EWM20866.1, cds9807 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|585100807|gb|EWM20866.1| (crooked neck protein [Nannochloropsis gaditana]) HSP 1 Score: 563.918 bits (1452), Expect = 0.000e+0 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWKDALAKAKAGGSQQEGDAGTKGGAGKRKREGEEGEEGEEEGEDRGS 290 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWKDALAKAKAGGSQQEGDAGTKGGAGKRKREGEEGEEGEEEGEDRGS Sbjct: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWKDALAKAKAGGSQQEGDAGTKGGAGKRKREGEEGEEGEEEGEDRGS 290
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|219118326|ref|XP_002179940.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217408993|gb|EEC48926.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 266.544 bits (680), Expect = 1.001e-80 Identity = 146/253 (57.71%), Postives = 174/253 (68.77%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREG-GMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPS-GLAILQKAQAWKDALAKA 251 +G+AIG+C KE +F Y+ LEL LGEV+RCR LY+ YL+A P +C+AW A LE VGE ER RA+ ELAI QPALDMPE LWK YIDFEIE E+ GE R LYERLLERT HVKVWISYA +EG G G+EGARAVFE+ Y HLKAQ L EER+LLL+AWR EK G + +A VEAK+P+R+K+KRM E G++ GWEEY+DY FPDDE S IL+ A WK A+A Sbjct: 443 LGRAIGQCG-KERIFIEYVALELALGEVDRCRNLYSNYLKAMPHNCKAWFKYADLEKSVGETERCRAIFELAIAQPALDMPEMLWKGYIDFEIE-----ENEGENARK----------LYERLLERTSHVKVWISYAQFEGTDIGKGLEGARAVFEQAYDHLKAQGLSEERVLLLDAWRVFEKSNGSQKDVADVEAKMPRRIKRKRMREDESGKDLGWEEYFDYQFPDDEGGASNNFKILEMAAKWKQQRAEA 679
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|299472137|emb|CBN77122.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 267.7 bits (683), Expect = 1.407e-80 Identity = 143/247 (57.89%), Postives = 169/247 (68.42%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRAS--LAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWK 245 +GQAIG CP KE LFK Y+QLE LGE++RCR +Y+K LEA+PS C W A LE VGE ER RAV ELAI QP LDMPE LWK YIDF E E+G E R R L+ERLLERT+HVKVWISYA YE E ++ AR VF RGY HL+ Q LKEER+ LLEAWRA EK +G + L VE+K+P++ KK+RM+ G +G GWEEYYDY FPDDE +P+ L IL+ AQ WK Sbjct: 425 LGQAIGMCP-KEKLFKGYVQLERDLGEIDRCRKVYSKCLEAFPSDCGVWAQFAALEGSVGETERSRAVFELAIRQPVLDMPETLWKAYIDF--EAENG-------------ETERARQLFERLLERTQHVKVWISYAQYEAKAE--LDTARVVFRRGYDHLRRQGLKEERVKLLEAWRAAEKAEGKGKTRGLKEVESKMPRKFKKRRMMTGTNGEGMGWEEYYDYQFPDDETKPANLKILEMAQKWK 653
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|390369349|ref|XP_787751.3| (PREDICTED: crooked neck-like protein 1 [Strongylocentrotus purpuratus]) HSP 1 Score: 243.817 bits (621), Expect = 1.957e-76 Identity = 127/251 (50.60%), Postives = 165/251 (65.74%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYE--GGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWKDALA 249 MG AIG+CP K+ LFK+YI++ELQL E +RCR LY K+LE P++C WM A LE +G+ +R RAV ELAI+QP LDMPE LWK +IDFE+E E+ W++ RALY RLLERT+HVKVWIS+A E G E + +R V++ LK E KEERL+LLEAW+ E E GD S+ V+ ++P ++KK+R + EDG + GWEEYYDY FP DE S L +L A+ WK +A Sbjct: 46 MGTAIGKCP-KDKLFKSYIEMELQLREFDRCRVLYEKFLEFNPANCTTWMKYAELETILGDIDRSRAVYELAISQPRLDMPEVLWKSFIDFEVEQEE-WDNS--------------RALYRRLLERTQHVKVWISFAKCELSVGSEDCVLRSRQVYDEANKALKHVEEKEERLMLLEAWQEFENEFGDDESVEQVQEQMPNKVKKRRKIQTEDGSDAGWEEYYDYIFPSDETNQSNLKLLAMAKMWKQKMA 280
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|224003701|ref|XP_002291522.1| (cell cycle control protein cwf4 [Thalassiosira pseudonana CCMP1335] >gi|220973298|gb|EED91629.1| cell cycle control protein cwf4 [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 255.758 bits (652), Expect = 2.036e-76 Identity = 137/249 (55.02%), Postives = 171/249 (68.67%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREG-GMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSG-LAILQKAQAWKDA 247 +G+AIG C KE +F+ YI LEL LGEV+RCR+LY YL+A P +C+AW A LE VGE ER RA+ ELA+ QPALDMPE LWK YIDFEIE +G + RALYERLLE+T HVKVWIS+A +EG G G++ AR+ F+R + LK LKEER+LLL+AWR EK +GD SLA V++ +P+R+K+KRM EDG E GWEEY+DY FP+DE +G L IL+ A WK A Sbjct: 459 LGKAIGLCG-KERIFEEYIALELALGEVDRCRSLYTNYLKAMPHNCRAWSKYAELEKSVGESERCRAIYELAVAQPALDMPEMLWKNYIDFEIEESEG---------------DKARALYERLLEKTGHVKVWISFAQFEGTEVGKGVDAARSTFDRAHERLKEAGLKEERVLLLDAWRVFEKTKGDAQSLAKVDSMLPRRVKRKRMRTDEDGAELGWEEYFDYHFPNDEDANAGNLKILEMAAKWKQA 691
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|857974922|emb|CEO99084.1| (hypothetical protein PBRA_007198 [Plasmodiophora brassicae]) HSP 1 Score: 249.595 bits (636), Expect = 1.826e-74 Identity = 126/245 (51.43%), Postives = 164/245 (66.94%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWK 245 +G+AIG P KE LFK+YIQLELQLG+ +RCRTLY KYL P +C AW A LE + E ER RA+ ELAI+QP LDMPE LWK YIDFE + + + R R+LY+RLLE+TKHVKVWIS A +E + ++ AR VFER +LKA+ + ER LLEAWR E++ G+ A+ V ++P+RLKK+R++ EDG + GWEEYYDY FPDD + +A+L+KA+ WK Sbjct: 432 LGRAIGMAP-KEKLFKSYIQLELQLGDADRCRTLYEKYLIYSPENCHAWSKFANLEKSLAENERARAIFELAISQPVLDMPEVLWKAYIDFETQQD---------------QFDRARSLYDRLLEKTKHVKVWISLAQFETS-QNQLDKARHVFERADKYLKAESRRSERAQLLEAWRDFERKYGNEATQTVVSDRMPRRLKKRRLLTNEDGTDAGWEEYYDYEFPDDAKGAANIALLEKARLWK 659
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|260822509|ref|XP_002606644.1| (hypothetical protein BRAFLDRAFT_57911 [Branchiostoma floridae] >gi|229291988|gb|EEN62654.1| hypothetical protein BRAFLDRAFT_57911 [Branchiostoma floridae]) HSP 1 Score: 248.44 bits (633), Expect = 2.689e-74 Identity = 138/268 (51.49%), Postives = 173/268 (64.55%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREGGMEGARA--VFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWKDALAKAKAGGSQQEGDAGTKG 266 +G AIGRCP K+ LFK YI+LELQL E +RCR LY K+LE P +C +W+ A LE +G+ ER RA+ ELAI+QP LDMPE LWK YIDFEIE E E RVR LY RLLERT+HVKVWISYA +E G ARA +FE+G L++ E KEERL+LLEAWR +E+E G SL V +P+R+KK+R V EDG + GWEEYYDY FP+DE L +L A+ WK+ K + ++ E ++ T G Sbjct: 383 LGNAIGRCP-KDKLFKGYIELELQLREFDRCRILYEKFLEFGPENCTSWIKFAELETILGDVERARAIYELAISQPKLDMPEMLWKSYIDFEIEQE---------------EPQRVRELYGRLLERTQHVKVWISYAKFELSVAGDDMAARARKIFEQGNRSLRSCEEKEERLMLLEAWRDVEEEAGTAESLEKVNKLMPKRVKKRRKVQTEDGMDAGWEEYYDYIFPEDEANQPNLKLLAMAKRWKE--QKEREAENEGESESNTIG 632
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|957844216|ref|XP_014672501.1| (PREDICTED: crooked neck-like protein 1 [Priapulus caudatus]) HSP 1 Score: 248.44 bits (633), Expect = 3.283e-74 Identity = 138/287 (48.08%), Postives = 175/287 (60.98%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYE-GGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAW-KDALAKAKAGGSQQEGDAGTKGGAGKRKREGEEGEEGEEEG 285 +G AIGRCP K+ LF+ YI LE+QL E ERCR LY K+LE P +C W+ A LE +G++ER RA+ ELAI+QP LDMPE LWK YIDFEIE + E R RALY RLLERT+HVKVWIS+A +E + R V+ +K+ + KEERL+LLE+WR E E GD + A VE +P+R+KK+R V EDG + GWEEY+DY FP DE L +L A+AW K +A Q DA + G G+ EG +GEE +EG Sbjct: 310 LGMAIGRCP-KDKLFRGYIDLEIQLREFERCRILYEKFLETGPENCTTWIKFAELETILGDQERARAIYELAISQPRLDMPEVLWKSYIDFEIEAD---------------EYARTRALYRRLLERTQHVKVWISFAQFELSVNPDDVSFCRGVYAEANKAMKSSDEKEERLMLLESWREFEVEHGDEKTKADVENMMPKRVKKRRKVQTEDGSDAGWEEYFDYIFPSDEAAMPNLKLLAMAKAWRKKQEEQASNDIPTQVADADPEEGEGETINEG-DGEETVKEG 579
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|395509848|ref|XP_003759199.1| (PREDICTED: crooked neck-like protein 1, partial [Sarcophilus harrisii]) HSP 1 Score: 235.343 bits (599), Expect = 1.354e-73 Identity = 124/264 (46.97%), Postives = 160/264 (60.61%), Query Frame = 0 Query: 2 GQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYE--GGREGGMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDEVRPSGLAILQKAQAWKDALAKAKAGGSQQEGDAG 263 G +IG+CP K LFK YI+LELQL E +RCR LY K+LE P +C +W+ A LE +G+ ER RA+ ELAI+QP LDMPE LWK YIDFEIE E E + R+LY RLL+RT+HVKVWIS+A +E G E + R ++E ++ E KEERL+LLE+WR E E G + V+ +P+++KK+R V EDG + GWEEYYDY FP+D L +L A+ WK QQE DA Sbjct: 1 GTSIGKCP-KNKLFKVYIELELQLREFDRCRKLYEKFLEFAPENCTSWIKFAELETILGDIERARAIYELAISQPRLDMPEVLWKSYIDFEIEQE---------------ESEKTRSLYRRLLQRTQHVKVWISFAQFELSAGNEESLTKCRQIYEEANKTMRNCEEKEERLMLLESWRNFEDEFGTESHKERVDKLMPEKVKKRRKVQAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMAKLWK---------KQQQEKDAA 239
BLAST of EWM20866.1 vs. NCBI_GenBank
Match: gi|1210525813|dbj|GAX15419.1| (crooked neck [Fistulifera solaris]) HSP 1 Score: 247.284 bits (630), Expect = 2.011e-73 Identity = 128/230 (55.65%), Postives = 163/230 (70.87%), Query Frame = 0 Query: 1 MGQAIGRCPEKESLFKAYIQLELQLGEVERCRTLYAKYLEAWPSSCQAWMDMAGLEIGVGERERGRAVLELAINQPALDMPERLWKYYIDFEIEGEDGWEDRGEEGRGEGREEGRVRALYERLLERTKHVKVWISYATYEGGREG-GMEGARAVFERGYAHLKAQELKEERLLLLEAWRALEKEQGDRASLAAVEAKVPQRLKKKRMVVGEDGREEGWEEYYDYAFPDDE 229 G+AIG C KE +F YI LEL LGE++RCR++Y YL+A P +C+AW + A LE VGE ER RA+ ELAI+QPALDMPE LWK YIDFEIE GEG+ R RALY+RLLE+T HVKVWIS+A +E G GM+ +R + E+ L+ ++L EER+LLL+AWR LE+E GD S++ VEAK+P+R+K+KRM GE G + GWEEY+DY FPDDE Sbjct: 443 FGKAIGLCG-KEKIFTEYIALELALGEIDRCRSIYNSYLKAMPHNCKAWSNFAELEKSVGETERCRALFELAISQPALDMPEVLWKAYIDFEIE------------EGEGK---RARALYQRLLEKTNHVKVWISWAQFEATPVGLGMDESRTIMEKADDQLRKEQLSEERVLLLDAWRVLEQEHGDVDSVSKVEAKMPRRIKRKRMRQGEQGNDLGWEEYFDYQFPDDE 656 The following BLAST results are available for this feature:
BLAST of EWM20866.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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