EWM20886.1, cds9791 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|585100836|gb|EWM20885.1| (d-3-phosphoglycerate dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 850.507 bits (2196), Expect = 0.000e+0 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNKVGRAGEREGRREGGRAGERAVGSCIRVACPSILPLASTTSLHVRIRPCQGAPVASAQSRTRDLSSISPLPSVWRPAHRFLFTGEGLRERGNDRTLHAL 412 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNKVGRAGEREGRREGGRAGERAVGSCIRVACPSILPLASTTSLHVRIRPCQGAPVASAQSRTRDLSSISPLPSVWRPAHRFLFTGEGLRERGNDRTLHAL Sbjct: 76 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNKVGRAGEREGRREGGRAGERAVGSCIRVACPSILPLASTTSLHVRIRPCQGAPVASAQSRTRDLSSISPLPSVWRPAHRFLFTGEGLRERGNDRTLHAL 487
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|585100837|gb|EWM20886.1| (d-3-phosphoglycerate dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 847.425 bits (2188), Expect = 0.000e+0 Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNKVGRAGEREGRREGGRAGERAVGSCIRVACPSILPLASTTSLHVRIRPCQGAPVASAQSRTRDLSSISPLPSVWRPAHRFLFTGEGLRERGNDRTLHAL 412 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNKVGRAGEREGRREGGRAGERAVGSCIRVACPSILPLASTTSLHVRIRPCQGAPVASAQSRTRDLSSISPLPSVWRPAHRFLFTGEGLRERGNDRTLHAL Sbjct: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNKVGRAGEREGRREGGRAGERAVGSCIRVACPSILPLASTTSLHVRIRPCQGAPVASAQSRTRDLSSISPLPSVWRPAHRFLFTGEGLRERGNDRTLHAL 412
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|298705972|emb|CBJ29093.1| (D-3-phosphoglycerate dehydrogenase [Ectocarpus siliculosus]) HSP 1 Score: 329.717 bits (844), Expect = 6.429e-104 Identity = 164/319 (51.41%), Postives = 224/319 (70.22%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGHEPCLVSLDHYKNFPALNLHEGSVLKFRNKVGRAG 319 M+V+GFDP LP A ELGIQ DL VW +ADFITLHTPLTPDT++L+N ES+ QMK GV I+NCARGGI++E LL+AL +G V AALDVY EPP ES+++LL HP + CTPHLGASTEEAQVNVA+D+AVQMCDTLE K + GV NV YM++A A++PY LA+++G++ Q + V K+ L ++G +I + AR ++ A + G L T P ++N+PFL++E+G+ET + A+ SPY ++ITV +E G S++GSVFG EP LV +D++++FPA EG+++ FRN+ RAG Sbjct: 245 MEVIGFDPALPKDAAAELGIQLMDLPDVWAKADFITLHTPLTPDTQDLVNDESIAQMKDGVIIVNCARGGIINEDALLKALNSGKVASAALDVYSSEPPPESSRELLQHPRLVCTPHLGASTEEAQVNVARDVAVQMCDTLEGKAYTGVVNVSYMAVANEPAMQPYMILAERIGKMQAQISSSKVVKVGLRTYGGKAANIEANSARQVILATVMKGLLQYTKECKTAPSLINSPFLSKEMGIETSIDDKIHAVL-VNSPYTNVITVDITLEDGETHSISGSVFGEEPNLVQIDNHRSFPAFK-PEGTIVMFRNE-DRAG 560
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|585113167|gb|EWM30503.1| (phosphoserine aminotransferase [Nannochloropsis gaditana]) HSP 1 Score: 233.802 bits (595), Expect = 5.443e-65 Identity = 132/319 (41.38%), Postives = 199/319 (62.38%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQF-AMGTVWKITLASWGQTDISITS-PDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEG--GGATSVTGSVF-GHEPCLVSLDHYK-NFPALNLHEGSVLKFRN 313 M +GFDP++ AAA + GI+ L+++W +ADFITLHTPLT DT+ LIN ++L++ KKGV IINCARGGI+ E LLEALE+GHVGGA+LDVYE EPPGE+ + L+ HP + TPHLGA+T++AQV VAKDIA+Q+ D LE KDFVGV N + A+ + PY LA+++G + Q G + +I + G+ D++++ D+ + + + L QD + +NA LA ++G+ ++ + + + + I V ++G + S++G+VF G E + +D +K + P GSV+ F N Sbjct: 194 MTTIGFDPIVSAAAARSAGIEPVPLDELWAKADFITLHTPLTKDTRYLINADTLKKCKKGVRIINCARGGIIDEKALLEALESGHVGGASLDVYETEPPGEAERPLINHPRIVSTPHLGANTKDAQVRVAKDIAIQLSDILEQKDFVGVVNAPNIDFARKSQLIPYIQLAEKIGSLQAQLIGSGKIKRINVTMQGK-DVAVSEMSDSIKIAVLKGTLSHLLDQDVN-----FLNAGPLASDMGLSVNSML----VERQDTQFSNTIKVDFEMDGFLNFSRSISGTVFGGSELRIFEIDGFKTDIPP----TGSVVFFNN 498
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|1209261506|ref|WP_088311570.1| (phosphoglycerate dehydrogenase [Novosphingobium sp. B 225]) HSP 1 Score: 216.853 bits (551), Expect = 1.505e-61 Identity = 135/299 (45.15%), Postives = 175/299 (58.53%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQ-DTHGTLPGIVNAPFLAEELGVET-EALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGH-EPCLVSLDHYK 296 MKVV FDP L E+G++K DL+ + +ADFITLHTPLT T+N+++RE+L + KKGV IINCARGG++ E L +AL++G V GAALDV++ EP ES L PN CTPHLGAST EAQVNVA +A QM D L + NV +S + +RPY LA+QLG + Q G + +I++ + G P + A L GFL TQ DT +VNAPFLA+E G+E E TE A Y +LI V + G SV G++F + EP LV L K Sbjct: 166 MKVVAFDPFLTPERAVEMGVEKADLDTLLGKADFITLHTPLTDQTRNILSRENLAKTKKGVRIINCARGGLIDEAALKDALDSGQVAGAALDVFQTEPAKES--PLFGTPNFICTPHLGASTNEAQVNVALQVAEQMADYLVNGGVTNALNVPSLSAEEAPKLRPYMALAEQLGSLVGQLTTGAIPRISIHAEGAAAELNIKP-----IVAAVLCGFLRTQSDT----VNMVNAPFLAKERGMEVREVKTE------KAGDYHTLIRVSVKTD-AGERSVAGTLFSNAEPRLVELFGIK 446
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|750432948|ref|WP_040714837.1| (phosphoglycerate dehydrogenase [Novosphingobium tardaugens]) HSP 1 Score: 212.616 bits (540), Expect = 5.673e-60 Identity = 131/294 (44.56%), Postives = 176/294 (59.86%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVET-EALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGH-EPCLVSL 292 MKVV FDP L ELGI+K DL+++ +ADFITLHTPLT T+N++++E++ + KKGV IINCARGG+V E L EAL++GHV GAALDV+ EP ES L PN TPHLGAST EAQVNVA +A QM D L + N+ +S + ++PY LA++LG + Q G++ +I++ + G + T +A+ ++ A L GFL Q + VNAPFLA+E G+E E TE Y +LI V E G SV G++F + EP LV L Sbjct: 166 MKVVAFDPFLSPERALELGIEKVDLDELLARADFITLHTPLTDQTRNILSKENIAKTKKGVRIINCARGGLVDEAALKEALDSGHVAGAALDVFVTEPAKES--PLFGTPNFVSTPHLGASTSEAQVNVALQVAEQMSDFLLTGGVTNALNMPSLSAEEAPKLKPYMALAEKLGSLVGQLTTGSLARISVHTEG----AATELNAKPIV-AAVLAGFLRVQSDSVNM---VNAPFLAKERGMEVREVKTEREG------DYHTLIRVSVKTE-AGERSVAGTLFSNSEPRLVEL 442
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|540740273|dbj|GAD47703.1| (D-3-phosphoglycerate dehydrogenase [Novosphingobium tardaugens NBRC 16725]) HSP 1 Score: 213.001 bits (541), Expect = 5.926e-60 Identity = 131/294 (44.56%), Postives = 176/294 (59.86%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVET-EALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGH-EPCLVSL 292 MKVV FDP L ELGI+K DL+++ +ADFITLHTPLT T+N++++E++ + KKGV IINCARGG+V E L EAL++GHV GAALDV+ EP ES L PN TPHLGAST EAQVNVA +A QM D L + N+ +S + ++PY LA++LG + Q G++ +I++ + G + T +A+ ++ A L GFL Q + VNAPFLA+E G+E E TE Y +LI V E G SV G++F + EP LV L Sbjct: 182 MKVVAFDPFLSPERALELGIEKVDLDELLARADFITLHTPLTDQTRNILSKENIAKTKKGVRIINCARGGLVDEAALKEALDSGHVAGAALDVFVTEPAKES--PLFGTPNFVSTPHLGASTSEAQVNVALQVAEQMSDFLLTGGVTNALNMPSLSAEEAPKLKPYMALAEKLGSLVGQLTTGSLARISVHTEG----AATELNAKPIV-AAVLAGFLRVQSDSVNM---VNAPFLAKERGMEVREVKTEREG------DYHTLIRVSVKTE-AGERSVAGTLFSNSEPRLVEL 458
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|1055049344|ref|WP_066799224.1| (phosphoglycerate dehydrogenase [Sphingomonas soli]) HSP 1 Score: 211.846 bits (538), Expect = 9.999e-60 Identity = 126/294 (42.86%), Postives = 175/294 (59.52%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVET-EALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGH-EPCLVSL 292 MKV+ +DP L E+G++K +L+++ +ADFITLHTPLT T+N++++E+L + KKGV IINCARGG++ E L E LE+GH+ GAALDV+ +EP ES L PN TPHLGAST EAQVNVA +A QM D L S NV +S + ++PY LA+ LG + Q GT+ ++++ S G + T + + ++ A L GFL H +VNAPFLA+E G+E E TE Y +L+ V E G SV G++FG+ +P LV L Sbjct: 164 MKVIAYDPFLTPERAIEMGVEKVELDQLLARADFITLHTPLTDQTRNILSKENLARTKKGVRIINCARGGLIDEAALKEGLESGHIAGAALDVFVQEPAKES--PLFGTPNFISTPHLGASTSEAQVNVAIQVAEQMADYLVSGGITNALNVPSLSAEEAPRVKPYMALAETLGSLVGQLTTGTIPRVSIHSEG----AATEVNQKPIVSA-VLAGFLR---VHSDTVNMVNAPFLAKERGIEVREVKTEKEG------DYHTLLRVSVKTE-AGERSVAGTLFGNGQPRLVEL 440
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|936198031|ref|WP_054532173.1| (phosphoglycerate dehydrogenase [Erythrobacter sp. SG61-1L] >gi|934043798|gb|KPL68188.1| 3-phosphoglycerate dehydrogenase [Erythrobacter sp. SG61-1L]) HSP 1 Score: 211.846 bits (538), Expect = 1.261e-59 Identity = 130/294 (44.22%), Postives = 177/294 (60.20%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVET-EALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGH-EPCLVSL 292 MKVV +DP L A ELGI+K +L+ + +ADFITLHTPLT T+N++++E++ + KKGV IINCARGG+V E L EAL++GHV GAALDV+ EP ES L PN CTPHLGAST EAQVNVA +A Q+ D L + N+ +S + ++PY LA++LG + Q G+V +I++ + G + T +A+ ++ A L GFL H +VNAPFLA+E G+E E TE Y +LI V + G SV G++F + EP LV L Sbjct: 166 MKVVAYDPFLSAERAVELGIEKVELDDLLARADFITLHTPLTDQTRNILSKENIAKTKKGVRIINCARGGLVDEAALKEALDSGHVAGAALDVFAVEPAKES--PLFGTPNFICTPHLGASTNEAQVNVALQVADQLSDFLVNGGVTNALNMPSLSAEEAPKLKPYMALAEKLGSLVGQLTHGSVPRISIHTEG----AATELNAKPIV-AAVLAGFLR---VHSDTVNMVNAPFLAKERGLEVREVKTEREG------DYHTLIRVSVKTD-AGERSVAGTLFSNSEPRLVEL 442
BLAST of EWM20886.1 vs. NCBI_GenBank
Match: gi|1168741714|ref|WP_080313776.1| (phosphoglycerate dehydrogenase [Rhodothermaceae bacterium RA] >gi|1167576506|gb|ARA93366.1| phosphoglycerate dehydrogenase [Rhodothermaceae bacterium RA]) HSP 1 Score: 210.305 bits (534), Expect = 4.838e-59 Identity = 129/315 (40.95%), Postives = 179/315 (56.83%), Query Frame = 0 Query: 1 MKVVGFDPVLPAAAFKELGIQKCDLEKVWPQADFITLHTPLTPDTKNLINRESLQQMKKGVHIINCARGGIVHEMDLLEALEAGHVGGAALDVYEKEPPGESTKKLLAHPNVSCTPHLGASTEEAQVNVAKDIAVQMCDTLESKDFVGVCNVGYMSIAQNHAIRPYADLAQQLGRVATQFAMGTVWKITLASWGQTDISITSPDARALLKAQALVGFLSTQDTHGTLPGIVNAPFLAEELGVETEALTEAPALASAASPYRSLITVVAHVEGGGATSVTGSVFGH-EPCLVSLDHYK-NFPALNLHEGSVLKFRN 313 M V+GFDPVL A + LGI+ L++++ ++D ITLHTPL T+ L+NRE+L + K GV I+NCARGGIV E LLEALE+GHVGGAALDVY +EPP E+ ++L+ HP V TPH+ AST EAQ VA I Q+ L+ + N + +A ++PY LA LGR+ +Q G++ ++T+ G T + A+LK G LS + ++NAPFLA E+G+ E S Y +LI V G V G++FG EP LV +D Y+ P EG +L ++N Sbjct: 167 MHVIGFDPVLAPDAAERLGIELVSLDELFERSDVITLHTPLNDATRGLLNRETLARCKPGVRIVNCARGGIVDEEALLEALESGHVGGAALDVYSQEPPPEALQRLIQHPKVVATPHIAASTAEAQQKVAVQITEQVILALKGEPVSTPVNAMAIRMAAQREVQPYLRLADALGRIGSQLIEGSLHRVTVRCAGDVPRRYTEVLSVAVLK-----GVLSRWASDPV--NLINAPFLAREMGLAVEE-----QRGSTTDSYTNLIE-VELATSQGTRCVAGTIFGAGEPRLVQVDTYRLEIPP----EGHLLFYQN 464 The following BLAST results are available for this feature:
BLAST of EWM20886.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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