EWM20925.1, cds9751 (CDS) Nannochloropsis gaditana

Overview
NameEWM20925.1
Unique Namecds9751
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:101244..101370 -
Alignment locationKK037256.1:100120..100990 -
Alignment locationKK037256.1:99610..99901 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20925.1
Productcellulase 2
Orig transcript idgnl|cribi|Naga_100061g12.8558.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:101244..101370 -
KK037256.1supercontigKK037256.1:100120..100990 -
KK037256.1supercontigKK037256.1:99610..99901 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR013781Glyco_hydro_catalytic_dom
IPR001547Glyco_hydro_5
Homology
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|585100881|gb|EWM20925.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 884.789 bits (2285), Expect = 0.000e+0
Identity = 429/429 (100.00%), Postives = 429/429 (100.00%), Query Frame = 0
Query:    1 MSLDNATGLTALKGPLTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLGTRKAPVRGAGESGRSEAAEYRYELGVPTPDLTLKTSPASQTSGCCGCFGQEARRR 429
            MSLDNATGLTALKGPLTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLGTRKAPVRGAGESGRSEAAEYRYELGVPTPDLTLKTSPASQTSGCCGCFGQEARRR
Sbjct:    1 MSLDNATGLTALKGPLTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLGTRKAPVRGAGESGRSEAAEYRYELGVPTPDLTLKTSPASQTSGCCGCFGQEARRR 429          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|585108543|gb|EWM26490.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 325.094 bits (832), Expect = 6.821e-104
Identity = 159/371 (42.86%), Postives = 226/371 (60.92%), Query Frame = 0
Query:   16 LTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGI---------WGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLGTRK 377
            L WTSE   +L+N + F +KG+++FGFETP++  HGLW   S T       L    FNA+RLPFS  LAL  +           +  L  LT+ +++  ++++A + G+++MLD HRL+ D  I +LWYD+ Y    +  +WD +L  F   WN+FA+DLKNEPHG  +WGSG+A TDW  A+E +  ++   HP ++GL FV G                WWGG+   V+E P+D+GS  LN+R+VY+PHVYGPD F Q YF + +FPDN+P +W   W F+    + AVVV EWGG    +D  WQ+  A++L ++ + D FYWCLNPNSGDTGG+L  D+ T   +KL LL  VQP P+ +   G+ +
Sbjct:   69 LDWTSEGGEILLNGQPFHLKGVSYFGFETPNEVPHGLW---SVTRDQIFGFLRNESFNAVRLPFSTALALEPNKKVNANTI---EKELHDLTALELIGNIIDKAAEYGILIMLDMHRLNEDF-IPELWYDDKYSMDDVKEAWDNLLTAFGDRWNLFAIDLKNEPHGVATWGSGKATTDWNTAAEELATYLYKKHPQYKGLVFVEGTQLASAKHHKLDKNNKWWGGDLEGVQEFPIDLGSDALNKRLVYSPHVYGPDAFVQPYFEAKNFPDNMPDIWKKQWAFVEEQTDRAVVVGEWGGRYENQDKIWQDSFAKFLVDECLEDTFYWCLNPNSGDTGGLLDYDFLTPMPKKLALLAKVQPHPTFITVKGSDQ 432          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|470501173|ref|XP_004347125.1| (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440800708|gb|ELR21743.1| cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 307.375 bits (786), Expect = 4.015e-96
Identity = 160/372 (43.01%), Postives = 218/372 (58.60%), Query Frame = 0
Query:   16 LTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISD-LWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGG----GGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLGTRKAPVRG 382
            L +TS +  + +N + F++KG +WFGFET +K VHGLW   S++  + LD LA + FNAIR+PF   L L L+   P      A+  L  L+S Q+MDK+V+ A  RG+++M D H   PD  I D  WY+    E  ++  W  +L R+K  WNVFA D+KNEP+   +WG+G   TDW  A  RI   IAA+    R L FV G+          +WG N   VR HPV + +     ++VY+PHVYGP V+ Q YFS  +FP N+PA+WD H+GF+     +AVV+ EWGG   G +  W E +  YL  K M D F+WCLNPNSGDTGG+L +DW+T  + KL LL  V P P++       +  V G
Sbjct:   45 LNFTSAQGALWLNGQPFKLKGTSWFGFETGNKVVHGLW--TSRSYLNLLDFLATNNFNAIRIPF--YLDLVLNDAQPSSINYGANPDLQGLSSMQVMDKVVQAAAARGLLIMFDLHSFLPDTNIQDNTWYNGANPESKVISGWTKLLQRYKDQWNVFAADIKNEPYA-ATWGTGNTGTDWNLAVARIADAIAASVSS-RFLIFVEGVASSPACTDACFWGENLIGVRTHPVQLRNP---SKLVYSPHVYGPSVYGQPYFSVGNFPANMPAIWDTHFGFIPSTTGSAVVIGEWGGHYTGSNQVWLEAMGNYLLSKRMTDQFFWCLNPNSGDTGGLLQNDWTTPEQSKLTLLAKVVPAPTKFTTNANGQVCVSG 407          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|470399635|ref|XP_004335429.1| (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440792188|gb|ELR13416.1| cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 307.375 bits (786), Expect = 1.947e-95
Identity = 164/379 (43.27%), Postives = 222/379 (58.58%), Query Frame = 0
Query:   16 LTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISD-LWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGG----GGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRLLPLGTRKAPVRGAGESGRS 389
            L +TSE   + VN ++F +KG +WFGFET    VHGLW   + + T +LD LA  GFNAIRLPF ++L L   +         A+A L  L S Q+MDK+++ A  RG++VMLD H   PD+ +SD LWY+    E  ++  W  +L R+K  WNV A DLKNEPH   +WG+G   TDW   + R+   IA+A  D R L FV G+          +WG N    R +PV +       ++VY+PHVYGP+VF QSYFS+ +FP N+PA+W+ HWGF+    + A V+ EWGG   GKD  W E +A YL+ K     F+WCLNPNSGDTGG+L DDWS+    KL LL D+   P++       +  + G  +   S
Sbjct:   37 LNFTSEAGKLWVNGQRFHLKGTSWFGFETAACTVHGLW---ANSYTFFLDFLAAQGFNAIRLPFHLELVLNEKSPNGINYGAGANADLQGLNSLQVMDKVIQGAAARGIVVMLDLHSFAPDQFMSDGLWYNGANPESKVIAGWTKLLQRYKNQWNVVAADLKNEPHS-STWGTGNTATDWNLGAARLANAIASAVSD-RFLMFVEGVSNSPPCRENCFWGENLTGARTNPVVIDHPA---KLVYSPHVYGPNVFGQSYFSAGNFPANMPAIWEDHWGFIPAATDRAFVIGEWGGPFSGKDRVWMEALAAYLKTKDSTGQFFWCLNPNSGDTGGLLKDDWSSPDSGKLALLADLVSAPTKFAVNAQGQVCINGGNQPAPS 407          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|470449528|ref|XP_004340288.1| (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440797173|gb|ELR18268.1| cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 304.679 bits (779), Expect = 1.001e-94
Identity = 158/360 (43.89%), Postives = 217/360 (60.28%), Query Frame = 0
Query:   16 LTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISD-LWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGG----GGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRL 370
            L +TSE   + VN +++ +KG +WFGFET    VHGLW   + + T +LD LA  GFNAIRLPF ++L L   +         A+A L  L S Q+MDK+V+ A  RG+++MLD H   PD+ +SD +WY+    E  ++  W  +L R+K  WNV A DLKNEPH   +WG+G   TDW   + R+   IA+A  D R L FV G+          +WG N    R +PV + +     ++VY+PHVYGP+VF QSYFS+ +FP N+PA+W+ HWGF+      A V+ EWGG   GKD  W E +  YL+ K   D F+WCLNPNSGDTGG+L +DWS+    KL LL ++   P++ 
Sbjct:   29 LNFTSEAGKLWVNGQRYHLKGTSWFGFETAACTVHGLW---ANSYTFFLDFLAAQGFNAIRLPFHLELVLNEKSPNGINYGAGANADLQGLNSLQVMDKIVQAAAARGLLIMLDLHSFAPDQFMSDGMWYNGANPESKVIAGWTKLLQRYKNQWNVIAADLKNEPH-TSTWGTGNPNTDWNLGAARLADAIASAVSD-RFLMFVEGVSNSPPCRENCFWGENLTGARTNPVVIANPA---KLVYSPHVYGPNVFGQSYFSAGNFPANMPAIWEDHWGFIPAATGRAFVIGEWGGPFSGKDQVWMEALVAYLKAKDSTDQFFWCLNPNSGDTGGLLKNDWSSPESGKLALLANLVSAPTKF 380          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|470386618|ref|XP_004334214.1| (glycoside hydrolase family protein [Acanthamoeba castellanii str. Neff] >gi|440790941|gb|ELR12201.1| glycoside hydrolase family protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 303.523 bits (776), Expect = 1.526e-94
Identity = 152/360 (42.22%), Postives = 217/360 (60.28%), Query Frame = 0
Query:   16 LTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISD-LWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGG----GGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRL 370
            L +TSE   + VN ++F++KG++WFGFET    VHGLW   + + T +LD LA  GFN IRLPF ++L L   +         ++A L  L S Q+MDK+V+ A  RG+++M D H   PD+ ++D +WY+    E  ++  W  +L R+K  WNV A DLKNEPH   +WG+G + TDW   + R+   IA+   D R L FV G+          +WG N    R +PV + +     ++VY+PHVYGP+VF QSYFS+ +FP N+PA+W+ HWGF+      A V+ EWGG   GKD  W + +  YL+ K   D F+WCLNPNSGDTGG+L +DW++    KL LL ++   P++ 
Sbjct:   40 LNFTSEAGKLWVNGQRFKLKGVSWFGFETAACTVHGLW---ANSYTFFLDFLAAQGFNTIRLPFHLELVLNDKSPNGINYGAGSNADLQGLNSLQVMDKIVQAAAARGLLIMFDLHSFAPDQFMADGMWYNAANPESKVISGWTKLLQRYKNQWNVIAADLKNEPH-TSTWGTGNSATDWNLGAARLANAIASGVSD-RFLMFVEGVANSPPCRENCFWGENLTGARTNPVVIANPA---KLVYSPHVYGPNVFGQSYFSAGNFPANMPAIWEDHWGFIPAATGRAFVIGEWGGPFSGKDQVWMDALVAYLKSKDSTDQFFWCLNPNSGDTGGLLQNDWASPETGKLALLANLVSAPTKF 391          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|470422180|ref|XP_004337474.1| (cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff] >gi|440794295|gb|ELR15461.1| cellulase (glycosyl hydrolase family 5) subfamily protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 301.982 bits (772), Expect = 8.807e-94
Identity = 161/360 (44.72%), Postives = 217/360 (60.28%), Query Frame = 0
Query:   16 LTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISD-LWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGG----GGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRL 370
            L +TSE+  + VN  + RIKG +WFGFET     HGLW   SK+ T +LD LA +GFNAIRLPF   LALA++   P      A++ L  LTS Q+MDK+++ A  RG+++MLD H    D   SD LWY+    E  ++  W  ML R++  WNVFA DLKNEP+   +WG+G   TDW   + RI   IA++    R L FV G           ++G +   V  +PV + +     ++VY+PHVYGP+V+ QSYFS+ +FP N+ A+W+ HWG++      AVVV EWGG   G DA W + +A YL+ K M D F+WCLNP+SGDTGG+L DDWST    KL LL  +   P+  
Sbjct:   31 LNFTSEQGGLWVNGNRLRIKGASWFGFETSINAPHGLW---SKSYTFFLDFLADNGFNAIRLPF--HLALAINDATPGSIDYSANSDLQGLTSLQVMDKIIQAAADRGILIMLDLHSFTADSYASDGLWYNSNNPESTVISGWTKMLQRYQNQWNVFAADLKNEPYS-ATWGTGSD-TDWAKGAARIANAIASSVSS-RFLIFVEGTANSPSCSDACFYGEDLVGVASNPVVINNP---WKLVYSPHVYGPNVYGQSYFSASNFPSNMAAIWEAHWGYIPASTGQAVVVGEWGGPYSGSDATWMDALAAYLKSKDMTDQFFWCLNPDSGDTGGLLADDWSTPVTAKLSLLAGLVSAPTAF 379          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|585109023|gb|EWM26893.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 293.123 bits (749), Expect = 1.027e-91
Identity = 155/363 (42.70%), Postives = 218/363 (60.06%), Query Frame = 0
Query:   13 KGPLTWTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSW-SFPDNLPAVWDLHWGFLSGVLETAVVVSEWGG----FCRGKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRL 370
            K  LTWT   + + VN + F +KG++WFG E  D  +  L G  ++ L + L  L  + FNAIR+PFS K AL  DT     G+ + D  ++ L+  Q ++K +E A    ++VMLD HRL+ D+ I +LWY + Y +  +L +WDI+L   K HWN+FA+DLKNEPHG  +WGSG A TDW  A+E+I +H+   HP+F+GL FV G+       +   F +++ HP+D G    N R+VY+PH YGP V    +F+ + +FP +  + W+  WGF+      A V+ EWGG    +   KD  WQ+R A+YL EK M+D F W LNP SGDTGG+L  +W    E+KL L   VQP PS L
Sbjct:   64 KEELTWTGTNKELRVNGKTFHLKGLSWFGLEVGDSNM--LLGLNNRGLDEILQFLVDNNFNAIRVPFSTKWALDYDTGVR--GYFR-DGDINQLSRRQFLNKFIERAADFKILVMLDSHRLN-DQEIPELWYSQEYTQEDMLAAWDILLGDLKHHWNLFAIDLKNEPHGAATWGSGNAATDWNTAAEKIGKHLLTKHPEFKGLVFVEGL------GYSIEFEKIKTHPIDFGKPEFNERLVYSPHQYGPSVTGDLHFAGYVNFPASQLSEWERCWGFIEEKTGHACVLGEWGGKYDSYHNDKDMVWQDRFAKYLVEKCMSDQFVWDLNPESGDTGGVLKANWWDAEEKKLALYDTVQPHPSWL 414          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|585104020|gb|EWM23139.1| (cellulase 2 [Nannochloropsis gaditana])

HSP 1 Score: 279.256 bits (713), Expect = 1.147e-84
Identity = 151/360 (41.94%), Postives = 221/360 (61.39%), Query Frame = 0
Query:   18 WTSERRMVLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVK-LALALDTTYPEPGFVQADASLSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGI----WGG-GGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQS-YFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCRG--KDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPS 368
            +TSE   V++N     +KG+NW+GFE     + GL      +   ++  LA H FNA+RLPFS++ LA  LD+       VQ D  +  LT GQ+MD++ + A  +G++++LD H +  ++GI+DLWYDE  +  ++L  W ++L RF   WN+  +DLKNEPHG  SWG G   TDW A + + I+ +A   PDF G+FFV GI    W     +WWGGN   VR++P+  GS  L+RRVVY+PH+YGP+VFP+  YF    FPDN+P +WD  +G++      AVV+ EWGG   G  K A  Q+++A +L    + DNF+WCLNP +   GG+L  D+  + +  L++L  VQP+P+
Sbjct:  177 YTSENGSVMLNGNPLYLKGLNWYGFEGELFVLDGL---AVWSPERFMSFLASHRFNALRLPFSLEWLARGLDSPLANIYVVQED--MRGLTQGQVMDRIFDAAAAQGILILLDLHVISVEKGITDLWYDETADGALVLDLWTLLLRRFAGRWNLLGIDLKNEPHGIASWGHGHPKTDWNAFATKSIQTLATRVPDFHGVFFVEGIERPRWNSPHAYWWGGNLEGVRKYPISTGSEDLDRRVVYSPHIYGPEVFPRHRYFQDSRFPDNMPGIWDHQFGWIEKSTGRAVVLGEWGGSIVGDRKAAANQQKLAEWLVHACIPDNFWWCLNPATEFNGGLLARDYQAVDKNVLQMLHYVQPKPT 531          
BLAST of EWM20925.1 vs. NCBI_GenBank
Match: gi|319655629|gb|ADV58321.1| (cellulase 2, partial [Pristionchus pacificus] >gi|319655639|gb|ADV58326.1| cellulase 2, partial [Pristionchus pacificus] >gi|319655647|gb|ADV58330.1| cellulase 2, partial [Pristionchus pacificus])

HSP 1 Score: 275.018 bits (702), Expect = 2.254e-84
Identity = 142/352 (40.34%), Postives = 200/352 (56.82%), Query Frame = 0
Query:   25 VLVNNRQFRIKGINWFGFETPDKCVHGLWGGLSKTLTDYLDLLAFHGFNAIRLPFSVKLALALDTTYPEPGFVQADAS----LSSLTSGQIMDKLVEEAGKRGMMVMLDQHRLDPDRGISDLWYDEGYEEPVILRSWDIMLARFKTHWNVFALDLKNEPHGPCSWGSGEALTDWKAASERIIRHIAAAHPDFRGLFFVSGIWGGGGHWWGGNFRRVREHPVDVGSTGLNRRVVYTPHVYGPDVFPQSYFSSWSFPDNLPAVWDLHWGFLSGVLETAVVVSEWGGFCR--GKDAKWQERIARYLREKGMADNFYWCLNPNSGDTGGILLDDWSTMHEQKLKLLRDVQPEPSRL 370
            +LVN +   +KGIN+FGFET     HG+W   S  L  YLD +  + FNAIR+PFS+++          P  +  + +    L   T+ Q++D  ++ A +RG+++MLD HR+ P  GIS+LWY+  Y E            +    WNVFA+DLKNEPH   SWG+  A TDW  A+ERII  +++    F GLFFV GI       WG     V + P++ G+  LN RVVY+PH YGP V+ +  F++  FP+N+  ++ + +GF+       VVV EWGG      KD  W +    +LR K + +NFYWCLNPNS DTGG+L DDW T   +K+ L    QP P++ 
Sbjct:    1 ILVNGQPLVLKGINYFGFETETYTPHGIW---SYDLNFYLDFIKNNNFNAIRVPFSLEMVKN------NPSNLNINCATNPGLCGKTALQLLDVFIDRAAERGLLIMLDNHRITPGGGISELWYNNDYSE-------SQKFTKTHCRWNVFAIDLKNEPHDSASWGNSNAATDWNKAAERIINSLSS----FLGLFFVEGIE------WGNRLENVAQFPINTGNPSLNNRVVYSPHCYGPSVYDRPEFNTPDFPNNVDGIYMVKYGFIVNQTGQPVVVGEWGGRAEVGSKDMTWNQWYVEWLRSKCITNNFYWCLNPNSADTGGLLEDDWLTPIPRKINLTNRAQPNPTKF 326          
The following BLAST results are available for this feature:
BLAST of EWM20925.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100881|gb|EWM20925.1|0.000e+0100.00cellulase 2 [Nannochloropsis gaditana][more]
gi|585108543|gb|EWM26490.1|6.821e-10442.86cellulase 2 [Nannochloropsis gaditana][more]
gi|470501173|ref|XP_004347125.1|4.015e-9643.01cellulase (glycosyl hydrolase family 5) subfamily ... [more]
gi|470399635|ref|XP_004335429.1|1.947e-9543.27cellulase (glycosyl hydrolase family 5) subfamily ... [more]
gi|470449528|ref|XP_004340288.1|1.001e-9443.89cellulase (glycosyl hydrolase family 5) subfamily ... [more]
gi|470386618|ref|XP_004334214.1|1.526e-9442.22glycoside hydrolase family protein [Acanthamoeba c... [more]
gi|470422180|ref|XP_004337474.1|8.807e-9444.72cellulase (glycosyl hydrolase family 5) subfamily ... [more]
gi|585109023|gb|EWM26893.1|1.027e-9142.70cellulase 2 [Nannochloropsis gaditana][more]
gi|585104020|gb|EWM23139.1|1.147e-8441.94cellulase 2 [Nannochloropsis gaditana][more]
gi|319655629|gb|ADV58321.1|2.254e-8440.34cellulase 2, partial [Pristionchus pacificus] >gi|... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9782rna9782Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications