EWM20871.1, cds9804 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|585100814|gb|EWM20871.1| (gpr7 transmembrane protein [Nannochloropsis gaditana]) HSP 1 Score: 683.715 bits (1763), Expect = 0.000e+0 Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 0 Query: 1 MPHLPSRHFLFALLFPLVVHSFKYQIDERYAETAKWSYTETYMYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPLVSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASEIAEAP 335 MPHLPSRHFLFALLFPLVVHSFKYQIDERYAETAKWSYTETYMYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPLVSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASEIAEAP Sbjct: 1 MPHLPSRHFLFALLFPLVVHSFKYQIDERYAETAKWSYTETYMYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPLVSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASEIAEAP 335
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|298704851|emb|CBJ28368.1| (G-protein coupled receptor [Ectocarpus siliculosus]) HSP 1 Score: 197.593 bits (501), Expect = 3.388e-55 Identity = 113/336 (33.63%), Postives = 178/336 (52.98%), Query Frame = 0 Query: 6 SRHFLFALLFPLVVHSFKYQIDERYAETAKWSYTETYMYGSGQGPLAWNNGDASVHLNLSLRLSTLTE--EDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDY--VPDSDLCALEFPPGASDRAMHTVMAHKVEAAP---GEGPASTEWAARVEADYKVLESGVQNVLFQICPPLVSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASEIAEA 334 +R FA SFKY +D+ E A+ SY+E +MYGS GP+ +G + +H +L + L E N+S++FY +DY + ++C P ++ + + V A +G + A V A ++ ESG+Q+ Q+CP V + AG L FRNPYG+LPG YG LPFE R A + + + + HR +L +H I+ V+V++T E+ +W+ A+S++N G PYCCP+P VVV AM+ E+V++T SR +LL+ICLGYGI R L + E +S+ L++ + + ++ AS + A Sbjct: 8 ARASFFAACLVGAGQSFKYSLDDTVYEQARTSYSEGWMYGSNTGPMGATHGSSYIHTDLQVTAIPLREPSSGEFNISIMFYRSTV--------------LDYGVYENLNICDERVSPPSAFTDVEVISFPAVRNADYGAEDGALGQAYTADVLAHREITESGLQHAFIQVCPTDVGAEVLNTAGSLDFRNPYGYLPGADYGCLPFEVFRVVASMALGIGFGYAMLAHRASILPVHKMIIGVIVLSTLEASTWWGAYSYVNATGRPYCCPYPGVVVLAMLMEVVRRTTSRFMLLMICLGYGITRVQLERREMISVCALTVAFFASGIVQLASSVGSA 329
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|676393507|ref|XP_009040031.1| (expressed protein [Aureococcus anophagefferens] >gi|323449498|gb|EGB05386.1| expressed protein [Aureococcus anophagefferens]) HSP 1 Score: 159.073 bits (401), Expect = 3.163e-41 Identity = 100/290 (34.48%), Postives = 151/290 (52.07%), Query Frame = 0 Query: 19 VHSFKYQIDERYAETAKWSYTETYMYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPLVSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGE 308 V S+K+ I + Y + K S++E Y YG+ GP G + V ++L +LS NV+VL + + GG +LCA E P G A + V + ++ Y+V SG+Q V Q+C V + L G ++F+NPYGFLP ++G+LPFE R +F F + L+ HR LL LHYAI + ++A AE+ +WF ++ MN G P CCPFP+ V++AM E +++T++RALLL++ LG+G+ R SL E Sbjct: 14 VASYKWDISDTYGQ-EKLSFSELYQYGTDDGPFPVTRGASYVLVDLEGQLSN--PYSSANVTVLAFTSPGELELGGV--------------NLCARELPAGVETSARRSFAVDAVSSR------------KIRLYYEVPTSGLQYVALQVCDSWAPVL-LRLEGTITFKNPYGFLPAMYFGFLPFELVRVASFACFLAYFFALLVIHRDKLLPLHYAIFAAALLAAAEAGAWFFSYLSMNASGAPLCCPFPSHVIAAMTLEFLRRTLTRALLLVVSLGHGVVRASLTTRE 273
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|301111358|ref|XP_002904758.1| (Gpr7 transmembrane protein [Phytophthora infestans T30-4] >gi|262095088|gb|EEY53140.1| Gpr7 transmembrane protein [Phytophthora infestans T30-4]) HSP 1 Score: 136.346 bits (342), Expect = 1.209e-32 Identity = 88/291 (30.24%), Postives = 143/291 (49.14%), Query Frame = 0 Query: 43 MYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVS-VLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPL--VSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASE 330 ++ + QGP+ G++SV +++S +D S V+F++ + ++ A AG ++ + SD+ ++F G SD V E+ P + V SG + +C + + +G + RNPYG LP YG LPF G +LV + ++ L+ +HR LL LH+ IL +LV+ TA S W AF MN G P CCP+P + A++ + +T++R +LL++CLGYGI R L + E + LSL Y + + DE + Sbjct: 41 LFATDQGPILARTGNSSVTIDIS---GVNVTQDMAGWSLVVFFYHVDNYEDFEAVAGK---IELLACSDVEGMKFD-GMSD-VQRFVFTVANESTP---------TVSANVSHLVNSSGWTDTQIFVCAEDEGAATETLTFSGSMEVRNPYGLLPAVLYGMLPFSGFLTVGYLVLDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWLYAFYRMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEASVIAFLSLAYFVSGIADEVTR 314
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|675193213|ref|XP_008905491.1| (hypothetical protein PPTG_11007 [Phytophthora parasitica INRA-310] >gi|568094148|gb|ETN08930.1| hypothetical protein PPTG_11007 [Phytophthora parasitica INRA-310]) HSP 1 Score: 136.346 bits (342), Expect = 1.298e-32 Identity = 88/290 (30.34%), Postives = 137/290 (47.24%), Query Frame = 0 Query: 43 MYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPL--VSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASE 330 ++ + QGP+ G++SV +++S ++ E + V FYH G ++ + SD+ ++F G SD V E P + V SG + +C + + G + RNPYG LP YG LPF G +LV + ++ L+ +HR LL LH+ IL +LV+ TA S WF AF MN G P CCP+P + A++ + +T++R +LL++CLGYGI R L + E + LSL Y + + DE + Sbjct: 41 LFATDQGPILARTGNSSVTIDIS-GVNVTQEMAGWRLVVFFYHVDNYEDF----ETVAGKIELLACSDVEGMKFD-GMSD-VQRFVFTVANETTP---------TVSANVSHLVNSSGWTDTQIFVCAEDEGAATETLTFTGSMEVRNPYGLLPAVLYGMLPFSGFLTVGYLVLDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWFYAFYKMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEVGVITFLSLAYFISGIADEVTR 314
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|970649904|gb|KUF89067.1| (Gpr7 transmembrane protein [Phytophthora nicotianae] >gi|970664427|gb|KUG01329.1| Gpr7 transmembrane protein [Phytophthora nicotianae]) HSP 1 Score: 135.191 bits (339), Expect = 3.218e-32 Identity = 87/290 (30.00%), Postives = 137/290 (47.24%), Query Frame = 0 Query: 43 MYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPL--VSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASE 330 ++ + QGP+ G++SV ++++ ++ E + V FYH G ++ + SD+ ++F G SD V E P + V SG + +C + + G + RNPYG LP YG LPF G +LV + ++ L+ +HR LL LH+ IL +LV+ TA S WF AF MN G P CCP+P + A++ + +T++R +LL++CLGYGI R L + E + LSL Y + + DE + Sbjct: 41 LFATDQGPILARTGNSSVTIDIN-GVNVTQEMAGWRLVVFFYHVDNYEDF----ETVAGKIELLACSDVEGMKFD-GMSD-VQRFVFTVANETTP---------TVSANVSHLVNSSGWTDTQIFVCAEDEGAATETLTFTGSMEVRNPYGLLPAVLYGMLPFSGFLTVGYLVLDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWFYAFYKMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEVGVITFLSLAYFISGIADEVTR 314
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|570327817|gb|ETO75765.1| (hypothetical protein F444_08709 [Phytophthora parasitica P1976]) HSP 1 Score: 134.806 bits (338), Expect = 4.181e-32 Identity = 88/290 (30.34%), Postives = 137/290 (47.24%), Query Frame = 0 Query: 43 MYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPL--VSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASE 330 ++ + QGP+ G++SV +++S ++ E + V FYH G ++ + SD+ ++F G SD V E P + V SG + +C + + G + RNPYG LP YG LPF G +LV + ++ L+ +HR LL LH+ IL +LV+ TA S WF AF MN G P CCP+P + A++ + +T++R +LL++CLGYGI R L + E + LSL Y + + DE + Sbjct: 41 LFATDQGPILARTGNSSVTIDIS-GVNVTQEMAGWRLVVFFYHVDNYEDF----ETVAGKIELLACSDVEGMKFD-GMSD-VQRFVFTVANETTP---------TVSANVLHLVNSSGWTDTQIFVCAEDEGAATETLTFTGSMEVRNPYGLLPAVLYGMLPFSGFLTVGYLVLDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWFYAFYKMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEVGVITFLSLAYFISGIADEVTR 314
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|566024130|gb|ETI47041.1| (hypothetical protein F443_08653 [Phytophthora parasitica P1569] >gi|567961427|gb|ETK86969.1| hypothetical protein L915_08487 [Phytophthora parasitica] >gi|567990149|gb|ETL40383.1| hypothetical protein L916_08416 [Phytophthora parasitica] >gi|568019389|gb|ETL93537.1| hypothetical protein L917_08314 [Phytophthora parasitica] >gi|568049830|gb|ETM46796.1| hypothetical protein L914_08365 [Phytophthora parasitica] >gi|570951575|gb|ETP16832.1| hypothetical protein F441_08630 [Phytophthora parasitica CJ01A1] >gi|570985671|gb|ETP44889.1| hypothetical protein F442_08585 [Phytophthora parasitica P10297]) HSP 1 Score: 134.806 bits (338), Expect = 4.181e-32 Identity = 88/290 (30.34%), Postives = 137/290 (47.24%), Query Frame = 0 Query: 43 MYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPL--VSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASE 330 ++ + QGP+ G++SV +++S ++ E + V FYH G ++ + SD+ ++F G SD V E P + V SG + +C + + G + RNPYG LP YG LPF G +LV + ++ L+ +HR LL LH+ IL +LV+ TA S WF AF MN G P CCP+P + A++ + +T++R +LL++CLGYGI R L + E + LSL Y + + DE + Sbjct: 41 LFATDQGPILARTGNSSVTIDIS-GVNVTQEMAGWRLVVFFYHVDNYEDF----ETVAGKIELLACSDVEGMKFD-GMSD-VQRFVFTVANETTP---------TVSANVLHLVNSSGWTDTQIFVCAEDEGAATETLTFTGSMEVRNPYGLLPAVLYGMLPFSGFLTVGYLVLDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWFYAFYKMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEVGVITFLSLAYFISGIADEVTR 314
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|301088046|ref|XP_002996855.1| (Gpr7 transmembrane protein [Phytophthora infestans T30-4] >gi|262112175|gb|EEY70227.1| Gpr7 transmembrane protein [Phytophthora infestans T30-4]) HSP 1 Score: 134.806 bits (338), Expect = 5.325e-32 Identity = 88/291 (30.24%), Postives = 143/291 (49.14%), Query Frame = 0 Query: 43 MYGSGQGPLAWNNGDASVHLNLSLRLSTLTEEDYVNVS-VLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPL--VSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDEASE 330 ++ + QGP+ G++SV +++S +D S V+F++ + ++ A AG ++ + SD+ ++F G SD V A P + + V SG + +C + + +G + RNPYG LP YG LPF G +LV + ++ L+ +HR LL LH+ IL +LV+ TA S W AF MN G P CCP+P + A++ + +T++R +LL++CLGYGI R L + E + LSL Y + + DE + Sbjct: 41 LFATDQGPILARTGNSSVTIDIS---GVNVTQDMAGWSLVVFFYHVDNYEDFEAVAGK---IELLACSDVEGMKFD-GMSD-----VQRFVFTVANKSTPTLS-----ANVSHLVNSSGWTDTQIFVCAEDEGAATETLTFSGSMEVRNPYGLLPAVLYGMLPFSGFLTVGYLVLDVFFVFLLIRHRRQLLSLHWGILLILVMGTAASAVWLYAFYRMNKTGEPVCCPYPTTFLIAVILDTFVRTLARVILLIVCLGYGIVRSHLSRVEASVIAFLSLAYFVSGIADEVTR 314
BLAST of EWM20871.1 vs. NCBI_GenBank
Match: gi|813185333|ref|XP_012206838.1| (hypothetical protein SPRG_12731 [Saprolegnia parasitica CBS 223.65] >gi|641528210|gb|KDO22450.1| hypothetical protein SPRG_12731 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 132.88 bits (333), Expect = 2.248e-31 Identity = 92/287 (32.06%), Postives = 141/287 (49.13%), Query Frame = 0 Query: 43 MYGSGQGPLAWNNGDASVHLNLS-LRLSTLTEEDYVNVSVLFYHQKEAGKEGGAEAGTEGGVDYVPDSDLCALEFPPGASDRAMHTVMAHKVEAAPGEGPASTEWAARVEADYKVLESGVQNVLFQICPPL-VSVSEVGLAGELSFRNPYGFLPGRFYGYLPFEGARFFAFLVFFLVYLGLVCKHRGHLLRLHYAILSVLVIATAESLSWFLAFSHMNTRGTPYCCPFPAVVVSAMVFELVQKTVSRALLLLICLGYGIARPSLHKGEWLSLLTLSLLYLGATMLDE 327 M+GS GPL +G +SVHLN+S + S+ + V+F++Q + A A EG + S L + G MH + + G AST YK+ SG + L +C S + V G L+ RNPYG LP FYG LPF G +LV + L+C HR + L I +VL++ T S WF+A MN G P+ P P + ++A+ + +T +R +LL++CLGYGI + +L + + + ++ +SL Y G + D+ Sbjct: 53 MFGSNHGPLFAEHGSSSVHLNISGVNASSAMNGGRL---VVFHYQAD---NLNALADAEGNLALFACSQLQSELTMAG-----MHHLERREFPIVNGSVVASTT--------YKINSSGWIDSLVFVCSETHASQAAVPFTGTLTVRNPYGLLPAVFYGLLPFSGFLSLGYLVLAFFFAILLCLHRKEAIALQVGIFAVLLLGTVSSAIWFIALYEMNQVGQPFSWPLPPLYIAAVACDAGMRTFARMILLVVCLGYGIVKDTLPRLDKVLIVVMSLAYFGTGVADD 320 The following BLAST results are available for this feature:
BLAST of EWM20871.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|