EWM20913.1, cds9748 (CDS) Nannochloropsis gaditana

Overview
NameEWM20913.1
Unique Namecds9748
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:90812..91741 -

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Properties
Property NameValue
Protein idEWM20913.1
ProductProtein of unknown function DUF1499
Orig transcript idgnl|cribi|Naga_100061g15.8546.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:90812..91741 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR010865DUF1499
Homology
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|585100869|gb|EWM20913.1| (Protein of unknown function DUF1499 [Nannochloropsis gaditana])

HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0
Query:    1 MTTVWPSGRQRVRRCRTCKTSPSLFTPPSTSSPSLMLIEALLLLFIVASNAFLLPHRSNFSRAKSLSRAHVEGSDRGSERRSHSHGIPRDQYLRLTSAAGNFFATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEGRNGN 309
            MTTVWPSGRQRVRRCRTCKTSPSLFTPPSTSSPSLMLIEALLLLFIVASNAFLLPHRSNFSRAKSLSRAHVEGSDRGSERRSHSHGIPRDQYLRLTSAAGNFFATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEGRNGN
Sbjct:    1 MTTVWPSGRQRVRRCRTCKTSPSLFTPPSTSSPSLMLIEALLLLFIVASNAFLLPHRSNFSRAKSLSRAHVEGSDRGSERRSHSHGIPRDQYLRLTSAAGNFFATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEGRNGN 309          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|299471850|emb|CBN77020.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 172.17 bits (435), Expect = 7.195e-48
Identity = 93/192 (48.44%), Postives = 124/192 (64.58%), Query Frame = 0
Query:   84 SHGIPRDQYLRLTSAAGNFFATTILT---IQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKE----DGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSY 268
            S  +P D  +  T A   FF   +L+   +  P  + +    LGV+D LLA+CP+  +C SSQDDRP  F EPW Y D   E++M RLR+Y+E   GA+ I++  RYLR E +       ++DD EFYFTP D+++QFR ARR    D GAN++RM+ IR AL FE IPVLRNR+RALFF ESP+D +GPS+
Sbjct:   84 SATLPVDAAVTRTEALSGFFQAVLLSTAVLANPPDSNSD--GLGVVDDLLADCPSTPTCVSSQDDRPYPFMEPWSY-DGPFERSMSRLRNYLE-FNGAKVIASSPRYLRVEFEAVNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSF 271          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|551544698|ref|XP_005760391.1| (hypothetical protein EMIHUDRAFT_106310 [Emiliania huxleyi CCMP1516] >gi|485608812|gb|EOD07962.1| hypothetical protein EMIHUDRAFT_106310 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 150.984 bits (380), Expect = 1.067e-40
Identity = 86/193 (44.56%), Postives = 113/193 (58.55%), Query Frame = 0
Query:  127 DQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDG----NIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSY----------REDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEG 305
            D + ++C     C SSQDDRP V+  PW  E A    AM RLR  +E     + +  ++RYLR E    G     +DD EF+FTP+D ++QFR+ARRGD  D GAN+KR+E+ RIALG+EK+ VLRNRRRAL  +ESP D +GP+           R+  P   +  + YGD DPLA  W  P P     K+G
Sbjct:   33 DGIFSDC--SGFCVSSQDDRPAVWDNPWVAEQALP-SAMERLRRVIELKLQGKVVEQDERYLRAEFASRGPLGDAVDDAEFFFTPDDVLVQFRAARRGDAPDFGANRKRLERARIALGWEKVEVLRNRRRALVVVESPFDSFGPATYERDELGFTNRDLVPAEANQKELYGDLDPLAAPWRKPTPSMRDAKDG 222          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|873224117|emb|CEM27118.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 145.976 bits (367), Expect = 5.010e-38
Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0
Query:  123 LGVIDQLLAECPT-EKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAET--ISAEDRYLRFEIKED--GNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPS 267
            LGV   LL+ CP    SC SSQDDRP  FQEPW YE+   +  MRRL++ +  LP  +   + + +RYLR EI ++    +DD EFY TP D+ +QFR+ARR    D G N++R+E IRIALG EK+PVLR  RR +F  ESPLD +GPS
Sbjct:  116 LGVDQDLLSYCPDGSSSCVSSQDDRPAFFQEPWMYEEIEPDMLMRRLKAALALLPKVQVKQVVSSERYLRVEIADETLKTVDDVEFYLTPGDNTVQFRAARRDSLPDFGVNRRRLESIRIALGLEKVPVLRY-RRTIFPWESPLDQFGPS 264          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|971513298|dbj|GAQ84922.1| (hypothetical protein KFL_002120160 [Klebsormidium nitens])

HSP 1 Score: 117.857 bits (294), Expect = 5.298e-28
Identity = 85/236 (36.02%), Postives = 116/236 (49.15%), Query Frame = 0
Query:   55 PHRSNFSRAKSLSRAHVEGSDRGSERRSHSHGIPRD----QYLRLTSAAGNFFATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFE-IKEDGNIDDTEFYFT--PNDSIIQFRSARRG-DGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAY 282
            P      R K L R   EG  R         G   D    Q+    SAAG     +   +QT  +       +GV+D  LA C +  +C SS DDRPP F  PWEY  A+  +A+R L   +E L G     A+ +Y+    + EDG IDD E+ F+   +D I+Q  +A R  +  D G N  R+EKIR  L +E++P+LRNR R  +F+ESP D +GP   E  P   D D  +
Sbjct:   13 PEEPKDKRQKRLLRTEKEGQGRRQFLSWLLGGALADWSRLQWPGPASAAGWGLPWSTPAVQTAPSEGTCATCIGVVDDTLASCGSITNCVSSFDDRPPFFCAPWEYP-ASLPEAVRTLEQQIERL-GGTVNEAQQKYVYATFVDEDGVIDDVEWLFSDSASDRIVQIHAASRAREQPDGGRNATRLEKIRAGLQWEQVPILRNRVRKFYFIESPWDTFGP---EPPPGSYDYDNGF 243          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|1026764629|gb|OAE25430.1| (hypothetical protein AXG93_2818s1070 [Marchantia polymorpha subsp. ruderalis])

HSP 1 Score: 115.546 bits (288), Expect = 2.631e-26
Identity = 64/150 (42.67%), Postives = 96/150 (64.00%), Query Frame = 0
Query:  123 LGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISA-EDRYL--RFEIKEDGNIDDTEFYFT--PNDSIIQFRSARRGDGR-DRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGP 266
            +GV+D+ L  C +  +C SS DDRP  F  PWE+     + A+  L+  + ++ GA+ I+  E+RY+  +F  KEDG IDD EF F+    D+ +  R+A R  G  D+  N++R+E+IR +L +E++P+LRNR R LFFLESP D +GP
Sbjct:  170 IGVVDETLGTCNSTPNCVSSFDDRPNFFVAPWEFPGQLSD-AVNALKETLSSM-GADIIAEPEERYVHAKFIDKEDGVIDDVEFLFSNPSEDATVVIRAASRAQGTADKARNRERLERIRSSLTWEEVPILRNRSRTLFFLESPWDSFGP 317          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|168050245|ref|XP_001777570.1| (predicted protein [Physcomitrella patens] >gi|162671055|gb|EDQ57613.1| predicted protein [Physcomitrella patens])

HSP 1 Score: 112.849 bits (281), Expect = 9.523e-26
Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 0
Query:  123 LGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIK-EDGNIDDTEFYFT--PNDSIIQFRSARRG-DGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGP 266
            +GV+D  L  C    +C SS DDRP  F  PWE+  + +  A+  L+  +E   GA      DRY+    K +DG  DD EF F+    D+ +  RSA R  D +D G N+KR+E +R+ LG+E++P+LRNR+R LFF+ESP D +GP
Sbjct:  106 IGVVDDTLGSCSATTNCVSSFDDRPSFFTAPWEFPGSLR-AAVSNLQEALEG-SGAFIKEKSDRYIYAVFKGDDGVSDDVEFLFSDPSVDATVNVRSASRAKDYKDSGRNRKRLEALRMELGWEQVPILRNRQRRLFFIESPWDTFGP 251          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|1004147592|gb|KXZ55565.1| (hypothetical protein GPECTOR_2g1114 [Gonium pectorale])

HSP 1 Score: 106.686 bits (265), Expect = 1.497e-24
Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 0
Query:  123 LGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAET-ISAEDRYLRFEIKEDG--NIDDTEFYFTPNDSIIQFRSARRGDGR-DRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGP 266
            +GV+D  L  C   +SC SS DDRP  F  PW ++ A+++ A+R L   VE   G+   + +   Y        G    DD EF     D  +  RSA R  G  D G N++R+E++RI LG+E++P+LRNR+RAL F+ESP D +GP
Sbjct:    8 IGVVDGTLGSCAGLQSCVSSFDDRPGHFIAPWSHDLASRDDAVRALTRAVEAFSGSIARVESSPTYAYVYATWRGWQGTDDVEFLLPEGDQTVVLRSAPRAQGVPDLGRNEQRLEQLRIRLGWEQVPILRNRQRALLFVESPWDRFGP 155          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|223999125|ref|XP_002289235.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974443|gb|EED92772.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 107.071 bits (266), Expect = 1.132e-23
Identity = 70/180 (38.89%), Postives = 93/180 (51.67%), Query Frame = 0
Query:  123 LGVIDQLLAECPTEKS---------CASSQDDRPPVFQEPWEYEDAT----QEKAMRRLRSYVENLPGAETISAE---DRYLR--FEIKEDGNIDDTEFYFTPNDSIIQFRSARRGD------GRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDL 278
            LGV D LLA+CP   +         C SSQDD P +F EPW+Y D      ++  M  L     +    + +  +    RYLR  F     G     EFYFTPND I+QFR A          GR   +N +R E++R +L + K+PVLRNR+R LFF+ES LD +GP      P PE++
Sbjct:   35 LGVWDGLLADCPHGTNNLFGSGGAGCVSSQDDTPGIFAEPWDYSDENTDYERQMGMLLLALQTASKQHGDQVKVDVQSGRYLRVFFTDGSSGETSVGEFYFTPNDYIVQFRIASTSQMTAGLVGRSL-SNMERSERVRKSLRYLKVPVLRNRKRTLFFVESDLDAFGPGSAALGP-PEEM 212          
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|302835658|ref|XP_002949390.1| (hypothetical protein VOLCADRAFT_117200 [Volvox carteri f. nagariensis] >gi|300265217|gb|EFJ49409.1| hypothetical protein VOLCADRAFT_117200 [Volvox carteri f. nagariensis])

HSP 1 Score: 101.679 bits (252), Expect = 1.013e-22
Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 0
Query:  133 CPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDR----YLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGR-DRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGP 266
            C   +SC SS DDRP  F  PW Y+  ++  A++ L   ++ L G +    E+     Y+          DD EF+    D+ +  RSA R  G  D G N++R+E++R+ LG+E +P+LRNRRRALFF+ESP D +GP
Sbjct:   10 CAGLRSCVSSFDDRPGHFVAPWTYDSVSRADAVQMLAQAIQGL-GGDVQKVENAVSYGYVYATWTTWPGTDDVEFFLPDGDTTVLVRSAARQQGVPDWGRNERRLEQVRLELGWEPVPILRNRRRALFFVESPWDSFGP 147          
The following BLAST results are available for this feature:
BLAST of EWM20913.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100869|gb|EWM20913.1|0.000e+0100.00Protein of unknown function DUF1499 [Nannochlorops... [more]
gi|299471850|emb|CBN77020.1|7.195e-4848.44conserved unknown protein [Ectocarpus siliculosus][more]
gi|551544698|ref|XP_005760391.1|1.067e-4044.56hypothetical protein EMIHUDRAFT_106310 [Emiliania ... [more]
gi|873224117|emb|CEM27118.1|5.010e-3851.33unnamed protein product [Vitrella brassicaformis C... [more]
gi|971513298|dbj|GAQ84922.1|5.298e-2836.02hypothetical protein KFL_002120160 [Klebsormidium ... [more]
gi|1026764629|gb|OAE25430.1|2.631e-2642.67hypothetical protein AXG93_2818s1070 [Marchantia p... [more]
gi|168050245|ref|XP_001777570.1|9.523e-2642.57predicted protein [Physcomitrella patens] >gi|1626... [more]
gi|1004147592|gb|KXZ55565.1|1.497e-2440.54hypothetical protein GPECTOR_2g1114 [Gonium pector... [more]
gi|223999125|ref|XP_002289235.1|1.132e-2338.89predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|302835658|ref|XP_002949390.1|1.013e-2239.57hypothetical protein VOLCADRAFT_117200 [Volvox car... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9779rna9779Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications