EWM20976.1, cds9700 (CDS) Nannochloropsis gaditana

Overview
NameEWM20976.1
Unique Namecds9700
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037255.1:283099..283451 +
Alignment locationKK037255.1:283676..283697 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM20976.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100442g5.7161.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037255.1supercontigKK037255.1:283099..283451 +
KK037255.1supercontigKK037255.1:283676..283697 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM20976.1 vs. NCBI_GenBank
Match: gi|585100962|gb|EWM20976.1| (hypothetical protein Naga_100442g5 [Nannochloropsis gaditana])

HSP 1 Score: 244.973 bits (624), Expect = 4.381e-82
Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0 
Query:    1 MILPRIRRKPGPAPALRVFNAWFCRGHLPFLLLLPFLLTLLPPGASSFFLTPTTRCLSGTPSPFLDDINGSGTSFLAIATDRHGEIRGEGGRGRSGKRAWGRQDSVRRPLFKKPSQRRLRTQDA 124
            MILPRIRRKPGPAPALRVFNAWFCRGHLPFLLLLPFLLTLLPPGASSFFLTPTTRCLSGTPSPFLDDINGSGTSFLAIATDRHGEIRGEGGRGRSGKRAWGRQDSVRRPLFKKPSQRRLRTQDA
Sbjct:    1 MILPRIRRKPGPAPALRVFNAWFCRGHLPFLLLLPFLLTLLPPGASSFFLTPTTRCLSGTPSPFLDDINGSGTSFLAIATDRHGEIRGEGGRGRSGKRAWGRQDSVRRPLFKKPSQRRLRTQDA 124
The following BLAST results are available for this feature:
BLAST of EWM20976.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585100962|gb|EWM20976.1|4.381e-82100.00hypothetical protein Naga_100442g5 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna9731rna9731Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications