++L +  +             A  +   ++ V  D   G+  L +   TV ++  H+ KLR + AR  G+     G D S   LK             +R F   +F LLLRY SL      GGGFQ A+NEE FD+L +  DC+MECFASPLNC Y+R+CSAF DTD  FGS+G+FF+F PR G +EANPPF P VI RM DHM  LL A   PL F+V+IPAWQ+ +G                                                    W +L  S F   H+L+  + HGY EG Q    TR++ + FDTSVFF QN+ A  KWP +E+  E LK A  SK   E  A
Sbjct:   47 SSTPPSGIWNPLEEMPLSSTVLRKLEDAARTRPVNPAM--EIARQQTVRAL-CNKIRRASEDLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQD---------FVAGKKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFARKQGL-----GGDGSNMALK------------VQRQFESALFCLLLRYDSL-----DGGGFQAALNEECFDMLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEG----------------------------------------------------WQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|970637841|gb|KUF81667.1| (Phosphorylated CTD-interacting factor 1 [Phytophthora nicotianae])

HSP 1 Score: 247.669 bits (631), Expect = 1.751e-71
Identity = 169/496 (34.07%), Postives = 237/496 (47.78%), Query Frame = 0
Query:   46 SSSTPS-LWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGM-DLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAA 539
            SS+ PS +W P  + P+ +    K  ++A+     P++  EI R   +  L C  + + + DLG+  L    +E W F+ + T    DP++P       H  +    L  E  + GA+   A +  ++L + + ++L +  +             A  +   ++ V  D   G+  L +   TV ++  H+ KLR + AR  G+     G D S   LK             +R F   +F LLLRY SL      GGGFQ A+NEE FD+L +  DC+MECFASPLNC Y+R+CSAF DTD  FGS+G+FF+F PR G +EANPPF P VI RM DHM  LL A   PL F+V+IPAWQ+ +G                                                    W +L  S F   H+L+  + HGY EG Q    TR++ + FDTSVFF QN+ A  KWP +E+  E LK A  SK   E  A
Sbjct:   47 SSTPPSGIWNPLEEMPLSSTVLRKLEDAARTRPVNPAM--EIARQQTVRAL-CNKIRRASEDLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQD---------FVAGKKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFARKQGL-----GGDGSNMALK------------VQRQFESALFCLLLRYDSL-----DGGGFQAALNEECFDMLLKXFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEG----------------------------------------------------WQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|953502442|emb|CEG36430.1| (Phosphorylated CTD interacting factor 1, WW domain [Plasmopara halstedii])

HSP 1 Score: 247.284 bits (630), Expect = 3.542e-71
Identity = 162/498 (32.53%), Postives = 237/498 (47.59%), Query Frame = 0
Query:   45 ASSSTP--SLWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGM-DLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAA 539
             SS TP   +W P  +  + +    K   + +     P++  E+ RH  +  L C  + + + DLG+  L    FE W  + + T    DP++P P   N++       L  E  + GA+   A ++ + L + + ++L +  + +              +++  + V  D  R    L     TV ++  H+ K+R L+AR       + G+D   G+           S + +R F   +F LLLRY SL GG     GFQ A+NEE FDVL    DC+MECFASPLNC Y+R+CSAF DTD  FGS+G+FF+F PR G +EANPPF P VI RM DHM +LL A   PL F+V+IP+WQ  +G                                                    W +L  S +   HVL+  + HG+ EG Q    TR++ + FDTS+FFLQN+ A  +WP +++  + LKQA  SK   E  A
Sbjct:   47 VSSLTPPSGIWNPNAEMQLSSSTLLKLEEAVRTCNVSPAM--EVARHQIVRAL-CKKIRRASEDLGIGKLSNSAFENWQLTSQLTYNKLDPLIPPPE--NDYST-----LAEEFRKAGATRSGATKMCKALRRESDRMLRKFHQQNF----------VNGKNMVHVTVSNDDMR---LLTFGQSTVKISAIHFAKMRELYAR-------KHGLDNGDGS---------SMSLKNQRHFATALFCLLLRYDSLDGG-----GFQAALNEECFDVLLEEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMAELLTAANGPLTFIVIIPSWQKTEG----------------------------------------------------WQQLNASRYNQRHVLIPQKQHGFCEGKQQLRKTRWRIASFDTSIFFLQNSKACNQWPVTDQKLKLLKQAFKSKQADERDA 448          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|570981305|gb|ETP41745.1| (hypothetical protein F442_11218 [Phytophthora parasitica P10297])

HSP 1 Score: 245.358 bits (625), Expect = 1.412e-70
Identity = 168/496 (33.87%), Postives = 236/496 (47.58%), Query Frame = 0
Query:   46 SSSTPS-LWRPEVKPPMDALHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGM-DLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAA 539
            SS+ PS +W P  + P+ +    K  ++A+     P++  EI R   +  L C  + + + DLG+  L    +E W F+ + T    DP++P       H  +    L  E  + GA+   A +  ++L + + ++L +  +             A  +   ++ V  D   G+  L +   TV ++  H+ KLR + AR  G+     G D S   LK             +R F   +F LLLRY SL      GGGFQ A+NEE FD+L +  DC+MECFASPLNC Y+R+CSAF DTD  FGS+G+FF+F PR G +EANPPF   VI RM DHM  LL A   PL F+V+IPAWQ+ +G                                                    W +L  S F   H+L+  + HGY EG Q    TR++ + FDTSVFF QN+ A  KWP +E+  E LK A  SK   E  A
Sbjct:   47 SSTPPSGIWNPLEEMPLSSTVLRKLEDAARTRPVNPAM--EIARQQTVRAL-CNKIRRASEDLGIGKLPNSAYETWQFTSQLTVKEHDPLIP-------HAGSDYSGLFEEFRKAGATKSGATKKCKELTRESERMLRKFGQQD---------FVAGKKKKVQVTVMED---GMRQLTYGHLTVKLSADHFAKLREMFARKQGL-----GGDGSNMALK------------VQRQFESALFCLLLRYDSL-----DGGGFQAALNEECFDMLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFISKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEG----------------------------------------------------WQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLESLKLAFKSKQADERDA 446          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|695372679|ref|XP_009514873.1| (hypothetical protein PHYSODRAFT_467960 [Phytophthora sojae] >gi|348687784|gb|EGZ27598.1| hypothetical protein PHYSODRAFT_467960 [Phytophthora sojae])

HSP 1 Score: 242.662 bits (618), Expect = 1.731e-70
Identity = 159/459 (34.64%), Postives = 221/459 (48.15%), Query Frame = 0
Query:   84 LEILRHDAIGTLTCFFLNKVNRDLGM-DLRVPLFERWLFSQRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGR-GLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQ-GAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAETAA 539
            +EI R   +  L C  + + + DLG+  L    +E W F+ +      DP++P       H  +    L  EL + GA+   A +  ++L + + +LL +  +               + +  K  VH  A   G+  L + + TV ++  H+ KLR ++AR  G+     G D S              + +++R F   +F LLLRY SL      GGGFQ  A+NEE FDVL +  DC+MECFASPLNC Y+R+CSAF DTD  FGS+G+FF+F PR G +EANPPF P VI RM DHM  LL A   PL F+V+IPAWQD +G                                                    W +L  S +   H+L+  + HGY EG Q    TR++ + FDTSVFF QN+ A  KWP +E+  + LK A  SK   E  A
Sbjct:    1 MEIARQQTVRAL-CNKIRRASEDLGIGKLPNSAYETWQFTSQLKVKELDPLIP-------HAGSDYSGLFEELRKAGATKSGATKKCKELTRESERLLRKFGQQD-------------FVAGKKKRVHVAAAEDGMRQLTYGNSTVKLSAAHFAKLREMYARKQGL-----GGDGS------------SMAPKDQRSFESALFCLLLRYDSL-----DGGGFQQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDCAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQDTEG----------------------------------------------------WQQLNSSRYNQTHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLDSLKSAFKSKQADERDA 364          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|301093680|ref|XP_002997685.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262109934|gb|EEY67986.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 226.868 bits (577), Expect = 5.082e-65
Identity = 142/417 (34.05%), Postives = 194/417 (46.52%), Query Frame = 0
Query:  123 QRPTDGTGDPILPDPRLNNEHERAGRHLLMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHAR---FGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQACASKHEAE 536
            Q+   G+ DP++P       H  +  + L  EL + GA+   A +  +++ + + ++L +  +    +           +             G+  L +   TV ++  H+ KLR + A+    GG   N    D+ Q                        +F LLLRY SL GG     GFQ A+NEE FDVL +  DC+MECFASPLNC Y+R+CSAF DTD  FGS+G+FF+F PR G +EANPPF P VI RM DHM  LL A   PL F+V+IPAWQ+ +G                                                    W +L  S F   H+L+  + HGY EG Q    TR++ + FDTSVFF QN+ A  KWP +E+  E LKQA  SK   E
Sbjct:    6 QQADLGSRDPLIP-------HAGSDYNGLFEELRKAGATKSGAIKKCKEITRESERMLRKFGQQDFVVGKKKKVQVTVMED------------GMRQLTYGRSTVKLSANHFTKLREMFAKKQGLGGDGSNMAPKDQQQ--------------------LECALFCLLLRYESLDGG-----GFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAADGPLAFIVIIPAWQETEG----------------------------------------------------WQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLEGLKQAFRSKQADE 326          
BLAST of EWM29696.1 vs. NCBI_GenBank
Match: gi|298711525|emb|CBJ26613.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 236.113 bits (601), Expect = 2.704e-64
Identity = 169/514 (32.88%), Postives = 238/514 (46.30%), Query Frame = 0
Query:   28 ETEEGPEEDAGDNPTCAASSSTPSLWRPEVKPPMDA-LHHAKTYNSAQNMMHQPSLSLEILRHDAIGTLTCFFLNKVNRDLGMDLRVPLFERWLFSQRPTDG-TGDPILP-----DPRLNNEHERAGRHL-----LMRELIEGGASNDTAKRVIEQLNKTAVKLLCRIQRASASLNPPSVSLEARWQSLSKIYVHFDAGRGLYSLRHKSKTVTVNRRHYEKLRALHARFGGMSINRPGIDRSQGNLKHGKRERPGKSAEEERFFHLRVFLLLLRYSSLAGGTDRGGGFQGAINEEAFDVLRRHLDCRMECFASPLNCMYARYCSAFQDTDACFGSLGTFFNFRPRQGTYEANPPFSPCVIARMVDHMEDLLEATALPLGFVVVIPAWQDGKGERTREDEEKGVTREAEEERPESTRVTASKGASMSREPNKRGAKAIYKASAASWSRLRESSFCALHVLLRAQDHGYIEGGQHKTPTRFKTSFFDTSVFFLQNAAAKRKWPASERMAEELKQAC 529
            +T   P   AG+      +    S+W P V  P  A         + + +    S   E+LR  A+  +   F   + ++LG+ ++  +FERW FS++  +G  GDPILP     DP L+ E +  G H      L  EL  G AS    K + +QL          +   +A+++ PS  + AR           D     Y L+     + +N  HY+K++ L +R    S       R   + +H      G        FH  +F  L+RY +L     +GGGFQ ++  +AFDVL +    RMECFASP NC Y+RYCSAF DTD  FGS G+FF+F+P QG YEANPPF   VI +M +HM+ LL+ATA  L FVV+IP W+D                                                    +A W RLR+S+F + H+ L  +DHGY EG QH    R++ + F TSVFFLQ   A+R     ++  E L QAC
Sbjct:   35 DTRTHPAPAAGEFACVPETGWNSSIWNPHVFEPAAAPTVFGVASRTGEGLRRVVSPQEEVLRQQAVAIVFSRF-QVLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCEL--GRASKSALKTLKKQLRGV-------VNGPAAAVSAPSKRVAAR---------KLDGN--TYVLQLGKNKLRMNSAHYDKMKELFSR----SRVEGAARRQSSSTEHPPPAWIGD-------FHDCLFSCLMRYEAL-----QGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQATAKALTFVVIIPCWED----------------------------------------------------SAGWKRLRDSAFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARR-----QQSPETLGQAC 454          
The following BLAST results are available for this feature:
BLAST of EWM29696.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112272|gb|EWM29696.1|0.000e+0100.00Phosphorylated CTD interacting factor 1, WW domain... [more]
gi|675196855|ref|XP_008907312.1|8.227e-7234.07hypothetical protein PPTG_13417 [Phytophthora para... [more]
gi|570324622|gb|ETO72570.1|8.670e-7234.07hypothetical protein F444_11377 [Phytophthora para... [more]
gi|566020956|gb|ETI43867.1|8.670e-7234.07hypothetical protein F443_11310 [Phytophthora para... [more]
gi|970637841|gb|KUF81667.1|1.751e-7134.07Phosphorylated CTD-interacting factor 1 [Phytophth... [more]
gi|953502442|emb|CEG36430.1|3.542e-7132.53Phosphorylated CTD interacting factor 1, WW domain... [more]
gi|570981305|gb|ETP41745.1|1.412e-7033.87hypothetical protein F442_11218 [Phytophthora para... [more]
gi|695372679|ref|XP_009514873.1|1.731e-7034.64hypothetical protein PHYSODRAFT_467960 [Phytophtho... [more]
gi|301093680|ref|XP_002997685.1|5.082e-6534.05conserved hypothetical protein [Phytophthora infes... [more]
gi|298711525|emb|CBJ26613.1|2.704e-6432.88conserved unknown protein [Ectocarpus siliculosus][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna983rna983Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications