EWM20918.1, cds9753 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20918.1 vs. NCBI_GenBank
Match: gi|585100874|gb|EWM20918.1| (Major facilitator superfamily [Nannochloropsis gaditana]) HSP 1 Score: 541.962 bits (1395), Expect = 0.000e+0 Identity = 272/272 (100.00%), Postives = 272/272 (100.00%), Query Frame = 0 Query: 1 MEPTPVTAILPRGDRTFQGRPTLFQGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKLLTLHSEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLADAFVEARTWALWTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGSVANAAQEARLPVLTFLFLTCGYLVSFLALRGVPRAALEGECNLLNVEGVDFPPIRLDEITIVCKECLYFKKWLQFKADE 272 MEPTPVTAILPRGDRTFQGRPTLFQGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKLLTLHSEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLADAFVEARTWALWTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGSVANAAQEARLPVLTFLFLTCGYLVSFLALRGVPRAALEGECNLLNVEGVDFPPIRLDEITIVCKECLYFKKWLQFKADE Sbjct: 1 MEPTPVTAILPRGDRTFQGRPTLFQGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKLLTLHSEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLADAFVEARTWALWTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGSVANAAQEARLPVLTFLFLTCGYLVSFLALRGVPRAALEGECNLLNVEGVDFPPIRLDEITIVCKECLYFKKWLQFKADE 272
BLAST of EWM20918.1 vs. NCBI_GenBank
Match: gi|1160558981|ref|XP_020432042.1| (hypothetical protein PPL_06742 [Polysphondylium pallidum PN500] >gi|281205733|gb|EFA79922.1| hypothetical protein PPL_06742 [Polysphondylium pallidum PN500]) HSP 1 Score: 79.7221 bits (195), Expect = 2.548e-13 Identity = 56/204 (27.45%), Postives = 100/204 (49.02%), Query Frame = 0 Query: 18 QGRPTLFQGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKL---LTLHSEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLA-DAFVEARTWALWTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGSVANAAQEARLPVLTFLFLTCGYLV 217 Q +L +G+R + +++ L+L+ S+ SF NGGL LS L L++ G M E+ I + G F F+ L + +G K+ +LG + +G++V PL ++ +W V + + +M ++ G ++ A P +QG+TQG + SL+S L P + G++ + +P L F L+ YL+ Sbjct: 301 QKDFSLIEGLRILSKDKKIMMLLLLGSVNSFSNGGLLLSFVLFASLSIEHRGLGMDASENGIIFTILGFVGFLFQITFFKRLSKSIGLKKQYLLGTVLLCIGMMVFPLTYTGYLMQGKAMVWVLICIIVPLTSIGFMQCLPIVGGMVANAAKPELQGLTQGTSQSLNSLLRSFGPAISGAIFTLSVTNSIPFLLFAILSFTYLI 504
BLAST of EWM20918.1 vs. NCBI_GenBank
Match: gi|831777862|ref|XP_012755235.1| (hypothetical protein SAMD00019534_053100 [Acytostelium subglobosum LB1] >gi|735855867|dbj|GAM22135.1| hypothetical protein SAMD00019534_053100 [Acytostelium subglobosum LB1]) HSP 1 Score: 75.8702 bits (185), Expect = 6.679e-12 Identity = 54/199 (27.14%), Postives = 100/199 (50.25%), Query Frame = 0 Query: 23 LFQGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKL---LTLHSEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLA--DAFVEARTWALWTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGSVANAAQEARLPVLTFLFLTCGYL 216 L++G++ + ++V L+++ S+ SF NGGL L+ L L++ G M P E+ I + G + F F+ L R LG KR ++G + LG++ PL ++ + +W + V + + +M ++ G I+ + P +QG+TQG A S +S L P + G++ + + + L F L+ Y+ Sbjct: 376 LWEGLKSMAKDRKIVMLLILGSVNSFNNGGLLLAFVLFSSLSIEHRGLGMDPFENGIIFSVLGFFGFIFQITFFKRLSRTLGLKRQYLMGSMLLCLGMMTFPLTFMGYLIQGKA-TVWVILMIIVPITSVGFMQCLPIVGGMIANASRPELQGLTQGTAQSANSLLRSFGPAISGAIFTFSIKYSVSWLLFFVLSVIYV 573
BLAST of EWM20918.1 vs. NCBI_GenBank
Match: gi|330802937|ref|XP_003289468.1| (hypothetical protein DICPUDRAFT_153859 [Dictyostelium purpureum] >gi|325080469|gb|EGC34024.1| hypothetical protein DICPUDRAFT_153859 [Dictyostelium purpureum]) HSP 1 Score: 75.0998 bits (183), Expect = 1.288e-11 Identity = 53/197 (26.90%), Postives = 100/197 (50.76%), Query Frame = 0 Query: 25 QGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKL---LTLHSEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLAD-AFVEARTWALWTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGSVANAAQEARLPVLTFLFLTCGYLV 217 G+R +++ ++ LI+V L S+ NGGL LS+ L L++ +G +P + I + G + + LF+ L +G KR +G++ S+G+ + PL ++++ T +W SV + + +M L+ I +QG+TQG S++S L P + G++ + + +P L F+ L+ Y+V Sbjct: 394 DGMRMIINDRAVLLLIVVGGLNSYSNGGLLLSLVLFSALSIDLKGLGFEPSGTGIIFTILGFFGFVWQVTLFKKLSLTIGLKRQFTMGMILLSIGMALFPLTYVGYIKSGTTMVWVLIFISVPIISVGFMNGLPLVSAMIGTVCRSEIQGLTQGTTQSINSMLRSFGPTLSGALFSWSSNRSIPWLLFINLSIIYVV 590
BLAST of EWM20918.1 vs. NCBI_GenBank
Match: gi|470239490|ref|XP_004351714.1| (hypothetical protein DFA_09814 [Dictyostelium fasciculatum] >gi|328866611|gb|EGG14994.1| hypothetical protein DFA_09814 [Dictyostelium fasciculatum]) HSP 1 Score: 74.3294 bits (181), Expect = 1.939e-11 Identity = 50/176 (28.41%), Postives = 88/176 (50.00%), Query Frame = 0 Query: 22 TLFQGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKL---LTLHSEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLA-DAFVEARTWALWTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGS 193 TL +G++ + LV L ++ S+ S+ NGGL LS+ L L G M P E+ I + G + F F+ L R++G K+ +LG + ++G+ + PL ++ +W + V + + +M ++ G I+ + +QG+TQG A SL+S L P + G+ Sbjct: 362 TLKEGLKLLAQDHSLVLLFIIGSINSYNNGGLLLSIVLYASLPTDKHGLGMDPSENGIIFSVLGLFGFLFQITFFKKLSRKIGLKKQYLLGSMLLAVGMAIFPLTFMGYIVQGKAMVWVLLMIIVPINSIGFMQCLPIVQGMIANASRTELQGLTQGTAQSLNSLLRSFGPTISGA 537
BLAST of EWM20918.1 vs. NCBI_GenBank
Match: gi|1013939686|gb|KYQ93375.1| (hypothetical protein DLAC_06052 [Dictyostelium lacteum]) HSP 1 Score: 73.559 bits (179), Expect = 3.392e-11 Identity = 55/211 (26.07%), Postives = 99/211 (46.92%), Query Frame = 0 Query: 22 TLFQGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKLL---TLHSEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLA-DAFVEARTWALWTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGSVANAAQEARLPVLTFLFLTCGYLVSFLALRGVPRA 228 T QG+R ++ LV L+++ + SF NGGL L + L + G P ++ + + G F F+ L +G KR +LG+ +G+ + PL ++ +W + V + +M ++ G ++ ++P +QG+TQG A SLSS L P V G + A+ + + L F+ L+ Y+ +A +P + Sbjct: 386 TFTQGMRVIIQDRGLVLLLIIGGVNSFNNGGLLLGIVLFCSTAITDRGLGFGPPQTGVVFTILGFAGFFFQILFFKRLSASIGLKRQYILGMALLCVGIALFPLTFTGYLIQGEALVWVWIGIIIPVISIGFMQGLPIVQGMVANASNPQIQGLTQGTAQSLSSFLRAFGPAVSGGIFTASIKNNITWLLFIVLSVLYVFIAIASLWIPES 596
BLAST of EWM20918.1 vs. NCBI_GenBank
Match: gi|66806743|ref|XP_637094.1| (hypothetical protein DDB_G0287843 [Dictyostelium discoideum AX4] >gi|60465483|gb|EAL63568.1| hypothetical protein DDB_G0287843 [Dictyostelium discoideum AX4]) HSP 1 Score: 60.4622 bits (145), Expect = 8.078e-7 Identity = 55/210 (26.19%), Postives = 105/210 (50.00%), Query Frame = 0 Query: 11 PRGDRTFQGRPTLFQGVRYVLSSPRLVRLILVLSLTSFLNGGLFLSVKLLTLH---SEGFDMQPRESSTILLLFGCWAMAFNACLFRPLVRRLGPKRANMLGLLGTSLGVLVLPLADAFVEARTWAL-WTCTVASVLVFASSYMLVNSLLVGFISAHASPSMQGITQGLAVSLSSSLSGLEPVVLGSVANAAQEARLPVLTFLFLTCGYL 216 P+ D+TF+ +G++ +L L+ L++V L SF NGGL LS+ L + + G + S I + G + + LF+ + R G KR +G++ S+G+ + PL+ + + L W V + + +M ++ G ++ ++P +QG+TQG S++S L P + G++ +A+ P + F+ L+ Y+ Sbjct: 405 PKKDKTFK------EGMQIILKDRGLLLLMVVGGLNSFNNGGLLLSLVLFSSAPTVNRGLGLDSMGSGIIFTILGFFGFLWQILLFKKVSGRFGLKRQYTVGMILLSIGMALFPLSYVAWNIQGYPLVWVTIGIVVPIISVGFMSGLPIVQGMVANCSNPEIQGLTQGSTQSINSMLRSFGPAISGAIFSASTAHSQPWVLFIVLSIIYV 608 The following BLAST results are available for this feature:
BLAST of EWM20918.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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