EWM20930.1, cds9752 (CDS) Nannochloropsis gaditana

Overview
NameEWM20930.1
Unique Namecds9752
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:101785..102272 +
Alignment locationKK037256.1:102389..102502 +
Alignment locationKK037256.1:102567..102582 +

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Properties
Property NameValue
Protein idEWM20930.1
ProductMajor facilitator superfamily domain, general substrate transporter
Orig transcript idgnl|cribi|Naga_100061g11.8563.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:101785..102272 +
KK037256.1supercontigKK037256.1:102389..102502 +
KK037256.1supercontigKK037256.1:102567..102582 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
Homology
[Close]
BLAST of EWM20930.1 vs. NCBI_GenBank
Match: gi|585100886|gb|EWM20930.1| (Major facilitator superfamily domain, general substrate transporter [Nannochloropsis gaditana])

HSP 1 Score: 425.631 bits (1093), Expect = 6.405e-151
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0 
Query:    1 MKTRGPDKGTSSSEGPERGVELENDERGMSDTYQGPVPNTSTKPLLLPLSMTSLDVNSAASKHKGDALILSGEPHTDLSPAMAVAEHKGTARYRELLYVYLAIVADAVTSNVMAPYAQEWVLHTFQTNNIGLYSGILVGSMAFARALSSPFFGWLSDSIGRRLDCGDRRYWRFGHRAGAKGGLRRQQSSLAGCQDSHIHDRRLYL 205
            MKTRGPDKGTSSSEGPERGVELENDERGMSDTYQGPVPNTSTKPLLLPLSMTSLDVNSAASKHKGDALILSGEPHTDLSPAMAVAEHKGTARYRELLYVYLAIVADAVTSNVMAPYAQEWVLHTFQTNNIGLYSGILVGSMAFARALSSPFFGWLSDSIGRRLDCGDRRYWRFGHRAGAKGGLRRQQSSLAGCQDSHIHDRRLYL
Sbjct:    1 MKTRGPDKGTSSSEGPERGVELENDERGMSDTYQGPVPNTSTKPLLLPLSMTSLDVNSAASKHKGDALILSGEPHTDLSPAMAVAEHKGTARYRELLYVYLAIVADAVTSNVMAPYAQEWVLHTFQTNNIGLYSGILVGSMAFARALSSPFFGWLSDSIGRRLDCGDRRYWRFGHRAGAKGGLRRQQSSLAGCQDSHIHDRRLYL 205
The following BLAST results are available for this feature:
BLAST of EWM20930.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100886|gb|EWM20930.1|6.405e-151100.00Major facilitator superfamily domain, general subs... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9783rna9783Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications