EWM20929.1, cds9730 (CDS) Nannochloropsis gaditana

Overview
NameEWM20929.1
Unique Namecds9730
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037256.1:55083..55200 -
Alignment locationKK037256.1:54727..54875 -
Alignment locationKK037256.1:54483..54632 -
Alignment locationKK037256.1:54010..54326 -
Alignment locationKK037256.1:53777..53891 -
Alignment locationKK037256.1:53408..53696 -
Alignment locationKK037256.1:52804..53274 -
Alignment locationKK037256.1:52564..52728 -
Alignment locationKK037256.1:51191..51429 -
Alignment locationKK037256.1:50951..51048 -
Alignment locationKK037256.1:50713..50809 -
Alignment locationKK037256.1:49867..50145 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM20929.1
Productt-complex protein 1 subunit zeta isoform a
Orig transcript idgnl|cribi|Naga_100061g30.8562.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037256.1supercontigKK037256.1:55083..55200 -
KK037256.1supercontigKK037256.1:54727..54875 -
KK037256.1supercontigKK037256.1:54483..54632 -
KK037256.1supercontigKK037256.1:54010..54326 -
KK037256.1supercontigKK037256.1:53777..53891 -
KK037256.1supercontigKK037256.1:53408..53696 -
KK037256.1supercontigKK037256.1:52804..53274 -
KK037256.1supercontigKK037256.1:52564..52728 -
KK037256.1supercontigKK037256.1:51191..51429 -
KK037256.1supercontigKK037256.1:50951..51048 -
KK037256.1supercontigKK037256.1:50713..50809 -
KK037256.1supercontigKK037256.1:49867..50145 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006457protein folding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0000166nucleotide binding
GO:0051082unfolded protein binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR002194Chaperonin_TCP-1_CS
IPR027409GroEL-like_apical_dom
IPR002423Cpn60/TCP-1
IPR027413GROEL-like_equatorial
IPR012722Chap_CCT_zeta
IPR027410TCP-1-like_intermed
IPR017998Chaperone_TCP-1
Homology
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|585100885|gb|EWM20929.1| (t-complex protein 1 subunit zeta isoform a [Nannochloropsis gaditana])

HSP 1 Score: 1694.09 bits (4386), Expect = 0.000e+0
Identity = 828/828 (100.00%), Postives = 828/828 (100.00%), Query Frame = 0
Query:    1 MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLSQGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKEGESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVAGGGQLHEREIGIERIIHQSFLHLRIIRVAAIHFQTLFLVLPLSRPFLFAAVRGRLRTATTSSFASSPSSGAPLPVTVAQEPFWKAYLNSPITFSFESEIKKAVRSCHNMQASPEAPVLRSLLKQCDGLLFLTVARAGCFLTGQAGSGLVLLKDSEGNWSAPACVGAVGGGVGLQAGGEVTDYVLFFKTEEAQEAMKGATQLVTWRVESLRSKGEARATQHTVGHSGRSSRSYAFVRLRGRLSVETRVALPSSSLLSILLSSLSLSLRNKYHLSLFSSSSLAFRLPGRPDPCQGG 828
            MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLSQGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKEGESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVAGGGQLHEREIGIERIIHQSFLHLRIIRVAAIHFQTLFLVLPLSRPFLFAAVRGRLRTATTSSFASSPSSGAPLPVTVAQEPFWKAYLNSPITFSFESEIKKAVRSCHNMQASPEAPVLRSLLKQCDGLLFLTVARAGCFLTGQAGSGLVLLKDSEGNWSAPACVGAVGGGVGLQAGGEVTDYVLFFKTEEAQEAMKGATQLVTWRVESLRSKGEARATQHTVGHSGRSSRSYAFVRLRGRLSVETRVALPSSSLLSILLSSLSLSLRNKYHLSLFSSSSLAFRLPGRPDPCQGG
Sbjct:    1 MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLSQGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKEGESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVAGGGQLHEREIGIERIIHQSFLHLRIIRVAAIHFQTLFLVLPLSRPFLFAAVRGRLRTATTSSFASSPSSGAPLPVTVAQEPFWKAYLNSPITFSFESEIKKAVRSCHNMQASPEAPVLRSLLKQCDGLLFLTVARAGCFLTGQAGSGLVLLKDSEGNWSAPACVGAVGGGVGLQAGGEVTDYVLFFKTEEAQEAMKGATQLVTWRVESLRSKGEARATQHTVGHSGRSSRSYAFVRLRGRLSVETRVALPSSSLLSILLSSLSLSLRNKYHLSLFSSSSLAFRLPGRPDPCQGG 828          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|299115943|emb|CBN75950.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 839.336 bits (2167), Expect = 0.000e+0
Identity = 392/530 (73.96%), Postives = 466/530 (87.92%), Query Frame = 0
Query:    1 MAAATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLSQG-PTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKEGESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQ 529
            MAA TR VNP+AE+VSK+QAL+VN +AA+GLQNVLK+NLGPRGTLKMLVGGAGQIK+TKDG VLLHEMQIQHPTA +IAR+ATAQDD+TGDGTTTSVL  GELL+QAER+L+EGLHPRV+ EG++LAK+  LE LDTF+  +  ++ DRELL S+ARTSLRTKL  E+AD MTEAVT AVLT+ +    IDLHMVEIM M HK G+DS  ++GLV+DHGARHPDMP++L  CHI TCNVSFEYEK+EV SGFFYS A+ERE+LV SER+FTD+KV QVI+FKRKVCKEGESFV+INQKGIDPLSLDMFAKEGI ALRRAKRRNMERLTLACGG+ +NS ED+SE+MLGWAG+V+E+TLG++K+TFVEDVRH RSCTIL+KGPN HTI QIKDA+RDGLRAVKN I+D+A+VPG G+FEVAA+  LQ +K  V G+ KLG+ AFAEAL++VPKTLAENSGFDVQD++I L++EH ++G AVGLD+ TGE M P   GVWDNY VKRQSLHL+T+LA+QLL+VDEVM+AG+Q
Sbjct:    1 MAAPTRFVNPNAEVVSKTQALMVNVAAARGLQNVLKTNLGPRGTLKMLVGGAGQIKLTKDGRVLLHEMQIQHPTAMMIARSATAQDDVTGDGTTTSVLFTGELLRQAERYLTEGLHPRVLTEGFELAKEHALELLDTFRSTRSAVEEDRELLESVARTSLRTKLREEVADNMTEAVTGAVLTIMKSRDEIDLHMVEIMQMRHKAGTDSVLIKGLVMDHGARHPDMPRSLKNCHILTCNVSFEYEKTEVQSGFFYSTAQEREKLVESERKFTDEKVMQVIEFKRKVCKEGESFVIINQKGIDPLSLDMFAKEGIFALRRAKRRNMERLTLACGGMAVNSTEDISEEMLGWAGQVHEETLGDDKFTFVEDVRHPRSCTILVKGPNDHTIAQIKDAIRDGLRAVKNTIDDQAVVPGAGAFEVAANLSLQKFKTTVKGRAKLGIEAFAEALMIVPKTLAENSGFDVQDSVIKLVDEHVESGAAVGLDLMTGEPMLPEQEGVWDNYCVKRQSLHLSTVLASQLLLVDEVMKAGKQ 530          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|1214703203|gb|OWZ15261.1| (T-complex protein 1, zeta subunit [Phytophthora megakarya])

HSP 1 Score: 793.112 bits (2047), Expect = 0.000e+0
Identity = 382/536 (71.27%), Postives = 462/536 (86.19%), Query Frame = 0
Query:    6 RLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLS--QGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKE--GESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVAGGG 537
            R +NP+AEIVSKSQAL+VN SAAKGLQ VLKSNLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTA+LIAR ATAQDD+TGDGTT++VL +GELLKQAERFL++GLHPR+++EG+++AKD  L  LD+ K+   EI  DRELL S+ARTSLRTKL  ++AD++TE +TDAVLT++  + P IDLHM+EIMHM H+  SD+R V+GLVLDHG+RHPDMP +L  C+I TCNVS EYEKSEV SGFFY++A++RE++V +ER+FTDDKVRQ+I+ KR+VC E   +SFV+INQKGIDPLSLDM AKEGILALRRAKRRNMER+TLACGG+PINS +D+ E MLG+AG+VYEQTLGEE+YTFVEDV+H +SCTILIKGPN+HTI QIKDA+RDG+RAV NA+EDK +VPG  +FE+AA+  L  +K  V G+ KLGV AFA+ALLV+PK LAENSG DVQDTLIA+ EEH  +G+AVG+D+ +GE M P   G+WDNYRVKRQ +HLAT LA+QLL+VDEVMRAG+QMG   GGG
Sbjct:    4 RGMNPNAEIVSKSQALMVNVSAAKGLQGVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAALIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLADGLHPRILSEGFEMAKDEALRVLDSLKITPEEILKDRELLCSVARTSLRTKLDQKLADQLTEIITDAVLTIAVPERP-IDLHMIEIMHMMHQSSSDTRLVKGLVLDHGSRHPDMPTSLENCYIMTCNVSLEYEKSEVNSGFFYNSADQREKMVEAERKFTDDKVRQIIELKREVCTEENKKSFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERITLACGGMPINSTDDMDESMLGYAGKVYEQTLGEERYTFVEDVQHPKSCTILIKGPNEHTIAQIKDAIRDGVRAVNNAVEDKGVVPGAAAFELAANEALNKFKGMVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVQEEHQNSGMAVGIDLFSGEPMLPEQEGIWDNYRVKRQFIHLATTLASQLLLVDEVMRAGKQMG---GGG 535          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|635371700|emb|CCI40203.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 791.186 bits (2042), Expect = 0.000e+0
Identity = 371/522 (71.07%), Postives = 447/522 (85.63%), Query Frame = 0
Query:   13 EIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLSQ-GPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKE--GESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMG 531
            E V KSQALLVN SAAKGLQ+VLKSNLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTASLIAR ATAQDD+TGDGTT++VL +GELLKQAERFL++GLHPR+++EG++LAKD+ L  LD  K A P+I  DRE+L S+A+TSLRTKL A++AD++TE VTDAVLT+++    +DLHM+EIMHM H+  SD+R V+GLVLDHG+RHPDMP  L  C I TCN+S EYEKSEV SGFFY++A++RE++V +ER+FTDDKVRQ+I+ KR+VC +   ++FV+INQKGIDPLSLDM AKEGILALRRAKRRNMERLTLACGG+ INS +D+   MLG+A RV+E+TLGEE+YTFVEDV+H +SCTILIKGPN+HTI QIKDALRDG+RAV NAIED+A+VPG G+FE+ A   LQ YK+ V G+ KLGV AFA+ALL++PK LAENSGFD+QDTLIAL EEH  +G  VGLD+ TGE M P   G+WDNYRVKRQ +HLAT LA+QLL+VDEVMR+G+  G
Sbjct:    4 EAVGKSQALLVNVSAAKGLQSVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTASLIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLTDGLHPRILSEGFELAKDKALSVLDAIKTALPDIAKDREMLCSVAKTSLRTKLDAKLADQLTEIVTDAVLTIARPNRAVDLHMIEIMHMQHQSSSDTRLVKGLVLDHGSRHPDMPNYLENCFIMTCNISLEYEKSEVTSGFFYNSAKQREQMVEAERKFTDDKVRQIIELKRQVCTDENKKNFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMAINSTDDMDASMLGFAARVHEETLGEERYTFVEDVQHPQSCTILIKGPNEHTIAQIKDALRDGIRAVNNAIEDRAVVPGAGAFELTAHEALQQYKKTVKGRAKLGVQAFADALLIIPKVLAENSGFDIQDTLIALQEEHCNSGEPVGLDLYTGEPMLPGQEGIWDNYRVKRQFIHLATALASQLLLVDEVMRSGKSSG 525          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|566011434|gb|ETI34345.1| (T-complex protein 1, zeta subunit [Phytophthora parasitica P1569] >gi|568036960|gb|ETM34559.1| T-complex protein 1, zeta subunit [Phytophthora parasitica])

HSP 1 Score: 788.875 bits (2036), Expect = 0.000e+0
Identity = 382/536 (71.27%), Postives = 460/536 (85.82%), Query Frame = 0
Query:    6 RLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLS--QGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKE--GESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVAGGG 537
            R +NP+AEIVSKSQAL+VN SA+KGLQ VLKSNLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTA+LIAR ATAQDD+TGDGTT++VL +GELLKQAERFL++GLHPR+++EG++LAKD VL  LD  K+   +I  DRELL S+ARTSLRTKL  ++AD++TE +TDAVLT++  + P IDLHM+EIMHM H+  SD+R V+GLVLDHG+RHPDMP +L  C+I TCNVS EYEKSEV SGFFY++A++RE++V +ER+FTDDKVRQ+I+ KR+VC E   +SFV+INQKGIDPLSLDM AKEGILALRRAKRRNMER+TLACGG+PINS +D+ E MLG+AG+VYEQTLGEE+YTFVEDV+H +SCTILIKGPN+HTI QIKDA+RDG+RAV NAIEDK +VPG  +FE+AA   L  +K  V G+ KLGV AFA+ALLV+PK LAENSG DVQDTLIA+ EEH  +G+ VG+D+ +GE M P   G+WDNYRVKRQ +HLAT LA+QLL+VDEVMRAG+QMG   GGG
Sbjct:    4 RGMNPNAEIVSKSQALMVNVSASKGLQGVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAALIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLADGLHPRILSEGFELAKDEVLRVLDGMKITPEDILKDRELLCSVARTSLRTKLDQKLADQLTEIITDAVLTIAVPERP-IDLHMIEIMHMMHQSSSDTRLVKGLVLDHGSRHPDMPTSLENCYIMTCNVSLEYEKSEVNSGFFYNSADQREKMVEAERKFTDDKVRQIIELKREVCTEENKKSFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERITLACGGMPINSTDDMDESMLGYAGKVYEQTLGEERYTFVEDVQHPKSCTILIKGPNEHTIAQIKDAIRDGVRAVNNAIEDKGVVPGAAAFELAAHEALNKFKGTVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVQEEHQNSGMPVGIDLFSGEPMLPEQEGIWDNYRVKRQFIHLATTLASQLLLVDEVMRAGKQMG---GGG 535          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|675176241|ref|XP_008897005.1| (T-complex protein 1, zeta subunit [Phytophthora parasitica INRA-310] >gi|567948954|gb|ETK74690.1| T-complex protein 1, zeta subunit [Phytophthora parasitica] >gi|567977612|gb|ETL28110.1| T-complex protein 1, zeta subunit [Phytophthora parasitica] >gi|568007102|gb|ETL81347.1| T-complex protein 1, zeta subunit [Phytophthora parasitica] >gi|568102772|gb|ETN17443.1| T-complex protein 1, zeta subunit [Phytophthora parasitica INRA-310] >gi|570315175|gb|ETO63123.1| T-complex protein 1, zeta subunit [Phytophthora parasitica P1976] >gi|570938993|gb|ETP04250.1| T-complex protein 1, zeta subunit [Phytophthora parasitica CJ01A1] >gi|570969243|gb|ETP32362.1| T-complex protein 1, zeta subunit [Phytophthora parasitica P10297] >gi|970639300|gb|KUF82419.1| T-complex protein 1 subunit zeta [Phytophthora nicotianae] >gi|970657847|gb|KUF95681.1| adenosylcobalamin-dependent ribonucleoside-triphosphate reductase [Phytophthora nicotianae])

HSP 1 Score: 788.104 bits (2034), Expect = 0.000e+0
Identity = 381/536 (71.08%), Postives = 460/536 (85.82%), Query Frame = 0
Query:    6 RLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLS--QGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKE--GESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVAGGG 537
            R +NP+AEIVSKSQAL+VN SA+KGLQ VLKSNLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTA+LIAR ATAQDD+TGDGTT++VL +GELLKQAERFL++GLHPR+++EG++LAKD VL  LD  K+   +I  DRELL S+ARTSLRTKL  ++AD++TE +TDAVLT++  + P IDLHM+EIMHM H+  SD+R V+GLVLDHG+RHPDMP +L  C+I TCNVS EYEKSEV SGFFY++A++RE++V +ER+FTDDKVRQ+I+ KR+VC E   +SFV+INQKGIDPLSLDM AKEGILALRRAKRRNMER+TLACGG+PINS +D+ E MLG+AG+VYEQTLGEE+YTFVEDV+H +SCTILIKGPN+HTI QIKDA+RDG+RAV NA+EDK +VPG  +FE+AA   L  +K  V G+ KLGV AFA+ALLV+PK LAENSG DVQDTLIA+ EEH  +G+ VG+D+ +GE M P   G+WDNYRVKRQ +HLAT LA+QLL+VDEVMRAG+QMG   GGG
Sbjct:    4 RGMNPNAEIVSKSQALMVNVSASKGLQGVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAALIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLADGLHPRILSEGFELAKDEVLRVLDGMKITPEDILKDRELLCSVARTSLRTKLDQKLADQLTEIITDAVLTIAVPERP-IDLHMIEIMHMMHQSSSDTRLVKGLVLDHGSRHPDMPTSLENCYIMTCNVSLEYEKSEVNSGFFYNSADQREKMVEAERKFTDDKVRQIIELKREVCTEENKKSFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERITLACGGMPINSTDDMDESMLGYAGKVYEQTLGEERYTFVEDVQHPKSCTILIKGPNEHTIAQIKDAIRDGVRAVNNAVEDKGVVPGAAAFELAAHEALNKFKGTVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVQEEHQNSGMPVGIDLFSGEPMLPEQEGIWDNYRVKRQFIHLATTLASQLLLVDEVMRAGKQMG---GGG 535          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|325180821|emb|CCA15232.1| (unnamed protein product putative [Albugo laibachii Nc14])

HSP 1 Score: 786.949 bits (2031), Expect = 0.000e+0
Identity = 371/522 (71.07%), Postives = 445/522 (85.25%), Query Frame = 0
Query:   13 EIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTL-SQGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKE--GESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMG 531
            E V KSQALLVN SAAKGLQ VLKSNLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTASLIAR ATAQDD+TGDGTT++VL +GELLKQAERFL++GLHPR+++EG++LAKD+ L  LD+ K + P+I  DRE+L S+A+TSLRTKL A++AD+MTE VTDAVLT+ S    +DLHM+EI+HM H+  SD+R V+GLVLDHG+RHPDMP     C I TCNVS EYEKSEV SGFFY++A++RE++V +ER+FTDDKVRQ+I+ KR+VC +   ++FV+INQKGIDPLSLDM AKEGILALRRAKRRNMERLTLACGG+ INS +D+   MLG+A RV+E+TLGEE+YTFVEDV+H +SCTILIKGPN+HTI QIKDALRDG+RAV NAIED+A+VPG G+FE+ A   LQ YK+ V G+ KLGV AFA+ALLV+PK LAENSG D+QDTLIA+ EEH  +G AVGL++ TGE M P   GVWDNYRVKRQ +HLAT LA+QLL+VDEVMR+G+  G
Sbjct:    4 EAVGKSQALLVNVSAAKGLQGVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTASLIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLTDGLHPRILSEGFELAKDKALSVLDSIKTSLPDIMQDREMLCSVAKTSLRTKLDAKLADQMTEIVTDAVLTIASPNRPVDLHMIEILHMQHQSSSDTRLVKGLVLDHGSRHPDMPNYSENCFIMTCNVSLEYEKSEVTSGFFYNSAKQREQMVEAERKFTDDKVRQIIELKRQVCTDENKKNFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMAINSTDDMDASMLGFAARVHEETLGEERYTFVEDVQHPQSCTILIKGPNEHTIAQIKDALRDGIRAVNNAIEDRAVVPGAGAFELTAHEALQQYKKTVKGRAKLGVQAFADALLVIPKVLAENSGLDIQDTLIAVQEEHCNSGEAVGLNLYTGEPMLPGQEGVWDNYRVKRQFIHLATALASQLLLVDEVMRSGKSSG 525          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|695383890|ref|XP_009517844.1| (hypothetical protein PHYSODRAFT_553558 [Phytophthora sojae] >gi|348690755|gb|EGZ30569.1| hypothetical protein PHYSODRAFT_553558 [Phytophthora sojae])

HSP 1 Score: 785.793 bits (2028), Expect = 0.000e+0
Identity = 378/528 (71.59%), Postives = 454/528 (85.98%), Query Frame = 0
Query:    6 RLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLS--QGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKE--GESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQ 529
            R +NP+AEIVSKSQAL+VN SAAKGLQ VLKSNLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTA+LIAR ATAQDD+TGDGTT++VL +GELLKQAERFL++GLHPR+++EG++LAKD  L  LDT K    +I  DRELL S+ARTSLRTKL  ++AD++TE +TDAVLT++  + P IDLHM+EIMHM H+  SD+R V+GLVLDHG+RHPDMP +L  C+I TCNVS EYEKSEV SGFFY++AE+RE++V +ER+FTDDKVRQ+I+ KR+VC E  G+SFV+INQKGIDPLSLDM AKEGILALRRAKRRNMER+TLACGG+PINS +D+ E MLG+AG+VYEQTLGEE+YTFVEDV+H +SCTILIKGPN+HTI QIKDA+RDG+RAV NA+EDK +VPG  +FE+ A   L  +K  V G+ KLGV AFA+ALLV+PK LAENSG DVQDTLIA+ EEH  +G+ VG+D+ +GE M P   G+WDNYRVKRQ +HLAT LA+QLL+VDEVMRAG+Q
Sbjct:    4 RGMNPNAEIVSKSQALMVNVSAAKGLQGVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAALIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLADGLHPRILSEGFELAKDEALRVLDTMKTTPEDILKDRELLCSVARTSLRTKLDQKLADQLTEIITDAVLTIAVPERP-IDLHMIEIMHMMHQSSSDTRLVKGLVLDHGSRHPDMPTSLENCYIMTCNVSLEYEKSEVNSGFFYNSAEQREKMVEAERKFTDDKVRQIIELKREVCTEENGKSFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERITLACGGMPINSTDDMDESMLGYAGKVYEQTLGEERYTFVEDVQHPKSCTILIKGPNEHTIAQIKDAIRDGVRAVNNAVEDKGVVPGAAAFELTAHEALNKFKGTVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVQEEHQNSGMFVGIDLFSGEPMLPEQEGIWDNYRVKRQFIHLATTLASQLLLVDEVMRAGKQ 530          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|953491148|emb|CEG46007.1| (t-complex protein zeta subunit [Plasmopara halstedii])

HSP 1 Score: 785.408 bits (2027), Expect = 0.000e+0
Identity = 379/534 (70.97%), Postives = 457/534 (85.58%), Query Frame = 0
Query:    8 VNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLS--QGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKE--GESFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGRVAGGG 537
            +NP+AEIV KSQAL+VN SA+KGLQ VLKSNLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTA+LIAR ATAQDD+TGDGTT++VL +GELLKQAERFL++GLHPR+++EG+++AKD  L  LD+ K    EI  DRELL S+ARTSLRTKL  ++AD++T+ +TDAVLT++  + P IDLHM+EIMHM H+  SD+R V+GLVLDHG+RHPDMP +L  C+I TCNVS EYEKSEV SGFFY++A++RE++V +ER+FTDDKVRQ+ID KR+VC E   ++FVVINQKGIDPLSLDM AKEGILALRRAKRRNMER+TLACGG+PINS ED+ E MLG+AG+VYEQTLGEE+YTFVEDV+H +SCT+LIKGPN+HTI QIKDA+RDG+RAV NAIEDK +VPG G+FE+AA   L   K  V G+ KLGV AFA+ALLV+PK LAENSG DVQDTLIA+ EEH  +G+ VG+D+ +GE M P   G+WDNYRVKRQ +HLAT LA+QLL+VDEVMRAG+QM   +GGG
Sbjct:    1 MNPNAEIVGKSQALMVNVSASKGLQGVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAALIARAATAQDDVTGDGTTSTVLFIGELLKQAERFLADGLHPRILSEGFEIAKDEALRVLDSIKTVNKEILKDRELLCSVARTSLRTKLDQKLADQLTDIITDAVLTIAVPERP-IDLHMIEIMHMMHQSSSDTRLVKGLVLDHGSRHPDMPTSLENCYIMTCNVSLEYEKSEVNSGFFYNSADQREKMVEAERKFTDDKVRQIIDLKREVCTEENKKTFVVINQKGIDPLSLDMLAKEGILALRRAKRRNMERITLACGGMPINSTEDMDESMLGYAGKVYEQTLGEERYTFVEDVQHPKSCTVLIKGPNEHTIAQIKDAIRDGVRAVNNAIEDKGVVPGAGAFELAAHEALNKLKGMVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVQEEHQNSGMPVGIDLFSGEPMLPEQEGIWDNYRVKRQFIHLATTLASQLLLVDEVMRAGKQM---SGGG 530          
BLAST of EWM20929.1 vs. NCBI_GenBank
Match: gi|673034960|ref|XP_008871441.1| (T-complex protein 1, zeta subunit [Aphanomyces invadans] >gi|574472661|gb|ETV99665.1| T-complex protein 1, zeta subunit [Aphanomyces invadans])

HSP 1 Score: 783.482 bits (2022), Expect = 0.000e+0
Identity = 374/533 (70.17%), Postives = 456/533 (85.55%), Query Frame = 0
Query:    3 AATRLVNPSAEIVSKSQALLVNCSAAKGLQNVLKSNLGPRGTLKMLVGGAGQIKITKDGNVLLHEMQIQHPTASLIARTATAQDDITGDGTTTSVLLVGELLKQAERFLSEGLHPRVIAEGYDLAKDRVLEFLDTFKVAQPEIKHDRELLLSIARTSLRTKLAAEMADRMTEAVTDAVLTLS-QGPTIDLHMVEIMHMTHKLGSDSRFVRGLVLDHGARHPDMPKALNRCHIFTCNVSFEYEKSEVASGFFYSNAEERERLVASERRFTDDKVRQVIDFKRKVCKEGE--SFVVINQKGIDPLSLDMFAKEGILALRRAKRRNMERLTLACGGLPINSVEDLSEDMLGWAGRVYEQTLGEEKYTFVEDVRHARSCTILIKGPNQHTIDQIKDALRDGLRAVKNAIEDKALVPGGGSFEVAASHMLQTYKEAVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATILATQLLVVDEVMRAGRQMGR 532
            ++ R VNP+AE+V++SQALLVN SAA+GLQ VLKSNLGPRGTLKMLVGGAGQIK+TKDGNVLLHEMQIQHPTA++IAR ATAQDDITGDGTT+SVL  GELLKQAERFLS+GLHPR++AEG++LA++  L  LD  KV +P + HDRELL S+ARTSLRTKL  ++AD++TE VTDAVLT++  G  +DLHM+EIMHM H+  +D+R ++GLVLDHG+RHPDMP  L+ C+I TCNVS EYEKSEV SGFFY++AE+RE++V +ER+FTDDKV+Q+I+ KR VC E    +FV+INQKGIDPLSLDM AKEGILALRRAKRRNMERLTLACGG+ INS +D+   MLGWAG+VYEQTLGE+ YTFVEDVRH +SC+ILIKGPN+HTI QIKDA+RDG+RAV N +ED ++VPGGG++E+AA   L  +K+ +SG+ KLGV AFA+ALL++PK LAENSG DVQD L+A LEE AK+G AVGLD+ +G+ M P   G+ DNYRVKRQ +HLAT LA+QLL+VDEVMRAGRQMG+
Sbjct:    2 SSVRTVNPNAEVVARSQALLVNVSAARGLQGVLKSNLGPRGTLKMLVGGAGQIKLTKDGNVLLHEMQIQHPTAAVIARAATAQDDITGDGTTSSVLFTGELLKQAERFLSDGLHPRILAEGFELAREEALRVLDKIKVEKPNLLHDRELLTSVARTSLRTKLDQQLADQLTEIVTDAVLTIAVPGRPVDLHMIEIMHMVHQSAADTRLIKGLVLDHGSRHPDMPSELDNCYIMTCNVSLEYEKSEVNSGFFYNSAEQREKMVEAERKFTDDKVKQIIELKRHVCTEENKANFVIINQKGIDPLSLDMLAKEGILALRRAKRRNMERLTLACGGMAINSTDDMDVSMLGWAGKVYEQTLGEDSYTFVEDVRHPQSCSILIKGPNEHTIAQIKDAVRDGIRAVNNTLEDASVVPGGGAYELAAHRALYAFKDTISGRAKLGVQAFADALLIIPKVLAENSGLDVQDALLACLEEGAKSGEAVGLDLFSGQPMLPLQEGILDNYRVKRQFIHLATALASQLLLVDEVMRAGRQMGK 534          
The following BLAST results are available for this feature:
BLAST of EWM20929.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585100885|gb|EWM20929.1|0.000e+0100.00t-complex protein 1 subunit zeta isoform a [Nannoc... [more]
gi|299115943|emb|CBN75950.1|0.000e+073.96conserved unknown protein [Ectocarpus siliculosus][more]
gi|1214703203|gb|OWZ15261.1|0.000e+071.27T-complex protein 1, zeta subunit [Phytophthora me... [more]
gi|635371700|emb|CCI40203.1|0.000e+071.07unnamed protein product [Albugo candida][more]
gi|566011434|gb|ETI34345.1|0.000e+071.27T-complex protein 1, zeta subunit [Phytophthora pa... [more]
gi|675176241|ref|XP_008897005.1|0.000e+071.08T-complex protein 1, zeta subunit [Phytophthora pa... [more]
gi|325180821|emb|CCA15232.1|0.000e+071.07unnamed protein product putative [Albugo laibachii... [more]
gi|695383890|ref|XP_009517844.1|0.000e+071.59hypothetical protein PHYSODRAFT_553558 [Phytophtho... [more]
gi|953491148|emb|CEG46007.1|0.000e+070.97t-complex protein zeta subunit [Plasmopara halsted... [more]
gi|673034960|ref|XP_008871441.1|0.000e+070.17T-complex protein 1, zeta subunit [Aphanomyces inv... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9761rna9761Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications