EWM20913.1, cds9748 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|585100869|gb|EWM20913.1| (Protein of unknown function DUF1499 [Nannochloropsis gaditana]) HSP 1 Score: 632.869 bits (1631), Expect = 0.000e+0 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 0 Query: 1 MTTVWPSGRQRVRRCRTCKTSPSLFTPPSTSSPSLMLIEALLLLFIVASNAFLLPHRSNFSRAKSLSRAHVEGSDRGSERRSHSHGIPRDQYLRLTSAAGNFFATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEGRNGN 309 MTTVWPSGRQRVRRCRTCKTSPSLFTPPSTSSPSLMLIEALLLLFIVASNAFLLPHRSNFSRAKSLSRAHVEGSDRGSERRSHSHGIPRDQYLRLTSAAGNFFATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEGRNGN Sbjct: 1 MTTVWPSGRQRVRRCRTCKTSPSLFTPPSTSSPSLMLIEALLLLFIVASNAFLLPHRSNFSRAKSLSRAHVEGSDRGSERRSHSHGIPRDQYLRLTSAAGNFFATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEGRNGN 309
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|299471850|emb|CBN77020.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 172.17 bits (435), Expect = 7.195e-48 Identity = 93/192 (48.44%), Postives = 124/192 (64.58%), Query Frame = 0 Query: 84 SHGIPRDQYLRLTSAAGNFFATTILT---IQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKE----DGNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSY 268 S +P D + T A FF +L+ + P + + LGV+D LLA+CP+ +C SSQDDRP F EPW Y D E++M RLR+Y+E GA+ I++ RYLR E + ++DD EFYFTP D+++QFR ARR D GAN++RM+ IR AL FE IPVLRNR+RALFF ESP+D +GPS+ Sbjct: 84 SATLPVDAAVTRTEALSGFFQAVLLSTAVLANPPDSNSD--GLGVVDDLLADCPSTPTCVSSQDDRPYPFMEPWSY-DGPFERSMSRLRNYLE-FNGAKVIASSPRYLRVEFEAVNAIPASVDDAEFYFTPGDALVQFRCARRNGPTDFGANRRRMDGIRQALKFESIPVLRNRKRALFFGESPIDSFGPSF 271
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|551544698|ref|XP_005760391.1| (hypothetical protein EMIHUDRAFT_106310 [Emiliania huxleyi CCMP1516] >gi|485608812|gb|EOD07962.1| hypothetical protein EMIHUDRAFT_106310 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 150.984 bits (380), Expect = 1.067e-40 Identity = 86/193 (44.56%), Postives = 113/193 (58.55%), Query Frame = 0 Query: 127 DQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIKEDG----NIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSY----------REDAPRPEDLDQAYGDSDPLAPGWEAPPPYPWRGKEG 305 D + ++C C SSQDDRP V+ PW E A AM RLR +E + + ++RYLR E G +DD EF+FTP+D ++QFR+ARRGD D GAN+KR+E+ RIALG+EK+ VLRNRRRAL +ESP D +GP+ R+ P + + YGD DPLA W P P K+G Sbjct: 33 DGIFSDC--SGFCVSSQDDRPAVWDNPWVAEQALP-SAMERLRRVIELKLQGKVVEQDERYLRAEFASRGPLGDAVDDAEFFFTPDDVLVQFRAARRGDAPDFGANRKRLERARIALGWEKVEVLRNRRRALVVVESPFDSFGPATYERDELGFTNRDLVPAEANQKELYGDLDPLAAPWRKPTPSMRDAKDG 222
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|873224117|emb|CEM27118.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 145.976 bits (367), Expect = 5.010e-38 Identity = 77/150 (51.33%), Postives = 99/150 (66.00%), Query Frame = 0 Query: 123 LGVIDQLLAECPT-EKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAET--ISAEDRYLRFEIKED--GNIDDTEFYFTPNDSIIQFRSARRGDGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPS 267 LGV LL+ CP SC SSQDDRP FQEPW YE+ + MRRL++ + LP + + + +RYLR EI ++ +DD EFY TP D+ +QFR+ARR D G N++R+E IRIALG EK+PVLR RR +F ESPLD +GPS Sbjct: 116 LGVDQDLLSYCPDGSSSCVSSQDDRPAFFQEPWMYEEIEPDMLMRRLKAALALLPKVQVKQVVSSERYLRVEIADETLKTVDDVEFYLTPGDNTVQFRAARRDSLPDFGVNRRRLESIRIALGLEKVPVLRY-RRTIFPWESPLDQFGPS 264
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|971513298|dbj|GAQ84922.1| (hypothetical protein KFL_002120160 [Klebsormidium nitens]) HSP 1 Score: 117.857 bits (294), Expect = 5.298e-28 Identity = 85/236 (36.02%), Postives = 116/236 (49.15%), Query Frame = 0 Query: 55 PHRSNFSRAKSLSRAHVEGSDRGSERRSHSHGIPRD----QYLRLTSAAGNFFATTILTIQTPRATQARLLPLGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFE-IKEDGNIDDTEFYFT--PNDSIIQFRSARRG-DGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDLDQAY 282 P R K L R EG R G D Q+ SAAG + +QT + +GV+D LA C + +C SS DDRPP F PWEY A+ +A+R L +E L G A+ +Y+ + EDG IDD E+ F+ +D I+Q +A R + D G N R+EKIR L +E++P+LRNR R +F+ESP D +GP E P D D + Sbjct: 13 PEEPKDKRQKRLLRTEKEGQGRRQFLSWLLGGALADWSRLQWPGPASAAGWGLPWSTPAVQTAPSEGTCATCIGVVDDTLASCGSITNCVSSFDDRPPFFCAPWEYP-ASLPEAVRTLEQQIERL-GGTVNEAQQKYVYATFVDEDGVIDDVEWLFSDSASDRIVQIHAASRAREQPDGGRNATRLEKIRAGLQWEQVPILRNRVRKFYFIESPWDTFGP---EPPPGSYDYDNGF 243
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|1026764629|gb|OAE25430.1| (hypothetical protein AXG93_2818s1070 [Marchantia polymorpha subsp. ruderalis]) HSP 1 Score: 115.546 bits (288), Expect = 2.631e-26 Identity = 64/150 (42.67%), Postives = 96/150 (64.00%), Query Frame = 0 Query: 123 LGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISA-EDRYL--RFEIKEDGNIDDTEFYFT--PNDSIIQFRSARRGDGR-DRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGP 266 +GV+D+ L C + +C SS DDRP F PWE+ + A+ L+ + ++ GA+ I+ E+RY+ +F KEDG IDD EF F+ D+ + R+A R G D+ N++R+E+IR +L +E++P+LRNR R LFFLESP D +GP Sbjct: 170 IGVVDETLGTCNSTPNCVSSFDDRPNFFVAPWEFPGQLSD-AVNALKETLSSM-GADIIAEPEERYVHAKFIDKEDGVIDDVEFLFSNPSEDATVVIRAASRAQGTADKARNRERLERIRSSLTWEEVPILRNRSRTLFFLESPWDSFGP 317
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|168050245|ref|XP_001777570.1| (predicted protein [Physcomitrella patens] >gi|162671055|gb|EDQ57613.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 112.849 bits (281), Expect = 9.523e-26 Identity = 63/148 (42.57%), Postives = 89/148 (60.14%), Query Frame = 0 Query: 123 LGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDRYLRFEIK-EDGNIDDTEFYFT--PNDSIIQFRSARRG-DGRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGP 266 +GV+D L C +C SS DDRP F PWE+ + + A+ L+ +E GA DRY+ K +DG DD EF F+ D+ + RSA R D +D G N+KR+E +R+ LG+E++P+LRNR+R LFF+ESP D +GP Sbjct: 106 IGVVDDTLGSCSATTNCVSSFDDRPSFFTAPWEFPGSLR-AAVSNLQEALEG-SGAFIKEKSDRYIYAVFKGDDGVSDDVEFLFSDPSVDATVNVRSASRAKDYKDSGRNRKRLEALRMELGWEQVPILRNRQRRLFFIESPWDTFGP 251
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|1004147592|gb|KXZ55565.1| (hypothetical protein GPECTOR_2g1114 [Gonium pectorale]) HSP 1 Score: 106.686 bits (265), Expect = 1.497e-24 Identity = 60/148 (40.54%), Postives = 85/148 (57.43%), Query Frame = 0 Query: 123 LGVIDQLLAECPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAET-ISAEDRYLRFEIKEDG--NIDDTEFYFTPNDSIIQFRSARRGDGR-DRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGP 266 +GV+D L C +SC SS DDRP F PW ++ A+++ A+R L VE G+ + + Y G DD EF D + RSA R G D G N++R+E++RI LG+E++P+LRNR+RAL F+ESP D +GP Sbjct: 8 IGVVDGTLGSCAGLQSCVSSFDDRPGHFIAPWSHDLASRDDAVRALTRAVEAFSGSIARVESSPTYAYVYATWRGWQGTDDVEFLLPEGDQTVVLRSAPRAQGVPDLGRNEQRLEQLRIRLGWEQVPILRNRQRALLFVESPWDRFGP 155
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|223999125|ref|XP_002289235.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974443|gb|EED92772.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 107.071 bits (266), Expect = 1.132e-23 Identity = 70/180 (38.89%), Postives = 93/180 (51.67%), Query Frame = 0 Query: 123 LGVIDQLLAECPTEKS---------CASSQDDRPPVFQEPWEYEDAT----QEKAMRRLRSYVENLPGAETISAE---DRYLR--FEIKEDGNIDDTEFYFTPNDSIIQFRSARRGD------GRDRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGPSYREDAPRPEDL 278 LGV D LLA+CP + C SSQDD P +F EPW+Y D ++ M L + + + + RYLR F G EFYFTPND I+QFR A GR +N +R E++R +L + K+PVLRNR+R LFF+ES LD +GP P PE++ Sbjct: 35 LGVWDGLLADCPHGTNNLFGSGGAGCVSSQDDTPGIFAEPWDYSDENTDYERQMGMLLLALQTASKQHGDQVKVDVQSGRYLRVFFTDGSSGETSVGEFYFTPNDYIVQFRIASTSQMTAGLVGRSL-SNMERSERVRKSLRYLKVPVLRNRKRTLFFVESDLDAFGPGSAALGP-PEEM 212
BLAST of EWM20913.1 vs. NCBI_GenBank
Match: gi|302835658|ref|XP_002949390.1| (hypothetical protein VOLCADRAFT_117200 [Volvox carteri f. nagariensis] >gi|300265217|gb|EFJ49409.1| hypothetical protein VOLCADRAFT_117200 [Volvox carteri f. nagariensis]) HSP 1 Score: 101.679 bits (252), Expect = 1.013e-22 Identity = 55/139 (39.57%), Postives = 80/139 (57.55%), Query Frame = 0 Query: 133 CPTEKSCASSQDDRPPVFQEPWEYEDATQEKAMRRLRSYVENLPGAETISAEDR----YLRFEIKEDGNIDDTEFYFTPNDSIIQFRSARRGDGR-DRGANQKRMEKIRIALGFEKIPVLRNRRRALFFLESPLDGWGP 266 C +SC SS DDRP F PW Y+ ++ A++ L ++ L G + E+ Y+ DD EF+ D+ + RSA R G D G N++R+E++R+ LG+E +P+LRNRRRALFF+ESP D +GP Sbjct: 10 CAGLRSCVSSFDDRPGHFVAPWTYDSVSRADAVQMLAQAIQGL-GGDVQKVENAVSYGYVYATWTTWPGTDDVEFFLPDGDTTVLVRSAARQQGVPDWGRNERRLEQVRLELGWEPVPILRNRRRALFFVESPWDSFGP 147 The following BLAST results are available for this feature:
BLAST of EWM20913.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|