EWM20897.1, cds9777 (CDS) Nannochloropsis gaditana

Overview
NameEWM20897.1
Unique Namecds9777
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:159911..160598 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20897.1
Producthypothetical protein
Partialtrue
Orig transcript idgnl|cribi|Naga_101411g1.2364.mrna
GbkeyCDS
End range.
End range160598
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:159911..160598 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM20897.1 vs. NCBI_GenBank
Match: gi|585100850|gb|EWM20897.1| (hypothetical protein Naga_101411g1, partial [Nannochloropsis gaditana])

HSP 1 Score: 430.639 bits (1106), Expect = 5.136e-152
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0 
Query:    1 MTTTEGEGSAVAPAPSKTASTATSTSSSSSPAPSATAVKPRVFTSRNLNPTLQAVASKSEAQAPRVALPGSTSRLTVINKPFPSPEEPGPGPGENGERGKGGGFRGRPSSWVDASLAASRASLGAPVGGGWRGKEGGRTEARGGGTEAREAGSQGRLFPLPGPGPASTDGEGPRQADEGPLANYRSPQSKGDGPSSLPPSLPSSLPPYDPSSSRAGQGKSGPPVERRTL 229
            MTTTEGEGSAVAPAPSKTASTATSTSSSSSPAPSATAVKPRVFTSRNLNPTLQAVASKSEAQAPRVALPGSTSRLTVINKPFPSPEEPGPGPGENGERGKGGGFRGRPSSWVDASLAASRASLGAPVGGGWRGKEGGRTEARGGGTEAREAGSQGRLFPLPGPGPASTDGEGPRQADEGPLANYRSPQSKGDGPSSLPPSLPSSLPPYDPSSSRAGQGKSGPPVERRTL
Sbjct:    1 MTTTEGEGSAVAPAPSKTASTATSTSSSSSPAPSATAVKPRVFTSRNLNPTLQAVASKSEAQAPRVALPGSTSRLTVINKPFPSPEEPGPGPGENGERGKGGGFRGRPSSWVDASLAASRASLGAPVGGGWRGKEGGRTEARGGGTEAREAGSQGRLFPLPGPGPASTDGEGPRQADEGPLANYRSPQSKGDGPSSLPPSLPSSLPPYDPSSSRAGQGKSGPPVERRTL 229
The following BLAST results are available for this feature:
BLAST of EWM20897.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100850|gb|EWM20897.1|5.136e-152100.00hypothetical protein Naga_101411g1, partial [Nanno... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9808rna9808Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications