EWM20879.1, cds9794 (CDS) Nannochloropsis gaditana

Overview
NameEWM20879.1
Unique Namecds9794
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:198387..199646 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20879.1
Productamp-binding enzyme family protein
Partialtrue
Orig transcript idgnl|cribi|Naga_100713g1.6224.mrna
GbkeyCDS
End range.
End range199646
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:198387..199646 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR000873AMP-dep_Synth/Lig
IPR025110AMP-bd_C
Homology
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|585100826|gb|EWM20879.1| (amp-binding enzyme family protein, partial [Nannochloropsis gaditana])

HSP 1 Score: 815.068 bits (2104), Expect = 0.000e+0
Identity = 419/419 (100.00%), Postives = 419/419 (100.00%), Query Frame = 0
Query:    1 GKGRGGRSLDTTELAVGAIRDLGISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVRAGLRKGSQESKASGLPAGLRSAL 419
            GKGRGGRSLDTTELAVGAIRDLGISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVRAGLRKGSQESKASGLPAGLRSAL
Sbjct:    1 GKGRGGRSLDTTELAVGAIRDLGISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVRAGLRKGSQESKASGLPAGLRSAL 419          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|740678669|ref|WP_038463958.1| (fatty-acid--CoA ligase [Arthrobacter sp. PAMC 25486] >gi|723607981|gb|AIY01357.1| feruloyl-CoA synthetase [Arthrobacter sp. PAMC 25486])

HSP 1 Score: 149.828 bits (377), Expect = 1.228e-36
Identity = 117/379 (30.87%), Postives = 160/379 (42.22%), Query Frame = 0
Query:   18 AIRDLGISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVR 396
            AI +   + ++LVPTM+  L+   + G          L S+  +L GG  +   +  RA+   P  R+ Q+Y  +EA   I+ L   LP          G  G  AP  +VA+LD++G+E                                                   G VGEI  +G H+M GYW  P A+A  L                                        RGG              WL TGDLG +D  G   +V RL D+I TG+E V S+EVE  L  H  V S+AV+G+PD+ +GE+V AVVVL      GQ    EEL  HC+ H+AG+KVPR FEF + LP +G+GK+ K  +R
Sbjct:  242 AIEEHKPTDVLLVPTMIQILVDHPDAGNYD-------LSSMQRMLYGGSVISEGVLKRAKERFPGVRMTQAYGQTEASPVITLL---LPDDHTGDRMRSG--GRAAPHCQVAILDLDGKEA------------------------------------------------ATGDVGEICAKGAHVMQGYWNNPAASAEAL----------------------------------------RGG--------------WLHTGDLGYIDAAGFVFVVDRLKDMIVTGSENVYSAEVENALSKHPAVASSAVIGVPDEKYGERVHAVVVLSP----GQNPTAEELQAHCKEHIAGYKVPRSFEFLEALPTSGAGKILKRELR 502          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|1011064261|ref|WP_062007312.1| (fatty-acid--CoA ligase [Arthrobacter alpinus] >gi|928487409|gb|ALE92748.1| fatty-acid--CoA ligase [Arthrobacter alpinus])

HSP 1 Score: 144.821 bits (364), Expect = 7.245e-35
Identity = 118/379 (31.13%), Postives = 161/379 (42.48%), Query Frame = 0
Query:   18 AIRDLGISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVR 396
            AI +   + ++LVPTM+  L+   + G          L S+  +L GG ++   +  R +   P  R+ Q+Y  +EA   I+ L   LP          G  G PAP  +VA+LD++G E                                          RP       G VGEI  +G H+M GYW            P+ S  +L                              RGG              WL TGDLG MD  G   +V RL D+I TG E V S+EVE  L  H  V S+AV+G+PD+ +GE+V AVVVL         A  EEL  HC+ H+AG+KVPR FEF + LP++G+GK+ K  +R
Sbjct:  242 AIEEHKPTDVLLVPTMIQVLVDHPDAGNYD-------LSSMERMLYGGSSISEGVLNRTKERFPGVRLTQAYGQTEAAPVITLL---LPDDHVGDRMRSG--GRPAPHCQVAILDLDGTEA-----------------------------------------RP-------GDVGEICAKGAHVMQGYWNN----------PEASAEAL------------------------------RGG--------------WLHTGDLGYMDAGGFVFVVDRLKDMIVTGGENVFSAEVENALSKHPAVASSAVIGVPDEKYGERVHAVVVLSP----DHSATAEELAAHCKEHIAGYKVPRSFEFLEALPMSGAGKILKRNLR 502          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|1011374104|ref|WP_062286869.1| (fatty-acid--CoA ligase [Arthrobacter alpinus] >gi|953320966|gb|ALO66249.1| fatty-acid--CoA ligase [Arthrobacter alpinus])

HSP 1 Score: 141.739 bits (356), Expect = 9.984e-34
Identity = 115/372 (30.91%), Postives = 160/372 (43.01%), Query Frame = 0
Query:   25 STLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVR 396
            + ++LVPTM+  L        +    G   L S++ +L GG ++   +  RA A  P  R+ Q+Y  +EA   I+ L   LP          G  G  AP  +VA+LD +G+E                   VP+                             G VGE+ T+G ++M GYW  P  +A  L                                        RGG              WL TGDLG +D  G   +V RL D+I TG E V  +EVE  L  H  V S+AV+G+PD+ +GE+V AVVVL      G+ A  EEL  HC+ H+AG+KVPR FEF + LP++G+GK+ K  +R
Sbjct:  249 TAMLLVPTMIQIL-------ADHPDAGNYDLSSLTRMLYGGSSISEGVLKRAMARFPGLRMTQAYGQTEASPVITLL---LPDDHHGDALRSG--GRAAPHSQVAILDFDGKE-------------------VPT-----------------------------GVVGEVCTKGANVMLGYWNNPDQSAQAL----------------------------------------RGG--------------WLHTGDLGYVDAQGFVYVVDRLKDMIITGGENVYCAEVENALSKHPAVASSAVIGVPDEKYGERVHAVVVLVP----GRKASAEELAAHCKEHIAGYKVPRSFEFPEALPMSGAGKILKRELR 502          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|494252977|ref|WP_007148529.1| (fatty-acid--CoA ligase [Alcanivorax sp. DG881] >gi|196193162|gb|EDX88121.1| AMP-binding enzyme, putative [Alcanivorax sp. DG881])

HSP 1 Score: 136.346 bits (342), Expect = 1.069e-31
Identity = 114/380 (30.00%), Postives = 159/380 (41.84%), Query Frame = 0
Query:   24 ISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPG-----SLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFR-QVLPVTGSGKVNKHMVRA 397
            ++  +LVPTM++ L ++       GR     + SI  +L G   +P  + + A   MP     Q Y  +EA   I+        +L P    PG     S G  A GVEV +LD    E D+                                            V   G VGEI  RGP++M GYW     TA  L                                           R+G           WL TGDLG MD DG   +V R  D++ +G E + S EVEG +  H  V+  AV+G+PD+ +GE V A+VVLRE    G+ A + E++ HCR  +AG+KVPR  +F+ + LPV+G+GKV K+ +RA
Sbjct:  247 VTNTLLVPTMVNLLASS-------GRIANYDVSSIKRMLYGASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIIT--------SLGPEHHIPGGEKLRSAGRAALGVEVVVLD----ENDQ--------------------------------------------VVSQGTVGEICARGPNVMLGYWGMESTTADTL-------------------------------------------RNG-----------WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPAVQECAVIGIPDERWGEAVHAIVVLRE----GEHASEAEIIEHCRERIAGYKVPRSVDFKAESLPVSGAGKVLKNELRA 505          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|551584945|ref|WP_022983817.1| (fatty-acid--CoA ligase [Alcanivorax sp. P2S70] >gi|550667772|gb|ERP93437.1| fatty-acid--CoA ligase [Alcanivorax sp. P2S70])

HSP 1 Score: 135.961 bits (341), Expect = 1.240e-31
Identity = 114/380 (30.00%), Postives = 159/380 (41.84%), Query Frame = 0
Query:   24 ISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPG-----SLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFR-QVLPVTGSGKVNKHMVRA 397
            ++  +LVPTM++ L ++       GR     + SI  +L G   +P  + + A   MP     Q Y  +EA   I+        +L P    PG     S G  A GVEV +LD    E D+                                            V   G VGEI  RGP++M GYW     TA  L                                           R+G           WL TGDLG MD DG   +V R  D++ +G E + S EVEG +  H  V+  AV+G+PD+ +GE V A+VVLRE    G+ A + E++ HCR  +AG+KVPR  +F+ + LPV+G+GKV K+ +RA
Sbjct:  247 VTNTLLVPTMVNLLASS-------GRIANYDVSSIKRMLYGASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIIT--------SLGPEHHIPGGEKLRSAGRAALGVEVVVLD----ENDQ--------------------------------------------VVSQGTVGEICARGPNVMLGYWGMESTTADTL-------------------------------------------RNG-----------WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPAVQECAVIGIPDERWGEAVHAIVVLRE----GEHASEAEIIEHCRERIAGYKVPRSVDFKAESLPVSGAGKVLKNELRA 505          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|737264806|ref|WP_035248742.1| (MULTISPECIES: fatty-acid--CoA ligase [Alcanivorax] >gi|686987806|gb|KGD60672.1| long-chain-fatty-acid-CoA ligase [Alcanivorax jadensis T9] >gi|1024417288|gb|KZX60833.1| fatty-acid--CoA ligase [Alcanivorax sp. HI0003] >gi|1024424063|gb|KZX66910.1| fatty-acid--CoA ligase [Alcanivorax sp. HI0007] >gi|1024451243|gb|KZX85848.1| fatty-acid--CoA ligase [Alcanivorax sp. HI0011] >gi|1024459913|gb|KZX92472.1| fatty-acid--CoA ligase [Alcanivorax sp. HI0013] >gi|1024477319|gb|KZY07302.1| fatty-acid--CoA ligase [Alcanivorax sp. HI0033] >gi|1024481784|gb|KZY10996.1| fatty-acid--CoA ligase [Alcanivorax sp. HI0035] >gi|1090724591|emb|SEF87845.1| long-chain acyl-CoA synthetase [Alcanivorax sp. DSM 26293])

HSP 1 Score: 135.961 bits (341), Expect = 1.424e-31
Identity = 114/380 (30.00%), Postives = 159/380 (41.84%), Query Frame = 0
Query:   24 ISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPG-----SLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFR-QVLPVTGSGKVNKHMVRA 397
            ++  +LVPTM++ L ++       GR     + SI  +L G   +P  + + A   MP     Q Y  +EA   I+        +L P    PG     S G  A GVEV +LD    E D+                                            V   G VGEI  RGP++M GYW     TA  L                                           R+G           WL TGDLG MD DG   +V R  D++ +G E + S EVEG +  H  V+  AV+G+PD+ +GE V A+VVLRE    G+ A + E++ HCR  +AG+KVPR  +F+ + LPV+G+GKV K+ +RA
Sbjct:  247 VTNTLLVPTMVNLLASS-------GRIANYDVSSIKRMLYGASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIIT--------SLGPEHHIPGGEKLRSAGRAALGVEVVVLD----ENDQ--------------------------------------------VVSQGTVGEICARGPNVMLGYWGMESTTADTL-------------------------------------------RNG-----------WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPAVQECAVIGIPDERWGEAVHAIVVLRE----GEHASEAEIIEHCRERIAGYKVPRSVDFKAESLPVSGAGKVLKNELRA 505          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|737249329|ref|WP_035233485.1| (fatty-acid--CoA ligase [Alcanivorax nanhaiticus] >gi|686991416|gb|KGD64248.1| long-chain-fatty-acid-CoA ligase [Alcanivorax nanhaiticus])

HSP 1 Score: 135.191 bits (339), Expect = 2.476e-31
Identity = 118/395 (29.87%), Postives = 164/395 (41.52%), Query Frame = 0
Query:    9 LDTTELAVGAIRDLGISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPG-----SLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFR-QVLPVTGSGKVNKHMVRA 397
             D  E+ +  I    ++  +LVPTM++ L ++       GR     + SI  +L G   +P  + + A   MP     Q Y  +EA   I+        +L P    PG     S G  A GVEV +LD    E D+                                            V   G VGEI  RGP++M GYW     TA  L                                           R+G           WL TGDLG MD DG   +V R  D++ +G E + S EVEG +  H  V+  AV+G+PD+ +GE V A+VVLRE    G+ A + E++ HCR  +AG+KVPR  EF+ + LPV+G+GKV K+ +RA
Sbjct:  233 FDVDEV-LAFIEQEKVTNTLLVPTMVNLLASS-------GRIANYDVSSIKRMLYGASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIIT--------SLGPEHHIPGGEKLRSAGRAALGVEVLVLD----ENDQ--------------------------------------------VVSQGTVGEICARGPNVMLGYWGMESTTADTL-------------------------------------------RNG-----------WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYGHPAVQECAVIGIPDERWGEAVHAIVVLRE----GERANEAEIIEHCRERIAGYKVPRSVEFKAESLPVSGAGKVLKNELRA 505          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|496216007|ref|WP_008930249.1| (MULTISPECIES: fatty-acid--CoA ligase [Alcanivorax] >gi|407764638|gb|EKF73109.1| long-chain-fatty-acid-CoA ligase [Alcanivorax hongdengensis A-11-3] >gi|1024523293|gb|KZY38981.1| fatty-acid--CoA ligase [Alcanivorax sp. HI0044] >gi|1024648106|gb|KZZ22621.1| fatty-acid--CoA ligase [Alcanivorax sp. HI0083])

HSP 1 Score: 135.191 bits (339), Expect = 3.016e-31
Identity = 117/395 (29.62%), Postives = 164/395 (41.52%), Query Frame = 0
Query:    9 LDTTELAVGAIRDLGISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLALPPALPPPLPPPG-----SLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVLREGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFR-QVLPVTGSGKVNKHMVRA 397
             D  E+ +  I    ++  +LVPTM++ L ++       GR     + SI  +L G   +P  + + A   MP     Q Y  +EA   I+        +L P    PG     S G  A GVEV +LD    E D+                                            V   G VGEI  RGP++M GYW     TA  L                                           R+G           WL TGDLG MD DG   +V R  D++ +G E + S EVEG +  H  V+  AV+G+PD+ +GE V A+VVLRE    G+ A + E++ HCR  +AG+KVPR  +F+ + LPV+G+GKV K+ +RA
Sbjct:  233 FDVDEV-LAFIEQEKVTNTLLVPTMVNLLASS-------GRIANYDVSSIKRMLYGASPMPEAVLISAMEQMPTVSFAQGYGQTEASPIIT--------SLGPEHHIPGGEKLRSAGRAALGVEVVVLD----ENDQ--------------------------------------------VVSQGTVGEICARGPNVMLGYWGMESTTADTL-------------------------------------------RNG-----------WLHTGDLGYMDEDGFVFIVDRAKDMVISGGENIFSVEVEGAIYSHPEVQECAVIGIPDERWGEAVHAIVVLRE----GEHASEAEIIEHCRERIAGYKVPRSVDFKAESLPVSGAGKVLKNELRA 505          
BLAST of EWM20879.1 vs. NCBI_GenBank
Match: gi|1101006482|ref|WP_071511474.1| (fatty-acid--CoA ligase [Mycobacterium malmoense] >gi|1100803730|gb|OIN79964.1| fatty-acid--CoA ligase [Mycobacterium malmoense])

HSP 1 Score: 129.413 bits (324), Expect = 3.241e-29
Identity = 116/389 (29.82%), Postives = 161/389 (41.39%), Query Frame = 0
Query:   18 AIRDLGISTLVLVPTMLSKLLAAVEGGGEGGREGTSVLPSISFLLVGGQALPLPLFLRARASMPQARVFQSYACSEACSSISFLPLAL--PPALPPPLPPPGSLGHPAPGVEVALLDVEGREEDRGADRERAGREGRFGPTVPSPSAPPDSSSSTETRRPGPGLRPRIFVDKVGKVGEIATRGPHLMNGYWRRPGATAAVLVYPQLSPASLPGSPPLPPLLLPSRPPTGTQAFGTPKKGGKRGGRSGGREASGETEGPWLCTGDLGVMDPDGRFRLVGRLADVIRTGAEKVMSSEVEGVLQMHHCVESAAVVGMPDDVFGEKVVAVVVL---REGAGDGQGAVKEELVRHCRRHLAGFKVPREFEFRQVLPVTGSGKVNKHMVRAGLRK 401
            AI D  ++ L+LVPTM+  L+   +  G         L S+  L  G   +P  L  RA  + P A + Q+Y  +E   + +FLP +    PAL        S G   P VEV ++D +  E                   VP+                             G++GE+  RG ++M GYW                                +RP     A            R G           W+ TGDL  MD  G   ++ RL D+I TG E V S+EVE  L  H  V +AAV+G+PDD +GE+V AV+VL   R  A +GQ  + E +  HCR  +AG+KVPR  EF   LP++G+GKV K  +R   R 
Sbjct:  242 AISDHRVTDLLLVPTMIQMLIDHPDTAGHD-------LSSLRHLAYGASPIPEALVERAAKAFPTAGLAQAYGMTELAPAATFLPASDHDKPALQR------SAGRALPHVEVRVVDADDNE-------------------VPT-----------------------------GEIGEVVVRGDNVMLGYW--------------------------------NRPDDTAAAV-----------RDG-----------WMHTGDLARMDEHGYLFIIDRLKDMIITGGENVYSAEVENALARHPAVAAAAVIGVPDDRWGERVHAVIVLRPDRAAAQEGQEGIAESIGEHCRALIAGYKVPRSMEFVTELPISGAGKVLKRELRERYRN 515          
The following BLAST results are available for this feature:
BLAST of EWM20879.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100826|gb|EWM20879.1|0.000e+0100.00amp-binding enzyme family protein, partial [Nannoc... [more]
gi|740678669|ref|WP_038463958.1|1.228e-3630.87fatty-acid--CoA ligase [Arthrobacter sp. PAMC 2548... [more]
gi|1011064261|ref|WP_062007312.1|7.245e-3531.13fatty-acid--CoA ligase [Arthrobacter alpinus] >gi|... [more]
gi|1011374104|ref|WP_062286869.1|9.984e-3430.91fatty-acid--CoA ligase [Arthrobacter alpinus] >gi|... [more]
gi|494252977|ref|WP_007148529.1|1.069e-3130.00fatty-acid--CoA ligase [Alcanivorax sp. DG881] >gi... [more]
gi|551584945|ref|WP_022983817.1|1.240e-3130.00fatty-acid--CoA ligase [Alcanivorax sp. P2S70] >gi... [more]
gi|737264806|ref|WP_035248742.1|1.424e-3130.00MULTISPECIES: fatty-acid--CoA ligase [Alcanivorax]... [more]
gi|737249329|ref|WP_035233485.1|2.476e-3129.87fatty-acid--CoA ligase [Alcanivorax nanhaiticus] >... [more]
gi|496216007|ref|WP_008930249.1|3.016e-3129.62MULTISPECIES: fatty-acid--CoA ligase [Alcanivorax]... [more]
gi|1101006482|ref|WP_071511474.1|3.241e-2929.82fatty-acid--CoA ligase [Mycobacterium malmoense] >... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9825rna9825Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications